RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 FHDC1Q9C0D6 1143 aaPredicted RBP9.55□□□□□ -0.88
SEC23B-208ENST00000494645 BCL9O00512 1426 aa9.55□□□□□ -0.88
SEC23B-208ENST00000494645 TNS2Q63HR2 1409 aa9.55□□□□□ -0.88
SEC23B-208ENST00000494645 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
SEC23B-208ENST00000494645 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
SEC23B-208ENST00000494645 DDX54Q8TDD1 881 aaKnown RBP9.54□□□□□ -0.88
SEC23B-208ENST00000494645 ERBB3P21860 1342 aa9.54□□□□□ -0.88
SEC23B-208ENST00000494645 USP31Q70CQ4 1352 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 AKAP12Q02952 1782 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 CASZ1Q86V15 1759 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 ZNF827Q17R98 1081 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 SYT17Q9BSW7 474 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 MTFR1LQ9H019 292 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 WNK3Q9BYP7 1800 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
SEC23B-208ENST00000494645 RGPD3A6NKT7 1758 aaPredicted RBP9.52□□□□□ -0.88
SEC23B-208ENST00000494645 RGPD4Q7Z3J3 1758 aa9.52□□□□□ -0.88
SEC23B-208ENST00000494645 FBLN1P23142 703 aa9.52□□□□□ -0.89
SEC23B-208ENST00000494645 KCNQ4P56696 695 aa9.52□□□□□ -0.89
SEC23B-208ENST00000494645 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
SEC23B-208ENST00000494645 TERF2IPQ9NYB0 399 aa9.52□□□□□ -0.89
SEC23B-208ENST00000494645 MYOM1P52179 1685 aa9.51□□□□□ -0.89
SEC23B-208ENST00000494645 CLCN6P51797 869 aa9.51□□□□□ -0.89
SEC23B-208ENST00000494645 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
SEC23B-208ENST00000494645 ARXQ96QS3 562 aa9.51□□□□□ -0.89
SEC23B-208ENST00000494645 LRRC4BQ9NT99 713 aa9.51□□□□□ -0.89
SEC23B-208ENST00000494645 A0A1W2PP64 1363 aa9.5□□□□□ -0.89
SEC23B-208ENST00000494645 EDC4Q6P2E9 1401 aaKnown RBP9.5□□□□□ -0.89
SEC23B-208ENST00000494645 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
SEC23B-208ENST00000494645 IP6K1Q92551 441 aa9.5□□□□□ -0.89
SEC23B-208ENST00000494645 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
SEC23B-208ENST00000494645 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
SEC23B-208ENST00000494645 MON2Q7Z3U7 1717 aa9.49□□□□□ -0.89
SEC23B-208ENST00000494645 AMPHP49418 695 aa9.49□□□□□ -0.89
SEC23B-208ENST00000494645 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
SEC23B-208ENST00000494645 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
SEC23B-208ENST00000494645 ABCC6O95255 1503 aa9.49□□□□□ -0.89
SEC23B-208ENST00000494645 TONSLQ96HA7 1378 aa9.49□□□□□ -0.89
SEC23B-208ENST00000494645 NHSQ6T4R5 1651 aa9.48□□□□□ -0.89
SEC23B-208ENST00000494645 ST20-MTHFSA0A0A6YYL1 179 aa9.48□□□□□ -0.89
SEC23B-208ENST00000494645 GPR162Q16538 588 aa9.48□□□□□ -0.89
SEC23B-208ENST00000494645 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
SEC23B-208ENST00000494645 COG3Q96JB2 828 aa9.48□□□□□ -0.89
SEC23B-208ENST00000494645 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
SEC23B-208ENST00000494645 MAP3K19Q56UN5 1328 aa9.48□□□□□ -0.89
SEC23B-208ENST00000494645 HOXC9P31274 260 aa9.47□□□□□ -0.89
SEC23B-208ENST00000494645 RRS1Q15050 365 aaKnown RBP9.47□□□□□ -0.89
SEC23B-208ENST00000494645 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
SEC23B-208ENST00000494645 LTN1O94822 1766 aa9.47□□□□□ -0.89
SEC23B-208ENST00000494645 KAT6BQ8WYB5 2073 aa9.46□□□□□ -0.89
SEC23B-208ENST00000494645 POLD1P28340 1107 aa9.46□□□□□ -0.9
SEC23B-208ENST00000494645 ZCRB1Q8TBF4 217 aaKnown RBP9.46□□□□□ -0.9
SEC23B-208ENST00000494645 TESK2Q96S53 571 aa9.46□□□□□ -0.9
SEC23B-208ENST00000494645 BTAF1O14981 1849 aa9.46□□□□□ -0.9
SEC23B-208ENST00000494645 PNPLA7Q6ZV29 1317 aa9.46□□□□□ -0.9
SEC23B-208ENST00000494645 SLC27A3Q5K4L6 730 aa9.45□□□□□ -0.9
SEC23B-208ENST00000494645 GGNBP2Q9H3C7 697 aa9.45□□□□□ -0.9
SEC23B-208ENST00000494645 PAPPAQ13219 1627 aa9.45□□□□□ -0.9
SEC23B-208ENST00000494645 NBPF6Q5VWK0 638 aa9.44□□□□□ -0.9
SEC23B-208ENST00000494645 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
SEC23B-208ENST00000494645 NLGN2Q8NFZ4 835 aa9.44□□□□□ -0.9
SEC23B-208ENST00000494645 NBPF4Q96M43 638 aa9.44□□□□□ -0.9
SEC23B-208ENST00000494645 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
SEC23B-208ENST00000494645 CCNL1Q9UK58 526 aaPredicted RBP9.44□□□□□ -0.9
SEC23B-208ENST00000494645 USP54Q70EL1 1684 aa9.44□□□□□ -0.9
SEC23B-208ENST00000494645 MEGF6O75095 1541 aa9.43□□□□□ -0.9
SEC23B-208ENST00000494645 NSD2O96028 1365 aa9.43□□□□□ -0.9
SEC23B-208ENST00000494645 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
SEC23B-208ENST00000494645 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
SEC23B-208ENST00000494645 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
SEC23B-208ENST00000494645 MAP3K5Q99683 1374 aa9.42□□□□□ -0.9
SEC23B-208ENST00000494645 FYB1O15117 783 aa9.42□□□□□ -0.9
SEC23B-208ENST00000494645 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
SEC23B-208ENST00000494645 DCBLD2Q96PD2 775 aa9.42□□□□□ -0.9
SEC23B-208ENST00000494645 UTRNP46939 3433 aa9.42□□□□□ -0.9
SEC23B-208ENST00000494645 USP47Q96K76 1375 aa9.41□□□□□ -0.9
SEC23B-208ENST00000494645 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
SEC23B-208ENST00000494645 C1QTNF8P60827 252 aa9.41□□□□□ -0.9
SEC23B-208ENST00000494645 HSP90AB2PQ58FF8 381 aa9.41□□□□□ -0.9
SEC23B-208ENST00000494645 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
SEC23B-208ENST00000494645 TMF1P82094 1093 aa9.4□□□□□ -0.9
SEC23B-208ENST00000494645 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.9
SEC23B-208ENST00000494645 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
SEC23B-208ENST00000494645 YBX3P16989 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEC23B-208ENST00000494645 SMIM5Q71RC9 77 aa9.39□□□□□ -0.91
SEC23B-208ENST00000494645 RGPD2P0DJD1 1756 aa9.39□□□□□ -0.91
SEC23B-208ENST00000494645 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
SEC23B-208ENST00000494645 SMG6Q86US8 1419 aaKnown RBP9.39□□□□□ -0.91
SEC23B-208ENST00000494645 FAM208AQ9UK61 1670 aaKnown RBP9.39□□□□□ -0.91
SEC23B-208ENST00000494645 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
SEC23B-208ENST00000494645 GALR2O43603 387 aaPredicted RBP9.38□□□□□ -0.91
SEC23B-208ENST00000494645 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
SEC23B-208ENST00000494645 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
SEC23B-208ENST00000494645 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
SEC23B-208ENST00000494645 EMILIN1Q9Y6C2 1016 aa9.38□□□□□ -0.91
SEC23B-208ENST00000494645 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
SEC23B-208ENST00000494645 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
SEC23B-208ENST00000494645 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
SEC23B-208ENST00000494645 CYP27B1O15528 508 aa9.37□□□□□ -0.91
SEC23B-208ENST00000494645 PHF14O94880 888 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms