RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 MRFAP1L1Q96HT8 127 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 TGIF2Q9GZN2 237 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 SPC25Q9HBM1 224 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 PRC1O43663 620 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 FAM69CQ0P6D2 419 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
SUB1-202ENST00000502453 PXYLP1Q8TE99 480 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 CLP1Q92989 425 aaKnown RBP4.88□□□□□ -1.63
SUB1-202ENST00000502453 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.88□□□□□ -1.63
SUB1-202ENST00000502453 GIGYF1O75420 1035 aaPredicted RBP4.88□□□□□ -1.63
SUB1-202ENST00000502453 USP5P45974 858 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 FANCCQ00597 558 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 NLRP2Q9NX02 1062 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 CCDC85CA6NKD9 419 aa4.87□□□□□ -1.63
SUB1-202ENST00000502453 DDX11L8A8MPP1 907 aa4.87□□□□□ -1.63
SUB1-202ENST00000502453 LZTS3O60299 673 aaPredicted RBP4.87□□□□□ -1.63
SUB1-202ENST00000502453 MTA3Q9BTC8 594 aa4.87□□□□□ -1.63
SUB1-202ENST00000502453 GNL3LQ9NVN8 582 aaKnown RBP4.87□□□□□ -1.63
SUB1-202ENST00000502453 RPS6KL1Q9Y6S9 549 aa4.87□□□□□ -1.63
SUB1-202ENST00000502453 EVI5O60447 810 aa4.87□□□□□ -1.63
SUB1-202ENST00000502453 ICMTO60725 284 aa4.87□□□□□ -1.63
SUB1-202ENST00000502453 SAFB2Q14151 953 aaKnown RBP eCLIP4.87□□□□□ -1.63
SUB1-202ENST00000502453 CHMP4BQ9H444 224 aaKnown RBP4.87□□□□□ -1.63
SUB1-202ENST00000502453 FAM196BA6NMK8 535 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 GABBR2O75899 941 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 DPYDQ12882 1025 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 PADI6Q6TGC4 694 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 DUSP9Q99956 384 aaKnown RBP4.86□□□□□ -1.63
SUB1-202ENST00000502453 OCEL1Q9H607 264 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 PARP2Q9UGN5 583 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 PTGER2P43116 358 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 SEPT3Q9UH03 358 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 K7ELQ4 463 aaPredicted RBP4.86□□□□□ -1.63
SUB1-202ENST00000502453 FMNL1O95466 1100 aaPredicted RBP4.86□□□□□ -1.63
SUB1-202ENST00000502453 NCOA4Q13772 614 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 ZNF394Q53GI3 561 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 ZBTB3Q9H5J0 574 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 PPP1R12AO14974 1030 aaPredicted RBP4.86□□□□□ -1.63
SUB1-202ENST00000502453 SORBS3O60504 671 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 PTK7Q13308 1070 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 GTF3C2Q8WUA4 911 aaPredicted RBP4.86□□□□□ -1.63
SUB1-202ENST00000502453 TSR2Q969E8 191 aaKnown RBP4.86□□□□□ -1.63
SUB1-202ENST00000502453 MAF1Q9H063 256 aa4.86□□□□□ -1.63
SUB1-202ENST00000502453 KCNH2Q12809 1159 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 ANKMY2Q8IV38 441 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 SLC43A3Q8NBI5 491 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 PNMA1Q8ND90 353 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 PSMD2Q13200 908 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 NR6A1Q15406 480 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 FERMT3Q86UX7 667 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.85□□□□□ -1.63
SUB1-202ENST00000502453 COMMD10Q9Y6G5 202 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 ADGRG1Q9Y653 693 aa4.85□□□□□ -1.63
SUB1-202ENST00000502453 C21orf2O43822 256 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 LDHBP07195 334 aaKnown RBP4.84□□□□□ -1.63
SUB1-202ENST00000502453 NEFMP07197 916 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 RBL2Q08999 1139 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 PPP4R4Q6NUP7 873 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 SFMBT1Q9UHJ3 866 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 EVA1CP58658 441 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 EN1Q05925 392 aaPredicted RBP4.84□□□□□ -1.63
SUB1-202ENST00000502453 MAP9Q49MG5 647 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 CLEC4GQ6UXB4 293 aa4.84□□□□□ -1.63
SUB1-202ENST00000502453 TTF2Q9UNY4 1162 aaKnown RBP4.84□□□□□ -1.63
SUB1-202ENST00000502453 CHMP4BP1P59074 171 aa4.84□□□□□ -1.64
SUB1-202ENST00000502453 RGL4Q8IZJ4 473 aa4.84□□□□□ -1.64
SUB1-202ENST00000502453 PTMAP06454 111 aaKnown RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 AMPD3Q01432 767 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 GUCA2AQ02747 115 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 SOGA3Q5TF21 947 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 FAM174AQ8TBP5 190 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 ARMC5Q96C12 935 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 IER2Q9BTL4 223 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 PDGFRBP09619 1106 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 PAF1Q8N7H5 531 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 SRPK1Q96SB4 655 aaKnown RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 FBXO9Q9UK97 447 aaPredicted RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 DNMT3AQ9Y6K1 912 aaPredicted RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 TUSC1Q2TAM9 212 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 TMC7Q7Z402 723 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 OGFOD1Q8N543 542 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 CEP89Q96ST8 783 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 SLKQ9H2G2 1235 aaPredicted RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 GTF2E1P29083 439 aaPredicted RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 ARHGAP4P98171 946 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 CAPN12Q6ZSI9 719 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 VPS37DQ86XT2 251 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 MCF2L2Q86YR7 1114 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 RAVER1Q8IY67 606 aaKnown RBP4.83□□□□□ -1.64
SUB1-202ENST00000502453 KHSRPQ92945 711 aaKnown RBP eCLIP4.83□□□□□ -1.647e-7■■□□□ 11.6
SUB1-202ENST00000502453 BRINP2Q9C0B6 783 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 NEUROD4Q9HD90 331 aa4.83□□□□□ -1.64
SUB1-202ENST00000502453 ZNF500O60304 480 aaPredicted RBP4.82□□□□□ -1.64
SUB1-202ENST00000502453 LDHAP00338 332 aaKnown RBP4.82□□□□□ -1.64
SUB1-202ENST00000502453 BRD3Q15059 726 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 POTEJP0CG39 1038 aa4.82□□□□□ -1.64
SUB1-202ENST00000502453 XRCC5P13010 732 aaKnown RBP4.82□□□□□ -1.64
SUB1-202ENST00000502453 CD46P15529 392 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms