RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 ERFEQ4G0M1 354 aa10.47□□□□□ -0.73
CRNDE-201ENST00000501177 VASH1Q7L8A9 365 aaPredicted RBP10.47□□□□□ -0.73
CRNDE-201ENST00000501177 FBXO41Q8TF61 875 aa10.47□□□□□ -0.73
CRNDE-201ENST00000501177 DDRGK1Q96HY6 314 aa10.47□□□□□ -0.73
CRNDE-201ENST00000501177 MAP4K5Q9Y4K4 846 aa10.47□□□□□ -0.73
CRNDE-201ENST00000501177 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
CRNDE-201ENST00000501177 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.73
CRNDE-201ENST00000501177 OCSTAMPQ9BR26 566 aa10.46□□□□□ -0.73
CRNDE-201ENST00000501177 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
CRNDE-201ENST00000501177 H3BM21 787 aa10.45□□□□□ -0.74
CRNDE-201ENST00000501177 GMPRP36959 345 aa10.45□□□□□ -0.74
CRNDE-201ENST00000501177 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.745e-7■□□□□ 9.3
CRNDE-201ENST00000501177 FKBPLQ9UIM3 349 aa10.45□□□□□ -0.74
CRNDE-201ENST00000501177 WDR7Q9Y4E6 1490 aa10.44□□□□□ -0.74
CRNDE-201ENST00000501177 MEIOBQ8N635 442 aa10.44□□□□□ -0.74
CRNDE-201ENST00000501177 EPS8L1Q8TE68 723 aa10.44□□□□□ -0.74
CRNDE-201ENST00000501177 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 AP1G2O75843 785 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 PDXDC2PQ6P474 469 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 HMX1Q9NP08 348 aaPredicted RBP10.43□□□□□ -0.74
CRNDE-201ENST00000501177 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
CRNDE-201ENST00000501177 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
CRNDE-201ENST00000501177 ATP1B4Q9UN42 357 aaPredicted RBP10.42□□□□□ -0.74
CRNDE-201ENST00000501177 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
CRNDE-201ENST00000501177 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
CRNDE-201ENST00000501177 KIF21BO75037 1637 aa10.41□□□□□ -0.74
CRNDE-201ENST00000501177 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
CRNDE-201ENST00000501177 INSM1Q01101 510 aaPredicted RBP10.41□□□□□ -0.74
CRNDE-201ENST00000501177 CCDC116Q8IYX3 515 aa10.41□□□□□ -0.74
CRNDE-201ENST00000501177 ARHGAP9Q9BRR9 750 aa10.41□□□□□ -0.74
CRNDE-201ENST00000501177 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
CRNDE-201ENST00000501177 SLC24A1O60721 1099 aa10.4□□□□□ -0.74
CRNDE-201ENST00000501177 BMP2P12643 396 aa10.4□□□□□ -0.74
CRNDE-201ENST00000501177 LORP23490 312 aaPredicted RBP10.4□□□□□ -0.74
CRNDE-201ENST00000501177 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
CRNDE-201ENST00000501177 IRF7Q92985 503 aa10.39□□□□□ -0.75
CRNDE-201ENST00000501177 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
CRNDE-201ENST00000501177 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
CRNDE-201ENST00000501177 CBLBQ13191 982 aa10.38□□□□□ -0.75
CRNDE-201ENST00000501177 EMILIN1Q9Y6C2 1016 aa10.38□□□□□ -0.75
CRNDE-201ENST00000501177 SOS2Q07890 1332 aaPredicted RBP10.37□□□□□ -0.75
CRNDE-201ENST00000501177 MAN1A2O60476 641 aa10.37□□□□□ -0.75
CRNDE-201ENST00000501177 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
CRNDE-201ENST00000501177 KCTD15Q96SI1 283 aaPredicted RBP10.37□□□□□ -0.75
CRNDE-201ENST00000501177 DNMT3LQ9UJW3 386 aa10.37□□□□□ -0.75
CRNDE-201ENST00000501177 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
CRNDE-201ENST00000501177 RFC5P40937 340 aa10.36□□□□□ -0.75
CRNDE-201ENST00000501177 ZBTB33Q86T24 672 aa10.36□□□□□ -0.75
CRNDE-201ENST00000501177 SLC10A4Q96EP9 437 aa10.36□□□□□ -0.75
CRNDE-201ENST00000501177 ADAMTSL3P82987 1691 aa10.36□□□□□ -0.75
CRNDE-201ENST00000501177 ARAP3Q8WWN8 1544 aa10.36□□□□□ -0.75
CRNDE-201ENST00000501177 CTTNBP2Q8WZ74 1663 aa10.35□□□□□ -0.75
CRNDE-201ENST00000501177 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
CRNDE-201ENST00000501177 ADAM32Q8TC27 787 aa10.35□□□□□ -0.75
CRNDE-201ENST00000501177 UPP2O95045 317 aa10.34□□□□□ -0.75
CRNDE-201ENST00000501177 PTPRMP28827 1452 aa10.34□□□□□ -0.75
CRNDE-201ENST00000501177 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
CRNDE-201ENST00000501177 PTK2Q05397 1052 aa10.33□□□□□ -0.76
CRNDE-201ENST00000501177 Q6ZVU0 165 aa10.33□□□□□ -0.76
CRNDE-201ENST00000501177 TSEN34Q9BSV6 310 aaKnown RBP10.33□□□□□ -0.76
CRNDE-201ENST00000501177 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
CRNDE-201ENST00000501177 PHLDB1Q86UU1 1377 aa10.33□□□□□ -0.76
CRNDE-201ENST00000501177 GOLGA3Q08378 1498 aa10.33□□□□□ -0.76
CRNDE-201ENST00000501177 RAPGEF2Q9Y4G8 1499 aa10.33□□□□□ -0.76
CRNDE-201ENST00000501177 ABCA8O94911 1581 aa10.32□□□□□ -0.76
CRNDE-201ENST00000501177 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
CRNDE-201ENST00000501177 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
CRNDE-201ENST00000501177 BCORL1Q5H9F3 1711 aa10.32□□□□□ -0.76
CRNDE-201ENST00000501177 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
CRNDE-201ENST00000501177 PGPEP1Q9NXJ5 209 aa10.31□□□□□ -0.76
CRNDE-201ENST00000501177 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
CRNDE-201ENST00000501177 AGBL1Q96MI9 1066 aa10.3□□□□□ -0.76
CRNDE-201ENST00000501177 CDV3Q9UKY7 258 aaKnown RBP10.3□□□□□ -0.76
CRNDE-201ENST00000501177 LMTK3Q96Q04 1460 aa10.3□□□□□ -0.76
CRNDE-201ENST00000501177 TTLL8A6PVC2 850 aa10.29□□□□□ -0.76
CRNDE-201ENST00000501177 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
CRNDE-201ENST00000501177 GOPCQ9HD26 462 aa10.29□□□□□ -0.76
CRNDE-201ENST00000501177 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
CRNDE-201ENST00000501177 ABCA9Q8IUA7 1624 aa10.29□□□□□ -0.76
CRNDE-201ENST00000501177 MADDQ8WXG6 1647 aa10.29□□□□□ -0.76
CRNDE-201ENST00000501177 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
CRNDE-201ENST00000501177 SPINT1O43278 529 aa10.28□□□□□ -0.76
CRNDE-201ENST00000501177 ZSCAN1Q8NBB4 408 aa10.28□□□□□ -0.76
CRNDE-201ENST00000501177 RAB15P59190 212 aa10.27□□□□□ -0.77
CRNDE-201ENST00000501177 PCMTD1Q96MG8 357 aaPredicted RBP10.27□□□□□ -0.77
CRNDE-201ENST00000501177 NEO1Q92859 1461 aa10.27□□□□□ -0.77
CRNDE-201ENST00000501177 DHX9Q08211 1270 aaKnown RBP10.26□□□□□ -0.77
CRNDE-201ENST00000501177 ARHGEF40Q8TER5 1519 aa10.25□□□□□ -0.77
CRNDE-201ENST00000501177 CTSOP43234 321 aaPredicted RBP10.25□□□□□ -0.77
CRNDE-201ENST00000501177 BRPF1P55201 1214 aaPredicted RBP10.25□□□□□ -0.77
CRNDE-201ENST00000501177 RELBQ01201 579 aa10.25□□□□□ -0.77
CRNDE-201ENST00000501177 PTSQ03393 145 aa10.25□□□□□ -0.77
CRNDE-201ENST00000501177 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.25□□□□□ -0.77
CRNDE-201ENST00000501177 ZNF784Q8NCA9 323 aaPredicted RBP10.25□□□□□ -0.77
CRNDE-201ENST00000501177 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
CRNDE-201ENST00000501177 RIMS1Q86UR5 1692 aaKnown RBP10.25□□□□□ -0.77
CRNDE-201ENST00000501177 ERVH48-1M5A8F1 160 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms