RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 LMOD1P29536 600 aaPredicted RBP5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 RBL2Q08999 1139 aa5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 VPS72Q15906 364 aa5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 NFE2L2Q16236 605 aa5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 ODR4Q5SWX8 454 aa5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 LRRC27Q9C0I9 530 aa5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 CENPJQ9HC77 1338 aaPredicted RBP5.57□□□□□ -1.52
SUPT20H-221ENST00000493537 FAM163BP0C2L3 166 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 ATICP31939 592 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 PSMD2Q13200 908 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 HSCBQ8IWL3 235 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 VPS37AQ8NEZ2 397 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 MUC3BQ9H195 1237 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 BIN2Q9UBW5 565 aaPredicted RBP5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 PALM3A6NDB9 673 aaPredicted RBP5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 TNNT2P45379 298 aaPredicted RBP5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 MTMR14Q8NCE2 650 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 ADAMTS19Q8TE59 1207 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 RELTQ969Z4 430 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 FRMD6Q96NE9 622 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 SUPT16HQ9Y5B9 1047 aaKnown RBP5.56□□□□□ -1.52
SUPT20H-221ENST00000493537 SAMD3Q8N6K7 520 aa5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 CAPN10Q9HC96 672 aa5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 TYW1Q9NV66 732 aaKnown RBP5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 POLR3EQ9NVU0 708 aa5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 RBM28Q9NW13 759 aaKnown RBP5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 TMEM51Q9NW97 253 aa5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 ODF2LQ9ULJ1 636 aa5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 TTF2Q9UNY4 1162 aaKnown RBP5.55□□□□□ -1.52
SUPT20H-221ENST00000493537 RFC5P40937 340 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 RAPGEF1Q13905 1077 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 BRD3Q15059 726 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 RGL3Q3MIN7 710 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 PHLDB3Q6NSJ2 640 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 CCDC89Q8N998 374 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 APBA2Q99767 749 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 PAIP2Q9BPZ3 127 aaKnown RBP5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 LARP6Q9BRS8 491 aaKnown RBP5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 SEZ6LQ9BYH1 1024 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 CXorf56Q9H5V9 222 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 YY1AP1Q9H869 796 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 LZTS1Q9Y250 596 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 KIF3BO15066 747 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 TMEM259Q4ZIN3 620 aa5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 MKRN1Q9UHC7 482 aaKnown RBP5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 ZBTB12Q9Y330 459 aaPredicted RBP5.54□□□□□ -1.52
SUPT20H-221ENST00000493537 GNALP38405 381 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 GNL2Q13823 731 aaKnown RBP5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 FAM161AQ3B820 660 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 LARP1BQ659C4 914 aaKnown RBP5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 MSL1Q68DK7 614 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 CHPFQ8IZ52 775 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 NGDNQ8NEJ9 315 aaKnown RBP5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 CCDC47Q96A33 483 aaKnown RBP5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 CFAP53Q96M91 514 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 ARPC5LQ9BPX5 153 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 SMC3Q9UQE7 1217 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 CHMP3Q9Y3E7 222 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 GOLGA6L6A8MZA4 724 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 CAND2O75155 1236 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 FAM160A1Q05DH4 1040 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 PPP1R18Q6NYC8 613 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 LMNTD2Q8IXW0 634 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 TTC14Q96N46 770 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 GMLQ99445 158 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 CCSER2Q9H7U1 834 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 PRKAB1Q9Y478 270 aa5.53□□□□□ -1.52
SUPT20H-221ENST00000493537 DYTNA2CJ06 578 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 PABPN1LA6NDY0 278 aaKnown RBP5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 TGFB3P10600 412 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 CASQ1P31415 396 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 TRAPPC10P48553 1259 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 AMPD3Q01432 767 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 ALDH1L2Q3SY69 923 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 CHCHD4Q8N4Q1 142 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 OGFOD1Q8N543 542 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 SLC39A13Q96H72 371 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 FMNL2Q96PY5 1086 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
SUPT20H-221ENST00000493537 CCDC163A0A0D9SF12 145 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 PDE6BP35913 854 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 CASP2P42575 452 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 NUBP1P53384 320 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 SYCP2LQ5T4T6 812 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 C1QTNF12Q5T7M4 302 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 TEX19Q8NA77 164 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 IER2Q9BTL4 223 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 REPIN1Q9BWE0 567 aaKnown RBP5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 ALDH8A1Q9H2A2 487 aaPredicted RBP5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 ACAD8Q9UKU7 415 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 ASAP1Q9ULH1 1129 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 EID1Q9Y6B2 187 aa5.51□□□□□ -1.53
SUPT20H-221ENST00000493537 NCKAP5LQ9HCH0 1330 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms