RNA–Protein interactions for RNA: ENST00000498820.5

RET-204, Transcript of ret proto-oncogene, humanhuman

TSL 3

Gene RET, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-204ENST00000498820 KDRP35968 1356 aa32.23■■■□□ 2.75
RET-204ENST00000498820 TNS2Q63HR2 1409 aa32.23■■■□□ 2.75
RET-204ENST00000498820 U2AF1L5P0DN76 240 aaPredicted RBP32.21■■■□□ 2.75
RET-204ENST00000498820 U2AF1Q01081 240 aaKnown RBP eCLIP32.21■■■□□ 2.75
RET-204ENST00000498820 FAM182BQ5T319 152 aa32.21■■■□□ 2.75
RET-204ENST00000498820 CCDC184Q52MB2 194 aa32.2■■■□□ 2.75
RET-204ENST00000498820 ZCRB1Q8TBF4 217 aaKnown RBP32.2■■■□□ 2.75
RET-204ENST00000498820 MARCH10Q8NA82 808 aaPredicted RBP32.17■■■□□ 2.74
RET-204ENST00000498820 DDX54Q8TDD1 881 aaKnown RBP32.16■■■□□ 2.74
RET-204ENST00000498820 RSPH6AQ9H0K4 717 aa32.13■■■□□ 2.73
RET-204ENST00000498820 SPG7Q9UQ90 795 aa32.13■■■□□ 2.73
RET-204ENST00000498820 PKD1L3Q7Z443 1732 aa32.12■■■□□ 2.73
RET-204ENST00000498820 SHANK3Q9BYB0 1731 aa32.12■■■□□ 2.73
RET-204ENST00000498820 PLEKHO1Q53GL0 409 aaPredicted RBP32.11■■■□□ 2.73
RET-204ENST00000498820 MRS2Q9HD23 443 aa32.11■■■□□ 2.73
RET-204ENST00000498820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.11■■■□□ 2.73
RET-204ENST00000498820 PRKAR2BP31323 418 aa32.1■■■□□ 2.73
RET-204ENST00000498820 PLEKHG2Q9H7P9 1386 aa32.09■■■□□ 2.73
RET-204ENST00000498820 PCDH11XQ9BZA7 1347 aa32.09■■■□□ 2.73
RET-204ENST00000498820 PCDH11YQ9BZA8 1340 aa32.09■■■□□ 2.73
RET-204ENST00000498820 FCHSD2O94868 740 aa32.09■■■□□ 2.73
RET-204ENST00000498820 WDR43Q15061 677 aaKnown RBP eCLIP32.09■■■□□ 2.73
RET-204ENST00000498820 CYP27B1O15528 508 aa32.08■■■□□ 2.73
RET-204ENST00000498820 AMOTQ4VCS5 1084 aa32.08■■■□□ 2.73
RET-204ENST00000498820 FAM196AQ6ZSG2 479 aa32.06■■■□□ 2.72
RET-204ENST00000498820 ZNF530Q6P9A1 599 aaPredicted RBP32.05■■■□□ 2.72
RET-204ENST00000498820 PHACTR3Q96KR7 559 aa32.04■■■□□ 2.72
RET-204ENST00000498820 ADAMTS8Q9UP79 889 aa32.03■■■□□ 2.72
RET-204ENST00000498820 PHKG2P15735 406 aa32.02■■■□□ 2.72
RET-204ENST00000498820 MTHFSDQ2M296 383 aaKnown RBP32.02■■■□□ 2.72
RET-204ENST00000498820 MIER1Q8N108 512 aa32.02■■■□□ 2.72
RET-204ENST00000498820 IFNL2Q8IZJ0 200 aa32.01■■■□□ 2.71
RET-204ENST00000498820 EP400Q96L91 3159 aa32■■■□□ 2.71
RET-204ENST00000498820 PLEKHF1Q96S99 279 aa32■■■□□ 2.71
RET-204ENST00000498820 PNISRQ8TF01 805 aaKnown RBP31.99■■■□□ 2.71
RET-204ENST00000498820 BCL9O00512 1426 aa31.99■■■□□ 2.71
RET-204ENST00000498820 C1orf141Q5JVX7 400 aa31.98■■■□□ 2.71
RET-204ENST00000498820 ACSBG1Q96GR2 724 aa31.98■■■□□ 2.71
RET-204ENST00000498820 PNNQ9H307 717 aaKnown RBP31.98■■■□□ 2.71
RET-204ENST00000498820 TRIM37O94972 964 aa31.96■■■□□ 2.71
RET-204ENST00000498820 CCDC146Q8IYE0 955 aa31.96■■■□□ 2.71
RET-204ENST00000498820 NEFMP07197 916 aa31.95■■■□□ 2.71
RET-204ENST00000498820 NKX1-1Q15270 411 aaPredicted RBP31.95■■■□□ 2.71
RET-204ENST00000498820 GAS2L2Q8NHY3 880 aa31.95■■■□□ 2.71
RET-204ENST00000498820 CCER2I3L3R5 266 aa31.93■■■□□ 2.7
RET-204ENST00000498820 AKAP4Q5JQC9 854 aa31.93■■■□□ 2.7
RET-204ENST00000498820 UPF1Q92900 1129 aaKnown RBP eCLIP31.93■■■□□ 2.7
RET-204ENST00000498820 MAPK8IP3Q9UPT6 1336 aa31.93■■■□□ 2.7
RET-204ENST00000498820 KCNQ2O43526 872 aa31.92■■■□□ 2.7
RET-204ENST00000498820 PTF1AQ7RTS3 328 aa31.92■■■□□ 2.7
RET-204ENST00000498820 DOT1LQ8TEK3 1739 aa31.91■■■□□ 2.7
RET-204ENST00000498820 SBF2Q86WG5 1849 aa31.91■■■□□ 2.7
RET-204ENST00000498820 HSP90AB1P08238 724 aaKnown RBP31.9■■■□□ 2.7
RET-204ENST00000498820 MPRIPQ6WCQ1 1025 aa31.9■■■□□ 2.7
RET-204ENST00000498820 RUNDC1Q96C34 613 aa31.9■■■□□ 2.7
RET-204ENST00000498820 PRIM1P49642 420 aaKnown RBP31.89■■■□□ 2.7
RET-204ENST00000498820 SYTL4Q96C24 671 aaPredicted RBP31.89■■■□□ 2.7
RET-204ENST00000498820 DCAF5Q96JK2 942 aa31.89■■■□□ 2.7
RET-204ENST00000498820 FAM9BQ8IZU0 186 aa31.88■■■□□ 2.69
RET-204ENST00000498820 KDM6AO15550 1401 aaPredicted RBP31.88■■■□□ 2.69
RET-204ENST00000498820 TOGARAM1Q9Y4F4 1720 aa31.88■■■□□ 2.69
RET-204ENST00000498820 NHSQ6T4R5 1651 aa31.87■■■□□ 2.69
RET-204ENST00000498820 MAP3K5Q99683 1374 aa31.87■■■□□ 2.69
RET-204ENST00000498820 BCL11BQ9C0K0 894 aaPredicted RBP31.87■■■□□ 2.69
RET-204ENST00000498820 GNAT3A8MTJ3 354 aa31.86■■■□□ 2.69
RET-204ENST00000498820 NFE2L2Q16236 605 aa31.86■■■□□ 2.69
RET-204ENST00000498820 SOCS7O14512 581 aa31.85■■■□□ 2.69
RET-204ENST00000498820 LGR6Q9HBX8 967 aa31.85■■■□□ 2.69
RET-204ENST00000498820 SF3B2Q13435 895 aaKnown RBP31.84■■■□□ 2.69
RET-204ENST00000498820 CCDC125Q86Z20 511 aa31.84■■■□□ 2.69
RET-204ENST00000498820 TNS1Q9HBL0 1735 aaKnown RBP31.83■■■□□ 2.69
RET-204ENST00000498820 RNMTO43148 476 aaKnown RBP31.82■■■□□ 2.68
RET-204ENST00000498820 APBA3O96018 575 aa31.81■■■□□ 2.68
RET-204ENST00000498820 RRP7AQ9Y3A4 280 aaKnown RBP31.81■■■□□ 2.68
RET-204ENST00000498820 ERVV-2B6SEH9 535 aa31.8■■■□□ 2.68
RET-204ENST00000498820 TMPOP42166 694 aaKnown RBP31.8■■■□□ 2.68
RET-204ENST00000498820 KAT6BQ8WYB5 2073 aa31.79■■■□□ 2.68
RET-204ENST00000498820 IL17REQ8NFR9 667 aa31.79■■■□□ 2.68
RET-204ENST00000498820 CABP4P57796 275 aa31.78■■■□□ 2.68
RET-204ENST00000498820 PIGBQ92521 554 aa31.78■■■□□ 2.68
RET-204ENST00000498820 RTF1Q92541 710 aaKnown RBP31.78■■■□□ 2.68
RET-204ENST00000498820 TMOD3Q9NYL9 352 aa31.78■■■□□ 2.68
RET-204ENST00000498820 SCN11AQ9UI33 1791 aa31.78■■■□□ 2.68
RET-204ENST00000498820 ITGB4P16144 1822 aa31.77■■■□□ 2.68
RET-204ENST00000498820 APAF1O14727 1248 aa31.77■■■□□ 2.68
RET-204ENST00000498820 RIPK4P57078 832 aa31.77■■■□□ 2.68
RET-204ENST00000498820 DCTN1Q14203 1278 aa31.77■■■□□ 2.68
RET-204ENST00000498820 NEUROD2Q15784 382 aa31.77■■■□□ 2.68
RET-204ENST00000498820 MCM10Q7L590 875 aa31.77■■■□□ 2.68
RET-204ENST00000498820 ADAMTS7Q9UKP4 1686 aa31.76■■■□□ 2.68
RET-204ENST00000498820 DEFB132Q7Z7B7 95 aa31.76■■■□□ 2.67
RET-204ENST00000498820 BTAF1O14981 1849 aa31.76■■■□□ 2.67
RET-204ENST00000498820 DLG5Q8TDM6 1919 aa31.75■■■□□ 2.67
RET-204ENST00000498820 SENP3-EIF4A1A0A087X0R7 540 aa31.75■■■□□ 2.67
RET-204ENST00000498820 NFATC2IPQ8NCF5 419 aa31.75■■■□□ 2.67
RET-204ENST00000498820 HTATSF1O43719 755 aaKnown RBP31.74■■■□□ 2.67
RET-204ENST00000498820 BAG6P46379 1132 aa31.74■■■□□ 2.67
RET-204ENST00000498820 EN1Q05925 392 aaPredicted RBP31.73■■■□□ 2.67
RET-204ENST00000498820 SLC52A2Q9HAB3 445 aa31.73■■■□□ 2.67
RET-204ENST00000498820 VIRMAQ69YN4 1812 aaKnown RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms