RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
PTPN7-218ENST00000496197 IL2RBP14784 551 aa18.01■□□□□ 0.47
PTPN7-218ENST00000496197 PRKAR2BP31323 418 aa18.01■□□□□ 0.47
PTPN7-218ENST00000496197 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
PTPN7-218ENST00000496197 PLEKHF1Q96S99 279 aa18.01■□□□□ 0.47
PTPN7-218ENST00000496197 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
PTPN7-218ENST00000496197 PHACTR3Q96KR7 559 aa18■□□□□ 0.47
PTPN7-218ENST00000496197 RGS12O14924 1447 aa17.99■□□□□ 0.47
PTPN7-218ENST00000496197 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
PTPN7-218ENST00000496197 ONECUT3O60422 494 aaPredicted RBP17.98■□□□□ 0.47
PTPN7-218ENST00000496197 FCHSD2O94868 740 aa17.98■□□□□ 0.47
PTPN7-218ENST00000496197 TNS2Q63HR2 1409 aa17.97■□□□□ 0.47
PTPN7-218ENST00000496197 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
PTPN7-218ENST00000496197 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
PTPN7-218ENST00000496197 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
PTPN7-218ENST00000496197 RXRBP28702 533 aa17.96■□□□□ 0.47
PTPN7-218ENST00000496197 SEPT12Q8IYM1 358 aa17.95■□□□□ 0.46
PTPN7-218ENST00000496197 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
PTPN7-218ENST00000496197 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
PTPN7-218ENST00000496197 A0A0G2JS52 829 aa17.93■□□□□ 0.46
PTPN7-218ENST00000496197 MYT1Q01538 1121 aa17.93■□□□□ 0.46
PTPN7-218ENST00000496197 SCN11AQ9UI33 1791 aa17.93■□□□□ 0.46
PTPN7-218ENST00000496197 ADAMTS7Q9UKP4 1686 aa17.92■□□□□ 0.46
PTPN7-218ENST00000496197 PLEKHG2Q9H7P9 1386 aa17.92■□□□□ 0.46
PTPN7-218ENST00000496197 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
PTPN7-218ENST00000496197 CYP27B1O15528 508 aa17.92■□□□□ 0.46
PTPN7-218ENST00000496197 DDB1Q16531 1140 aa17.92■□□□□ 0.46
PTPN7-218ENST00000496197 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
PTPN7-218ENST00000496197 RUNDC1Q96C34 613 aa17.92■□□□□ 0.46
PTPN7-218ENST00000496197 CDCA7Q9BWT1 371 aaPredicted RBP17.92■□□□□ 0.46
PTPN7-218ENST00000496197 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
PTPN7-218ENST00000496197 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
PTPN7-218ENST00000496197 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
PTPN7-218ENST00000496197 ITGB4P16144 1822 aa17.89■□□□□ 0.46
PTPN7-218ENST00000496197 EXOC5O00471 708 aa17.89■□□□□ 0.45
PTPN7-218ENST00000496197 PLEKHO1Q53GL0 409 aaPredicted RBP17.89■□□□□ 0.45
PTPN7-218ENST00000496197 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.45
PTPN7-218ENST00000496197 DDX54Q8TDD1 881 aaKnown RBP17.89■□□□□ 0.45
PTPN7-218ENST00000496197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTPN7-218ENST00000496197 RRP7AQ9Y3A4 280 aaKnown RBP17.89■□□□□ 0.45
PTPN7-218ENST00000496197 APAF1O14727 1248 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 SPG7Q9UQ90 795 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
PTPN7-218ENST00000496197 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
PTPN7-218ENST00000496197 PHKG2P15735 406 aa17.88■□□□□ 0.45
PTPN7-218ENST00000496197 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
PTPN7-218ENST00000496197 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
PTPN7-218ENST00000496197 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
PTPN7-218ENST00000496197 EP400Q96L91 3159 aa17.85■□□□□ 0.45
PTPN7-218ENST00000496197 MAP3K5Q99683 1374 aa17.85■□□□□ 0.45
PTPN7-218ENST00000496197 NEUROD2Q15784 382 aa17.85■□□□□ 0.45
PTPN7-218ENST00000496197 GAS2L2Q8NHY3 880 aa17.85■□□□□ 0.45
PTPN7-218ENST00000496197 PDE3BQ13370 1112 aa17.84■□□□□ 0.45
PTPN7-218ENST00000496197 AKAP4Q5JQC9 854 aa17.84■□□□□ 0.45
PTPN7-218ENST00000496197 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
PTPN7-218ENST00000496197 IFNL2Q8IZJ0 200 aa17.84■□□□□ 0.45
PTPN7-218ENST00000496197 NHSQ6T4R5 1651 aa17.84■□□□□ 0.45
PTPN7-218ENST00000496197 DCTN1Q14203 1278 aa17.83■□□□□ 0.45
PTPN7-218ENST00000496197 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.45
PTPN7-218ENST00000496197 LGR6Q9HBX8 967 aa17.83■□□□□ 0.45
PTPN7-218ENST00000496197 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.45
PTPN7-218ENST00000496197 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.44
PTPN7-218ENST00000496197 NEFMP07197 916 aa17.82■□□□□ 0.44
PTPN7-218ENST00000496197 RIPK4P57078 832 aa17.82■□□□□ 0.44
PTPN7-218ENST00000496197 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-218ENST00000496197 GNAT3A8MTJ3 354 aa17.82■□□□□ 0.44
PTPN7-218ENST00000496197 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
PTPN7-218ENST00000496197 MCM10Q7L590 875 aa17.82■□□□□ 0.44
PTPN7-218ENST00000496197 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
PTPN7-218ENST00000496197 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
PTPN7-218ENST00000496197 SALL2Q9Y467 1007 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-218ENST00000496197 MRC1P22897 1456 aa17.81■□□□□ 0.44
PTPN7-218ENST00000496197 BTAF1O14981 1849 aa17.8■□□□□ 0.44
PTPN7-218ENST00000496197 TNS1Q9HBL0 1735 aaKnown RBP17.8■□□□□ 0.44
PTPN7-218ENST00000496197 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
PTPN7-218ENST00000496197 BCL9O00512 1426 aa17.8■□□□□ 0.44
PTPN7-218ENST00000496197 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
PTPN7-218ENST00000496197 PAPPAQ13219 1627 aa17.79■□□□□ 0.44
PTPN7-218ENST00000496197 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
PTPN7-218ENST00000496197 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
PTPN7-218ENST00000496197 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
PTPN7-218ENST00000496197 KCNQ2O43526 872 aa17.77■□□□□ 0.44
PTPN7-218ENST00000496197 KDM3BQ7LBC6 1761 aa17.77■□□□□ 0.44
PTPN7-218ENST00000496197 HSP90AB1P08238 724 aaKnown RBP17.75■□□□□ 0.43
PTPN7-218ENST00000496197 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
PTPN7-218ENST00000496197 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
PTPN7-218ENST00000496197 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTPN7-218ENST00000496197 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
PTPN7-218ENST00000496197 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
PTPN7-218ENST00000496197 PRIM1P49642 420 aaKnown RBP17.74■□□□□ 0.43
PTPN7-218ENST00000496197 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
PTPN7-218ENST00000496197 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
PTPN7-218ENST00000496197 FAM196AQ6ZSG2 479 aa17.73■□□□□ 0.43
PTPN7-218ENST00000496197 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
PTPN7-218ENST00000496197 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
PTPN7-218ENST00000496197 SYTL4Q96C24 671 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms