RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PPP2R2DQ66LE6 453 aa7.96□□□□□ -1.14
VPS26A-208ENST00000497022 KDF1Q8NAX2 398 aaPredicted RBP7.96□□□□□ -1.14
VPS26A-208ENST00000497022 SPOCK3Q9BQ16 436 aa7.96□□□□□ -1.14
VPS26A-208ENST00000497022 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
VPS26A-208ENST00000497022 POLR3EQ9NVU0 708 aa7.96□□□□□ -1.14
VPS26A-208ENST00000497022 ESPNB1AK53 854 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 ERVH48-1M5A8F1 160 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 ADD1P35611 737 aaKnown RBP7.95□□□□□ -1.14
VPS26A-208ENST00000497022 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 XP32Q5T750 250 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 SEPT12Q8IYM1 358 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 IGF1RP08069 1367 aa7.95□□□□□ -1.14
VPS26A-208ENST00000497022 BCRP11274 1271 aa7.94□□□□□ -1.14
VPS26A-208ENST00000497022 GPC1P35052 558 aa7.93□□□□□ -1.14
VPS26A-208ENST00000497022 DZIP3Q86Y13 1208 aaKnown RBP7.93□□□□□ -1.14
VPS26A-208ENST00000497022 DDRGK1Q96HY6 314 aa7.93□□□□□ -1.14
VPS26A-208ENST00000497022 CNTNAP5Q8WYK1 1306 aa7.93□□□□□ -1.14
VPS26A-208ENST00000497022 H7C1W4 665 aa7.92□□□□□ -1.14
VPS26A-208ENST00000497022 PROCP04070 461 aa7.92□□□□□ -1.14
VPS26A-208ENST00000497022 ITGB2P05107 769 aa7.92□□□□□ -1.14
VPS26A-208ENST00000497022 RAB15P59190 212 aa7.92□□□□□ -1.14
VPS26A-208ENST00000497022 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
VPS26A-208ENST00000497022 NEDD1Q8NHV4 660 aa7.92□□□□□ -1.14
VPS26A-208ENST00000497022 GALNT6Q8NCL4 622 aa7.91□□□□□ -1.14
VPS26A-208ENST00000497022 DYRK1BQ9Y463 629 aa7.91□□□□□ -1.14
VPS26A-208ENST00000497022 RHOQP17081 205 aa7.9□□□□□ -1.14
VPS26A-208ENST00000497022 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
VPS26A-208ENST00000497022 TRERF1Q96PN7 1200 aa7.9□□□□□ -1.14
VPS26A-208ENST00000497022 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.9□□□□□ -1.14
VPS26A-208ENST00000497022 NSFL1CQ9UNZ2 370 aaKnown RBP7.9□□□□□ -1.14
VPS26A-208ENST00000497022 GPR25O00155 361 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 NEUROD2Q15784 382 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 DBN1Q16643 649 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 SH3D19Q5HYK7 790 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 ACDQ96AP0 544 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
VPS26A-208ENST00000497022 ATP5J2-PTCD1G3V325 749 aa7.88□□□□□ -1.15
VPS26A-208ENST00000497022 RIPOR1Q6ZS17 1223 aa7.88□□□□□ -1.15
VPS26A-208ENST00000497022 ALYREFQ86V81 257 aaKnown RBP7.88□□□□□ -1.15
VPS26A-208ENST00000497022 MX2P20592 715 aa7.87□□□□□ -1.15
VPS26A-208ENST00000497022 GTPBP3Q969Y2 492 aaKnown RBP7.87□□□□□ -1.15
VPS26A-208ENST00000497022 K7ELQ4 463 aaPredicted RBP7.86□□□□□ -1.15
VPS26A-208ENST00000497022 AP1G2O75843 785 aa7.86□□□□□ -1.15
VPS26A-208ENST00000497022 BRPF1P55201 1214 aaPredicted RBP7.86□□□□□ -1.15
VPS26A-208ENST00000497022 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
VPS26A-208ENST00000497022 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
VPS26A-208ENST00000497022 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
VPS26A-208ENST00000497022 OIP5O43482 229 aa7.85□□□□□ -1.15
VPS26A-208ENST00000497022 EPS8L1Q8TE68 723 aa7.85□□□□□ -1.15
VPS26A-208ENST00000497022 MEN1O00255 615 aa7.84□□□□□ -1.15
VPS26A-208ENST00000497022 MAP2K3P46734 347 aa7.84□□□□□ -1.15
VPS26A-208ENST00000497022 A0A1W2PRU2 124 aa7.83□□□□□ -1.16
VPS26A-208ENST00000497022 SPATA31C2B4DYI2 1134 aa7.83□□□□□ -1.16
VPS26A-208ENST00000497022 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
VPS26A-208ENST00000497022 SLC27A3Q5K4L6 730 aa7.83□□□□□ -1.16
VPS26A-208ENST00000497022 IL27Q8NEV9 243 aa7.83□□□□□ -1.16
VPS26A-208ENST00000497022 GAS2L1Q99501 681 aaPredicted RBP7.83□□□□□ -1.16
VPS26A-208ENST00000497022 HMX1Q9NP08 348 aaPredicted RBP7.83□□□□□ -1.16
VPS26A-208ENST00000497022 ATP1B4Q9UN42 357 aaPredicted RBP7.83□□□□□ -1.16
VPS26A-208ENST00000497022 ERVK-9P63128 1117 aa7.82□□□□□ -1.16
VPS26A-208ENST00000497022 POU4F2Q12837 409 aa7.82□□□□□ -1.16
VPS26A-208ENST00000497022 NBPF10Q6P3W6 841 aaKnown RBP7.82□□□□□ -1.16
VPS26A-208ENST00000497022 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
VPS26A-208ENST00000497022 NLRP3Q96P20 1036 aa7.82□□□□□ -1.16
VPS26A-208ENST00000497022 OXCT2Q9BYC2 517 aaPredicted RBP7.82□□□□□ -1.16
VPS26A-208ENST00000497022 NUCKS1Q9H1E3 243 aaKnown RBP7.82□□□□□ -1.16
VPS26A-208ENST00000497022 MKL2Q9ULH7 1088 aa7.82□□□□□ -1.16
VPS26A-208ENST00000497022 BAG6P46379 1132 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 CLN3Q13286 438 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 CYP2U1Q7Z449 544 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 CFHR5Q9BXR6 569 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 GRIP2Q9C0E4 1043 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
VPS26A-208ENST00000497022 F11P03951 625 aa7.8□□□□□ -1.16
VPS26A-208ENST00000497022 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-208ENST00000497022 RNF20Q5VTR2 975 aa7.8□□□□□ -1.16
VPS26A-208ENST00000497022 GDF2Q9UK05 429 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-208ENST00000497022 KRBA1A5PL33 1030 aa7.79□□□□□ -1.16
VPS26A-208ENST00000497022 GIGYF1O75420 1035 aaPredicted RBP7.79□□□□□ -1.16
VPS26A-208ENST00000497022 TAS1R3Q7RTX0 852 aa7.79□□□□□ -1.16
VPS26A-208ENST00000497022 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
VPS26A-208ENST00000497022 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
VPS26A-208ENST00000497022 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
VPS26A-208ENST00000497022 SNRPNP63162 240 aaKnown RBP7.78□□□□□ -1.16
VPS26A-208ENST00000497022 PHF24Q9UPV7 400 aa7.78□□□□□ -1.16
VPS26A-208ENST00000497022 Q8N3U1 123 aa7.77□□□□□ -1.17
VPS26A-208ENST00000497022 ZNF592Q92610 1267 aa7.77□□□□□ -1.17
VPS26A-208ENST00000497022 PCMTD1Q96MG8 357 aaPredicted RBP7.77□□□□□ -1.17
VPS26A-208ENST00000497022 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
VPS26A-208ENST00000497022 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.17
VPS26A-208ENST00000497022 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
VPS26A-208ENST00000497022 PIK3R2O00459 728 aa7.76□□□□□ -1.17
VPS26A-208ENST00000497022 MCCD1P59942 119 aaPredicted RBP7.76□□□□□ -1.17
VPS26A-208ENST00000497022 LBRQ14739 615 aaKnown RBP7.76□□□□□ -1.17
VPS26A-208ENST00000497022 TRIM34Q9BYJ4 488 aa7.76□□□□□ -1.17
VPS26A-208ENST00000497022 COL8A1P27658 744 aa7.75□□□□□ -1.17
VPS26A-208ENST00000497022 RFC5P40937 340 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms