RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PTGS1P23219 599 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 NBPF20Q3BBV1 942 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 TRDNQ13061 729 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 BIRC2Q13490 618 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 PKD2Q13563 968 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 BMP2KLQ5H9B9 411 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 CLEC17AQ6ZS10 378 aa9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 PRG4Q92954 1404 aaPredicted RBP9.67□□□□□ -0.86
CRNKL1-205ENST00000496549 SMC2O95347 1197 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 ARHGAP29Q52LW3 1261 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 CHD1LQ86WJ1 897 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 ARFGAP3Q9NP61 516 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 CPSF2Q9P2I0 782 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 KCNG1Q9UIX4 513 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 ERCC6L2Q5T890 1561 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 FIBPO43427 364 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 NEK4P51957 841 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 GRIPAP1Q4V328 841 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 AP1ARQ63HQ0 302 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 CARD10Q9BWT7 1032 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 CLIP2Q9UDT6 1046 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 MKRN1Q9UHC7 482 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 ZNF215Q9UL58 517 aaPredicted RBP9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 PES1O00541 588 aaKnown RBP9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 NEBLO76041 1014 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 MX1P20591 662 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 SKIDA1Q1XH10 827 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 MMS22LQ6ZRQ5 1243 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 EP400NLQ6ZTU2 488 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 GPT2Q8TD30 523 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 TERF2IPQ9NYB0 399 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
CRNKL1-205ENST00000496549 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 ANKRD36BQ8N2N9 1353 aa9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 CASTP20810 708 aaKnown RBP9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 ADAMTS12P58397 1594 aa9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 PARD3Q8TEW0 1356 aa9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 RAI14Q9P0K7 980 aa9.65□□□□□ -0.86
CRNKL1-205ENST00000496549 OAS2P29728 719 aaKnown RBP9.65□□□□□ -0.87
CRNKL1-205ENST00000496549 SNW1Q13573 536 aaKnown RBP9.65□□□□□ -0.87
CRNKL1-205ENST00000496549 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.87
CRNKL1-205ENST00000496549 GCC1Q96CN9 775 aa9.65□□□□□ -0.87
CRNKL1-205ENST00000496549 SLC52A1Q9NWF4 448 aa9.65□□□□□ -0.87
CRNKL1-205ENST00000496549 PYCARDQ9ULZ3 195 aa9.65□□□□□ -0.87
CRNKL1-205ENST00000496549 A0A1B0GUA9 196 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 SRLQ86TD4 932 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 FBXO18Q8NFZ0 1043 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 TRMT1Q9NXH9 659 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 CHMP3Q9Y3E7 222 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 RAD50Q92878 1312 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 TRIM66O15016 1216 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 TUBB4AP04350 444 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 PPP2R1AP30153 589 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 RGL3Q3MIN7 710 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 CEP170Q5SW79 1584 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 KIF3CO14782 793 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 MAP3K11Q16584 847 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 EGFL6Q8IUX8 553 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 MED4Q9NPJ6 270 aa9.64□□□□□ -0.87
CRNKL1-205ENST00000496549 PPP1R12AO14974 1030 aaPredicted RBP9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 FBXO38Q6PIJ6 1188 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 SRRTQ9BXP5 876 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 ACTN2P35609 894 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 NUP62CLQ9H1M0 184 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 RPRD2Q5VT52 1461 aaKnown RBP9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 NPM1P06748 294 aaKnown RBP eCLIP9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 BLMP54132 1417 aaPredicted RBP9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 GYS2P54840 703 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 UBE2HP62256 183 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 TBC1D9Q6ZT07 1266 aa9.63□□□□□ -0.87
CRNKL1-205ENST00000496549 SHTN1A0MZ66 631 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 RARSP54136 660 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 DNAJC21Q5F1R6 531 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 KIAA1328Q86T90 577 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 EFCAB13Q8IY85 973 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 TNMDQ9H2S6 317 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 NOP2P46087 812 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 EIF5P55010 431 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 HDAC1Q13547 482 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 MLECQ14165 292 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 JAKMIP3Q5VZ66 844 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 GDPD2Q9HCC8 539 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 ATP8B1O43520 1251 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 URI1O94763 535 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 ERLIN2O94905 339 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 ZNF777Q9ULD5 760 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 RRP7AQ9Y3A4 280 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-205ENST00000496549 SKILP12757 684 aa9.61□□□□□ -0.87
CRNKL1-205ENST00000496549 SMC1AQ14683 1233 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms