RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 AK7Q96M32 723 aa9.09□□□□□ -0.95
CLIP4-212ENST00000493551 TMPRSS4Q9NRS4 437 aa9.09□□□□□ -0.95
CLIP4-212ENST00000493551 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
CLIP4-212ENST00000493551 LRRC4BQ9NT99 713 aa9.08□□□□□ -0.96
CLIP4-212ENST00000493551 K7ELQ4 463 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-212ENST00000493551 LILRA1O75019 489 aa9.07□□□□□ -0.96
CLIP4-212ENST00000493551 GPR25O00155 361 aa9.06□□□□□ -0.96
CLIP4-212ENST00000493551 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-212ENST00000493551 ADAM32Q8TC27 787 aa9.06□□□□□ -0.96
CLIP4-212ENST00000493551 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
CLIP4-212ENST00000493551 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
CLIP4-212ENST00000493551 RNF144AP50876 292 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-212ENST00000493551 RAB15P59190 212 aa9.05□□□□□ -0.96
CLIP4-212ENST00000493551 PRICKLE2Q7Z3G6 844 aa9.05□□□□□ -0.96
CLIP4-212ENST00000493551 ACDQ96AP0 544 aa9.05□□□□□ -0.96
CLIP4-212ENST00000493551 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
CLIP4-212ENST00000493551 ERVH48-1M5A8F1 160 aa9.04□□□□□ -0.96
CLIP4-212ENST00000493551 RHOQP17081 205 aa9.04□□□□□ -0.96
CLIP4-212ENST00000493551 LRRN4Q8WUT4 740 aa9.04□□□□□ -0.96
CLIP4-212ENST00000493551 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
CLIP4-212ENST00000493551 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
CLIP4-212ENST00000493551 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
CLIP4-212ENST00000493551 H7C1W4 665 aa9.03□□□□□ -0.96
CLIP4-212ENST00000493551 NR6A1Q15406 480 aa9.03□□□□□ -0.96
CLIP4-212ENST00000493551 DBN1Q16643 649 aa9.03□□□□□ -0.96
CLIP4-212ENST00000493551 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
CLIP4-212ENST00000493551 PDE4DQ08499 809 aa9.02□□□□□ -0.97
CLIP4-212ENST00000493551 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
CLIP4-212ENST00000493551 NSFL1CQ9UNZ2 370 aaKnown RBP9.02□□□□□ -0.97
CLIP4-212ENST00000493551 GTPBP3Q969Y2 492 aaKnown RBP9.01□□□□□ -0.97
CLIP4-212ENST00000493551 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
CLIP4-212ENST00000493551 EIF4G1Q04637 1599 aaKnown RBP9□□□□□ -0.97
CLIP4-212ENST00000493551 GPC1P35052 558 aa9□□□□□ -0.97
CLIP4-212ENST00000493551 BAG6P46379 1132 aa9□□□□□ -0.97
CLIP4-212ENST00000493551 PPP2R2DQ66LE6 453 aa9□□□□□ -0.97
CLIP4-212ENST00000493551 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
CLIP4-212ENST00000493551 PNMA1Q8ND90 353 aa9□□□□□ -0.97
CLIP4-212ENST00000493551 DYRK1BQ9Y463 629 aa9□□□□□ -0.97
CLIP4-212ENST00000493551 ESPNB1AK53 854 aa8.99□□□□□ -0.97
CLIP4-212ENST00000493551 OIP5O43482 229 aa8.99□□□□□ -0.97
CLIP4-212ENST00000493551 MX2P20592 715 aa8.99□□□□□ -0.97
CLIP4-212ENST00000493551 ALYREFQ86V81 257 aaKnown RBP8.99□□□□□ -0.97
CLIP4-212ENST00000493551 Q8N3U1 123 aa8.99□□□□□ -0.97
CLIP4-212ENST00000493551 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
CLIP4-212ENST00000493551 CYLDQ9NQC7 956 aa8.98□□□□□ -0.97
CLIP4-212ENST00000493551 MYO15BQ96JP2 1530 aa8.97□□□□□ -0.97
CLIP4-212ENST00000493551 ATP5J2-PTCD1G3V325 749 aa8.97□□□□□ -0.97
CLIP4-212ENST00000493551 KRBA1A5PL33 1030 aa8.96□□□□□ -0.98
CLIP4-212ENST00000493551 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
CLIP4-212ENST00000493551 GAS2L1Q99501 681 aaPredicted RBP8.96□□□□□ -0.98
CLIP4-212ENST00000493551 MKL2Q9ULH7 1088 aa8.96□□□□□ -0.98
CLIP4-212ENST00000493551 MAP2K3P46734 347 aa8.95□□□□□ -0.98
CLIP4-212ENST00000493551 OXCT2Q9BYC2 517 aaPredicted RBP8.95□□□□□ -0.98
CLIP4-212ENST00000493551 MEN1O00255 615 aa8.94□□□□□ -0.98
CLIP4-212ENST00000493551 SNRPNP63162 240 aaKnown RBP8.94□□□□□ -0.98
CLIP4-212ENST00000493551 PSMG3-AS1Q96PY0 264 aa8.93□□□□□ -0.98
CLIP4-212ENST00000493551 FURINP09958 794 aa8.92□□□□□ -0.98
CLIP4-212ENST00000493551 POU4F2Q12837 409 aa8.92□□□□□ -0.98
CLIP4-212ENST00000493551 SLC27A3Q5K4L6 730 aa8.92□□□□□ -0.98
CLIP4-212ENST00000493551 NUCKS1Q9H1E3 243 aaKnown RBP8.92□□□□□ -0.98
CLIP4-212ENST00000493551 ZCCHC6Q5VYS8 1495 aaKnown RBP8.91□□□□□ -0.98
CLIP4-212ENST00000493551 A0A1W2PRU2 124 aa8.91□□□□□ -0.98
CLIP4-212ENST00000493551 WDR44Q5JSH3 913 aa8.91□□□□□ -0.98
CLIP4-212ENST00000493551 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
CLIP4-212ENST00000493551 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
CLIP4-212ENST00000493551 EPS8L1Q8TE68 723 aa8.91□□□□□ -0.98
CLIP4-212ENST00000493551 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
CLIP4-212ENST00000493551 CFHR5Q9BXR6 569 aa8.9□□□□□ -0.98
CLIP4-212ENST00000493551 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
CLIP4-212ENST00000493551 SHISA8B8ZZ34 492 aa8.89□□□□□ -0.99
CLIP4-212ENST00000493551 AP1G2O75843 785 aa8.89□□□□□ -0.99
CLIP4-212ENST00000493551 F11P03951 625 aa8.89□□□□□ -0.99
CLIP4-212ENST00000493551 COL8A1P27658 744 aa8.89□□□□□ -0.99
CLIP4-212ENST00000493551 CCDC125Q86Z20 511 aa8.89□□□□□ -0.99
CLIP4-212ENST00000493551 GDF2Q9UK05 429 aaPredicted RBP8.89□□□□□ -0.99
CLIP4-212ENST00000493551 SPATA31C2B4DYI2 1134 aa8.88□□□□□ -0.99
CLIP4-212ENST00000493551 SKIV2LQ15477 1246 aaKnown RBP8.88□□□□□ -0.99
CLIP4-212ENST00000493551 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLIP4-212ENST00000493551 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
CLIP4-212ENST00000493551 RRAGCQ9HB90 399 aa8.88□□□□□ -0.99
CLIP4-212ENST00000493551 TIMMDC1Q9NPL8 285 aa8.88□□□□□ -0.99
CLIP4-212ENST00000493551 ERVK-9P63128 1117 aa8.87□□□□□ -0.99
CLIP4-212ENST00000493551 CLN3Q13286 438 aa8.87□□□□□ -0.99
CLIP4-212ENST00000493551 PHF24Q9UPV7 400 aa8.87□□□□□ -0.99
CLIP4-212ENST00000493551 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-212ENST00000493551 PIK3R2O00459 728 aa8.86□□□□□ -0.99
CLIP4-212ENST00000493551 SH3D19Q5HYK7 790 aa8.86□□□□□ -0.99
CLIP4-212ENST00000493551 CC2D2BQ6DHV5 1058 aa8.86□□□□□ -0.99
CLIP4-212ENST00000493551 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
CLIP4-212ENST00000493551 KLRG1Q96E93 195 aa8.86□□□□□ -0.99
CLIP4-212ENST00000493551 KRTAP9-2Q9BYQ4 174 aa8.86□□□□□ -0.99
CLIP4-212ENST00000493551 HMX1Q9NP08 348 aaPredicted RBP8.86□□□□□ -0.99
CLIP4-212ENST00000493551 WASLO00401 505 aaPredicted RBP8.85□□□□□ -0.99
CLIP4-212ENST00000493551 GRIN2CQ14957 1233 aa8.85□□□□□ -0.99
CLIP4-212ENST00000493551 C1orf229Q6ZS94 237 aaPredicted RBP8.85□□□□□ -0.99
CLIP4-212ENST00000493551 CYP2U1Q7Z449 544 aa8.85□□□□□ -0.99
CLIP4-212ENST00000493551 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
CLIP4-212ENST00000493551 EDARADDQ8WWZ3 215 aa8.85□□□□□ -0.99
CLIP4-212ENST00000493551 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-212ENST00000493551 ATP1B4Q9UN42 357 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms