RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
PRPF3-207ENST00000496202 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
PRPF3-207ENST00000496202 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
PRPF3-207ENST00000496202 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
PRPF3-207ENST00000496202 MEGF6O75095 1541 aa12.94□□□□□ -0.34
PRPF3-207ENST00000496202 EXOC5O00471 708 aa12.94□□□□□ -0.34
PRPF3-207ENST00000496202 NCAPD2Q15021 1401 aa12.94□□□□□ -0.34
PRPF3-207ENST00000496202 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
PRPF3-207ENST00000496202 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
PRPF3-207ENST00000496202 HMOX1P09601 288 aa12.92□□□□□ -0.34
PRPF3-207ENST00000496202 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
PRPF3-207ENST00000496202 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF3-207ENST00000496202 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
PRPF3-207ENST00000496202 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
PRPF3-207ENST00000496202 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
PRPF3-207ENST00000496202 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
PRPF3-207ENST00000496202 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
PRPF3-207ENST00000496202 KDRP35968 1356 aa12.9□□□□□ -0.34
PRPF3-207ENST00000496202 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
PRPF3-207ENST00000496202 PCDH11XQ9BZA7 1347 aa12.89□□□□□ -0.35
PRPF3-207ENST00000496202 PCDH11YQ9BZA8 1340 aa12.89□□□□□ -0.35
PRPF3-207ENST00000496202 FKBP8Q14318 412 aa12.89□□□□□ -0.35
PRPF3-207ENST00000496202 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRPF3-207ENST00000496202 DDX54Q8TDD1 881 aaKnown RBP12.89□□□□□ -0.35
PRPF3-207ENST00000496202 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
PRPF3-207ENST00000496202 NEFMP07197 916 aa12.88□□□□□ -0.35
PRPF3-207ENST00000496202 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-207ENST00000496202 FAM182BQ5T319 152 aa12.88□□□□□ -0.35
PRPF3-207ENST00000496202 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
PRPF3-207ENST00000496202 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
PRPF3-207ENST00000496202 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
PRPF3-207ENST00000496202 MRS2Q9HD23 443 aa12.87□□□□□ -0.35
PRPF3-207ENST00000496202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.354e-9■■□□□ 11.7
PRPF3-207ENST00000496202 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
PRPF3-207ENST00000496202 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
PRPF3-207ENST00000496202 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
PRPF3-207ENST00000496202 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
PRPF3-207ENST00000496202 FCHSD2O94868 740 aa12.85□□□□□ -0.35
PRPF3-207ENST00000496202 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
PRPF3-207ENST00000496202 SBF2Q86WG5 1849 aa12.84□□□□□ -0.35
PRPF3-207ENST00000496202 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
PRPF3-207ENST00000496202 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
PRPF3-207ENST00000496202 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
PRPF3-207ENST00000496202 DOT1LQ8TEK3 1739 aa12.83□□□□□ -0.36
PRPF3-207ENST00000496202 CYP27B1O15528 508 aa12.83□□□□□ -0.36
PRPF3-207ENST00000496202 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
PRPF3-207ENST00000496202 EP400Q96L91 3159 aa12.83□□□□□ -0.36
PRPF3-207ENST00000496202 BCL9O00512 1426 aa12.82□□□□□ -0.36
PRPF3-207ENST00000496202 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
PRPF3-207ENST00000496202 PHKG2P15735 406 aa12.82□□□□□ -0.36
PRPF3-207ENST00000496202 NHSQ6T4R5 1651 aa12.81□□□□□ -0.36
PRPF3-207ENST00000496202 TRIM37O94972 964 aa12.81□□□□□ -0.36
PRPF3-207ENST00000496202 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
PRPF3-207ENST00000496202 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
PRPF3-207ENST00000496202 SOCS7O14512 581 aa12.8□□□□□ -0.36
PRPF3-207ENST00000496202 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
PRPF3-207ENST00000496202 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
PRPF3-207ENST00000496202 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
PRPF3-207ENST00000496202 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
PRPF3-207ENST00000496202 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
PRPF3-207ENST00000496202 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
PRPF3-207ENST00000496202 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
PRPF3-207ENST00000496202 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRPF3-207ENST00000496202 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
PRPF3-207ENST00000496202 PHACTR3Q96KR7 559 aa12.79□□□□□ -0.36
PRPF3-207ENST00000496202 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
PRPF3-207ENST00000496202 ITGB4P16144 1822 aa12.78□□□□□ -0.36
PRPF3-207ENST00000496202 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
PRPF3-207ENST00000496202 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
PRPF3-207ENST00000496202 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
PRPF3-207ENST00000496202 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
PRPF3-207ENST00000496202 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
PRPF3-207ENST00000496202 TOGARAM1Q9Y4F4 1720 aa12.78□□□□□ -0.36
PRPF3-207ENST00000496202 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
PRPF3-207ENST00000496202 BTAF1O14981 1849 aa12.78□□□□□ -0.36
PRPF3-207ENST00000496202 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 APBA3O96018 575 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 BAG6P46379 1132 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.37
PRPF3-207ENST00000496202 RUNDC1Q96C34 613 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.37
PRPF3-207ENST00000496202 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
PRPF3-207ENST00000496202 KCNQ2O43526 872 aa12.76□□□□□ -0.37
PRPF3-207ENST00000496202 CABP4P57796 275 aa12.76□□□□□ -0.37
PRPF3-207ENST00000496202 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
PRPF3-207ENST00000496202 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
PRPF3-207ENST00000496202 MIER1Q8N108 512 aa12.76□□□□□ -0.37
PRPF3-207ENST00000496202 PNISRQ8TF01 805 aaKnown RBP12.76□□□□□ -0.37
PRPF3-207ENST00000496202 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
PRPF3-207ENST00000496202 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
PRPF3-207ENST00000496202 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
PRPF3-207ENST00000496202 TEFQ10587 303 aa12.74□□□□□ -0.37
PRPF3-207ENST00000496202 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
PRPF3-207ENST00000496202 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
PRPF3-207ENST00000496202 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
PRPF3-207ENST00000496202 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
PRPF3-207ENST00000496202 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms