RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
PDE4D-210ENST00000503258 TERF2IPQ9NYB0 399 aa11.08□□□□□ -0.64
PDE4D-210ENST00000503258 NRXN2Q9P2S2 1712 aa11.08□□□□□ -0.64
PDE4D-210ENST00000503258 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
PDE4D-210ENST00000503258 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
PDE4D-210ENST00000503258 HDGFL2Q7Z4V5 671 aaPredicted RBP11.08□□□□□ -0.64
PDE4D-210ENST00000503258 INSRP06213 1382 aa11.07□□□□□ -0.64
PDE4D-210ENST00000503258 WDR90Q96KV7 1748 aa11.07□□□□□ -0.64
PDE4D-210ENST00000503258 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
PDE4D-210ENST00000503258 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
PDE4D-210ENST00000503258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDE4D-210ENST00000503258 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-210ENST00000503258 C4AP0C0L4 1744 aa11.06□□□□□ -0.64
PDE4D-210ENST00000503258 ANKRD24Q8TF21 1146 aa11.06□□□□□ -0.64
PDE4D-210ENST00000503258 A0A1W2PP64 1363 aa11.06□□□□□ -0.64
PDE4D-210ENST00000503258 MEGF6O75095 1541 aa11.06□□□□□ -0.64
PDE4D-210ENST00000503258 SMARCC1Q92922 1105 aaPredicted RBP11.05□□□□□ -0.64
PDE4D-210ENST00000503258 NUTM2GQ5VZR2 741 aa11.04□□□□□ -0.64
PDE4D-210ENST00000503258 LRRC4BQ9NT99 713 aa11.04□□□□□ -0.64
PDE4D-210ENST00000503258 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
PDE4D-210ENST00000503258 ATP10DQ9P241 1426 aa11.03□□□□□ -0.64
PDE4D-210ENST00000503258 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
PDE4D-210ENST00000503258 ZBTB7AO95365 584 aa11.03□□□□□ -0.64
PDE4D-210ENST00000503258 L3MBTL2Q969R5 705 aa11.03□□□□□ -0.64
PDE4D-210ENST00000503258 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
PDE4D-210ENST00000503258 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
PDE4D-210ENST00000503258 PTF1AQ7RTS3 328 aa11.02□□□□□ -0.64
PDE4D-210ENST00000503258 USP35Q9P2H5 1018 aa11.02□□□□□ -0.64
PDE4D-210ENST00000503258 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
PDE4D-210ENST00000503258 KDRP35968 1356 aa11.02□□□□□ -0.65
PDE4D-210ENST00000503258 SSFA2P28290 1259 aa11.02□□□□□ -0.65
PDE4D-210ENST00000503258 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
PDE4D-210ENST00000503258 HOXC9P31274 260 aa11.01□□□□□ -0.65
PDE4D-210ENST00000503258 FLT4P35916 1363 aa11□□□□□ -0.65
PDE4D-210ENST00000503258 ZCRB1Q8TBF4 217 aaKnown RBP11□□□□□ -0.65
PDE4D-210ENST00000503258 USP47Q96K76 1375 aa11□□□□□ -0.65
PDE4D-210ENST00000503258 KDM6AO15550 1401 aaPredicted RBP11□□□□□ -0.65
PDE4D-210ENST00000503258 TJP1Q07157 1748 aa11□□□□□ -0.65
PDE4D-210ENST00000503258 MRC1P22897 1456 aa10.99□□□□□ -0.65
PDE4D-210ENST00000503258 HSPA6P17066 643 aa10.99□□□□□ -0.65
PDE4D-210ENST00000503258 ADRA2BP18089 450 aa10.99□□□□□ -0.65
PDE4D-210ENST00000503258 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
PDE4D-210ENST00000503258 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
PDE4D-210ENST00000503258 RC3H1Q5TC82 1133 aaKnown RBP10.99□□□□□ -0.65
PDE4D-210ENST00000503258 PDGFDQ9GZP0 370 aaPredicted RBP10.99□□□□□ -0.65
PDE4D-210ENST00000503258 TGFB2P61812 414 aa10.98□□□□□ -0.65
PDE4D-210ENST00000503258 TESK2Q96S53 571 aa10.98□□□□□ -0.65
PDE4D-210ENST00000503258 APLP1P51693 650 aa10.98□□□□□ -0.65
PDE4D-210ENST00000503258 SCN11AQ9UI33 1791 aa10.97□□□□□ -0.65
PDE4D-210ENST00000503258 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
PDE4D-210ENST00000503258 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
PDE4D-210ENST00000503258 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
PDE4D-210ENST00000503258 GPR162Q16538 588 aa10.96□□□□□ -0.66
PDE4D-210ENST00000503258 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.66
PDE4D-210ENST00000503258 PALLDQ8WX93 1383 aa10.96□□□□□ -0.66
PDE4D-210ENST00000503258 CNTNAP4Q9C0A0 1308 aa10.95□□□□□ -0.66
PDE4D-210ENST00000503258 FSTL1Q12841 308 aa10.95□□□□□ -0.66
PDE4D-210ENST00000503258 NME9Q86XW9 330 aa10.95□□□□□ -0.66
PDE4D-210ENST00000503258 COL23A1Q86Y22 540 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-210ENST00000503258 JMYQ8N9B5 988 aa10.95□□□□□ -0.66
PDE4D-210ENST00000503258 COG3Q96JB2 828 aa10.95□□□□□ -0.66
PDE4D-210ENST00000503258 DICER1Q9UPY3 1922 aaKnown RBP10.95□□□□□ -0.66
PDE4D-210ENST00000503258 YBX3P16989 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDE4D-210ENST00000503258 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
PDE4D-210ENST00000503258 CCNL1Q9UK58 526 aaPredicted RBP10.95□□□□□ -0.66
PDE4D-210ENST00000503258 SBF1O95248 1867 aa10.94□□□□□ -0.66
PDE4D-210ENST00000503258 THSD7BQ9C0I4 1608 aa10.93□□□□□ -0.66
PDE4D-210ENST00000503258 TATP17735 454 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-210ENST00000503258 TFCP2L1Q9NZI6 479 aa10.93□□□□□ -0.66
PDE4D-210ENST00000503258 WASHC2AQ641Q2 1341 aa10.92□□□□□ -0.66
PDE4D-210ENST00000503258 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
PDE4D-210ENST00000503258 SCN7AQ01118 1682 aa10.92□□□□□ -0.66
PDE4D-210ENST00000503258 VIRMAQ69YN4 1812 aaKnown RBP10.91□□□□□ -0.66
PDE4D-210ENST00000503258 RGL2O15211 777 aa10.91□□□□□ -0.66
PDE4D-210ENST00000503258 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
PDE4D-210ENST00000503258 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
PDE4D-210ENST00000503258 KIF3CO14782 793 aa10.91□□□□□ -0.66
PDE4D-210ENST00000503258 NLGN2Q8NFZ4 835 aa10.91□□□□□ -0.66
PDE4D-210ENST00000503258 N4BP2Q86UW6 1770 aaPredicted RBP10.9□□□□□ -0.66
PDE4D-210ENST00000503258 SIPA1L3O60292 1781 aaPredicted RBP10.9□□□□□ -0.66
PDE4D-210ENST00000503258 ERVV-2B6SEH9 535 aa10.9□□□□□ -0.66
PDE4D-210ENST00000503258 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.67
PDE4D-210ENST00000503258 ACSBG1Q96GR2 724 aa10.9□□□□□ -0.67
PDE4D-210ENST00000503258 SPG7Q9UQ90 795 aa10.9□□□□□ -0.67
PDE4D-210ENST00000503258 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
PDE4D-210ENST00000503258 CARD11Q9BXL7 1154 aa10.89□□□□□ -0.67
PDE4D-210ENST00000503258 KAT6BQ8WYB5 2073 aa10.89□□□□□ -0.67
PDE4D-210ENST00000503258 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
PDE4D-210ENST00000503258 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
PDE4D-210ENST00000503258 CLSPNQ9HAW4 1339 aa10.88□□□□□ -0.67
PDE4D-210ENST00000503258 TOMM70O94826 608 aa10.88□□□□□ -0.67
PDE4D-210ENST00000503258 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
PDE4D-210ENST00000503258 FYB1O15117 783 aa10.87□□□□□ -0.67
PDE4D-210ENST00000503258 IGSF1Q8N6C5 1336 aa10.87□□□□□ -0.67
PDE4D-210ENST00000503258 NBPF6Q5VWK0 638 aa10.87□□□□□ -0.67
PDE4D-210ENST00000503258 NLGN1Q8N2Q7 840 aa10.87□□□□□ -0.67
PDE4D-210ENST00000503258 NBPF4Q96M43 638 aa10.87□□□□□ -0.67
PDE4D-210ENST00000503258 SLC12A5Q9H2X9 1139 aa10.87□□□□□ -0.67
PDE4D-210ENST00000503258 GPBP1L1Q9HC44 474 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-210ENST00000503258 AMPHP49418 695 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms