RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SYCP2Q9BX26 1530 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 IGSF3O75054 1194 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 COL9A1P20849 921 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 SRPK2P78362 688 aaKnown RBP5.26□□□□□ -1.57
CLTC-209ENST00000498711 CHIC2Q9UKJ5 165 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 PLA2R1Q13018 1463 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 RSPH4AQ5TD94 716 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 HMX1Q9NP08 348 aaPredicted RBP5.26□□□□□ -1.57
CLTC-209ENST00000498711 LMTK3Q96Q04 1460 aa5.26□□□□□ -1.57
CLTC-209ENST00000498711 GPRASP1Q5JY77 1395 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 HOXA2O43364 376 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 GPR37L1O60883 481 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 VAC14Q08AM6 782 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 MRS2Q9HD23 443 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 USP47Q96K76 1375 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 MYO3AQ8NEV4 1616 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 PPP1R3GB7ZBB8 358 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 HELBQ8NG08 1087 aaPredicted RBP5.25□□□□□ -1.57
CLTC-209ENST00000498711 TATDN2Q93075 761 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 OTUD5Q96G74 571 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 PNMA3Q9UL41 463 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 ZNF644Q9H582 1327 aaPredicted RBP5.25□□□□□ -1.57
CLTC-209ENST00000498711 TRPM1Q7Z4N2 1603 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 ANKRD30AQ9BXX3 1397 aa5.25□□□□□ -1.57
CLTC-209ENST00000498711 PPP4R3BQ5MIZ7 849 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 TRIM34Q9BYJ4 488 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 UNC13BO14795 1591 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 KIF15Q9NS87 1388 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 PRDM15P57071 1507 aaPredicted RBP5.24□□□□□ -1.57
CLTC-209ENST00000498711 LMTK2Q8IWU2 1503 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 SETD1BQ9UPS6 1966 aaKnown RBP5.24□□□□□ -1.57
CLTC-209ENST00000498711 PALM3A6NDB9 673 aaPredicted RBP5.24□□□□□ -1.57
CLTC-209ENST00000498711 FDX1P10109 184 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 CTDSPL2Q05D32 466 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 PACS2Q86VP3 889 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 BCL2L12Q9HB09 334 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 PARD3Q8TEW0 1356 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 PTPRTO14522 1441 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 C3orf80F5H4A9 247 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 RALBP1Q15311 655 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 DOK7Q18PE1 504 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 ARSIQ5FYB1 569 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 KHSRPQ92945 711 aaKnown RBP eCLIP5.24□□□□□ -1.573e-6■■□□□ 12.2
CLTC-209ENST00000498711 ALG2Q9H553 416 aa5.24□□□□□ -1.57
CLTC-209ENST00000498711 WASHC2CQ9Y4E1 1318 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 ANKRD50Q9ULJ7 1429 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 A2MP01023 1474 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 TRIM6-TRIM34B2RNG4 842 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 RIMBP2O15034 1052 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 LMOD1P29536 600 aaPredicted RBP5.23□□□□□ -1.57
CLTC-209ENST00000498711 GCGRP47871 477 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 MTMR2Q13614 643 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 ZSWIM6Q9HCJ5 1215 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 PSDA5PKW4 1024 aaPredicted RBP5.23□□□□□ -1.57
CLTC-209ENST00000498711 PTPREP23469 700 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 SOX11P35716 441 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 PDE3BQ13370 1112 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 CCDC27Q2M243 656 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 IVNS1ABPQ9Y6Y0 642 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 BLMP54132 1417 aaPredicted RBP5.23□□□□□ -1.57
CLTC-209ENST00000498711 YEATS2Q9ULM3 1422 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 DUOX2Q9NRD8 1548 aa5.23□□□□□ -1.57
CLTC-209ENST00000498711 VWDEQ8N2E2 1590 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 ERBINQ96RT1 1412 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 E9PSI1 815 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 IRX6P78412 446 aaPredicted RBP5.22□□□□□ -1.57
CLTC-209ENST00000498711 SND1Q7KZF4 910 aaKnown RBP eCLIP5.22□□□□□ -1.57
CLTC-209ENST00000498711 PCDHGC3Q9UN70 934 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 MYBBP1AQ9BQG0 1328 aaKnown RBP5.22□□□□□ -1.57
CLTC-209ENST00000498711 B4GALNT3Q6L9W6 998 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 FAM9BQ8IZU0 186 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 TSC1Q92574 1164 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 UCN2Q96RP3 112 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 AMOTL2Q9Y2J4 779 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 SYNMO15061 1565 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 SPATA31D1Q6ZQQ2 1576 aa5.22□□□□□ -1.57
CLTC-209ENST00000498711 PRAG1Q86YV5 1406 aa5.21□□□□□ -1.57
CLTC-209ENST00000498711 CARNS1A5YM72 827 aa5.21□□□□□ -1.57
CLTC-209ENST00000498711 PER1O15534 1290 aaPredicted RBP5.21□□□□□ -1.57
CLTC-209ENST00000498711 ATG7O95352 703 aa5.21□□□□□ -1.57
CLTC-209ENST00000498711 TFIP11Q9UBB9 837 aaKnown RBP5.21□□□□□ -1.57
CLTC-209ENST00000498711 TRAPPC8Q9Y2L5 1435 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 CLTCQ00610 1675 aaKnown RBP5.21□□□□□ -1.58
CLTC-209ENST00000498711 LRRN4Q8WUT4 740 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 LHX6Q9UPM6 363 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 NOP58Q9Y2X3 529 aaKnown RBP5.21□□□□□ -1.58
CLTC-209ENST00000498711 IQGAP3Q86VI3 1631 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 MROH1Q8NDA8 1641 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 NLRP1Q9C000 1473 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 ARHGAP31Q2M1Z3 1444 aa5.21□□□□□ -1.58
CLTC-209ENST00000498711 TMEM88BA6NKF7 163 aa5.2□□□□□ -1.58
CLTC-209ENST00000498711 GUCA2AQ02747 115 aa5.2□□□□□ -1.58
CLTC-209ENST00000498711 GPR153Q6NV75 609 aa5.2□□□□□ -1.58
CLTC-209ENST00000498711 IPO9Q96P70 1041 aaKnown RBP5.2□□□□□ -1.58
CLTC-209ENST00000498711 CAMSAP1Q5T5Y3 1602 aa5.2□□□□□ -1.58
CLTC-209ENST00000498711 NEURL4Q96JN8 1562 aa5.2□□□□□ -1.58
CLTC-209ENST00000498711 CEP170BQ9Y4F5 1589 aaPredicted RBP5.2□□□□□ -1.58
CLTC-209ENST00000498711 SNPHO15079 494 aa5.2□□□□□ -1.58
CLTC-209ENST00000498711 PRR7Q8TB68 274 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms