RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 SIN3AQ96ST3 1273 aa11.46□□□□□ -0.57
DEPDC5-220ENST00000494065 SLIT3O75094 1523 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 SSH2Q76I76 1423 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 ABTB2Q8N961 1025 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 AKAP12Q02952 1782 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 PIK3C2AO00443 1686 aa11.45□□□□□ -0.58
DEPDC5-220ENST00000494065 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
DEPDC5-220ENST00000494065 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
DEPDC5-220ENST00000494065 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
DEPDC5-220ENST00000494065 NUTM2GQ5VZR2 741 aa11.43□□□□□ -0.58
DEPDC5-220ENST00000494065 LHX8Q68G74 356 aa11.43□□□□□ -0.58
DEPDC5-220ENST00000494065 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
DEPDC5-220ENST00000494065 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
DEPDC5-220ENST00000494065 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
DEPDC5-220ENST00000494065 SCUBE2Q9NQ36 999 aa11.42□□□□□ -0.58
DEPDC5-220ENST00000494065 ABCC6O95255 1503 aa11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 TNS1Q9HBL0 1735 aaKnown RBP11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 COL5A2P05997 1499 aaPredicted RBP11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 ZC3H6P61129 1189 aaKnown RBP11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 CABP1Q9NZU7 370 aa11.41□□□□□ -0.58
DEPDC5-220ENST00000494065 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 USP54Q70EL1 1684 aa11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 BAG6P46379 1132 aa11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 PARP4Q9UKK3 1724 aaKnown RBP11.4□□□□□ -0.58
DEPDC5-220ENST00000494065 GCP02774 474 aa11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 EVA1CP58658 441 aa11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 CPSF1Q10570 1443 aaKnown RBP11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
DEPDC5-220ENST00000494065 CRB1P82279 1406 aa11.38□□□□□ -0.59
DEPDC5-220ENST00000494065 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
DEPDC5-220ENST00000494065 THRAP3Q9Y2W1 955 aaKnown RBP11.38□□□□□ -0.59
DEPDC5-220ENST00000494065 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
DEPDC5-220ENST00000494065 NFAT5O94916 1531 aa11.37□□□□□ -0.59
DEPDC5-220ENST00000494065 KIF3CO14782 793 aa11.37□□□□□ -0.59
DEPDC5-220ENST00000494065 TCP11L2Q8N4U5 519 aa11.37□□□□□ -0.59
DEPDC5-220ENST00000494065 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
DEPDC5-220ENST00000494065 LRP5O75197 1615 aa11.37□□□□□ -0.59
DEPDC5-220ENST00000494065 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 LARP1Q6PKG0 1096 aaKnown RBP11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 KCNH5Q8NCM2 988 aa11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 COL18A1P39060 1754 aa11.36□□□□□ -0.59
DEPDC5-220ENST00000494065 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
DEPDC5-220ENST00000494065 PDE4AP27815 886 aa11.35□□□□□ -0.59
DEPDC5-220ENST00000494065 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
DEPDC5-220ENST00000494065 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
DEPDC5-220ENST00000494065 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
DEPDC5-220ENST00000494065 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 OVOS2A0A0G2JMS6 1433 aa11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 OVOS2A0A0J9YW53 1432 aa11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 OVOS2Q6IE36 1432 aa11.34□□□□□ -0.59
DEPDC5-220ENST00000494065 RREB1Q92766 1687 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 CD163L1Q9NR16 1453 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 USP31Q70CQ4 1352 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 MFSD10Q14728 455 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
DEPDC5-220ENST00000494065 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
DEPDC5-220ENST00000494065 PUS7Q96PZ0 661 aaKnown RBP11.32□□□□□ -0.6
DEPDC5-220ENST00000494065 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
DEPDC5-220ENST00000494065 LTN1O94822 1766 aa11.31□□□□□ -0.6
DEPDC5-220ENST00000494065 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
DEPDC5-220ENST00000494065 TOM1L2Q6ZVM7 507 aa11.31□□□□□ -0.6
DEPDC5-220ENST00000494065 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
DEPDC5-220ENST00000494065 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
DEPDC5-220ENST00000494065 TERF2IPQ9NYB0 399 aa11.31□□□□□ -0.6
DEPDC5-220ENST00000494065 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 A0A1W2PP64 1363 aa11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 FOXK1P85037 733 aa11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
DEPDC5-220ENST00000494065 RGPD5Q99666 1765 aa11.29□□□□□ -0.6
DEPDC5-220ENST00000494065 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
DEPDC5-220ENST00000494065 TRIM37O94972 964 aa11.29□□□□□ -0.6
DEPDC5-220ENST00000494065 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
DEPDC5-220ENST00000494065 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
DEPDC5-220ENST00000494065 USP47Q96K76 1375 aa11.28□□□□□ -0.6
DEPDC5-220ENST00000494065 DDB1Q16531 1140 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms