RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 DYRK1BQ9Y463 629 aa9.58□□□□□ -0.88
SYCP1-208ENST00000493377 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
SYCP1-208ENST00000493377 YBX3P16989 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
SYCP1-208ENST00000493377 RHOQP17081 205 aa9.57□□□□□ -0.88
SYCP1-208ENST00000493377 NKAPLQ5M9Q1 402 aa9.57□□□□□ -0.88
SYCP1-208ENST00000493377 PRICKLE2Q7Z3G6 844 aa9.57□□□□□ -0.88
SYCP1-208ENST00000493377 GOLGA6L1Q8N7Z2 621 aa9.56□□□□□ -0.88
SYCP1-208ENST00000493377 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.88
SYCP1-208ENST00000493377 AMPD1P23109 780 aa9.55□□□□□ -0.88
SYCP1-208ENST00000493377 PTGIRP43119 386 aa9.55□□□□□ -0.88
SYCP1-208ENST00000493377 RNF144AP50876 292 aaPredicted RBP9.55□□□□□ -0.88
SYCP1-208ENST00000493377 KRI1Q8N9T8 703 aaKnown RBP9.55□□□□□ -0.88
SYCP1-208ENST00000493377 KLRG1Q96E93 195 aa9.55□□□□□ -0.88
SYCP1-208ENST00000493377 LRP8Q14114 963 aa9.54□□□□□ -0.88
SYCP1-208ENST00000493377 SLC10A4Q96EP9 437 aa9.54□□□□□ -0.88
SYCP1-208ENST00000493377 KDM2AQ9Y2K7 1162 aa9.54□□□□□ -0.88
SYCP1-208ENST00000493377 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
SYCP1-208ENST00000493377 PER1O15534 1290 aaPredicted RBP9.52□□□□□ -0.89
SYCP1-208ENST00000493377 DYRK3O43781 588 aa9.52□□□□□ -0.89
SYCP1-208ENST00000493377 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
SYCP1-208ENST00000493377 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
SYCP1-208ENST00000493377 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
SYCP1-208ENST00000493377 TXKP42681 527 aa9.5□□□□□ -0.89
SYCP1-208ENST00000493377 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
SYCP1-208ENST00000493377 GAS2L1Q99501 681 aaPredicted RBP9.5□□□□□ -0.89
SYCP1-208ENST00000493377 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
SYCP1-208ENST00000493377 HRCP23327 699 aa9.49□□□□□ -0.89
SYCP1-208ENST00000493377 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
SYCP1-208ENST00000493377 DGKGP49619 791 aa9.49□□□□□ -0.89
SYCP1-208ENST00000493377 MCTP1Q6DN14 999 aa9.49□□□□□ -0.89
SYCP1-208ENST00000493377 SLCO4C1Q6ZQN7 724 aa9.49□□□□□ -0.89
SYCP1-208ENST00000493377 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
SYCP1-208ENST00000493377 RSBN1LQ6PCB5 846 aaPredicted RBP9.48□□□□□ -0.89
SYCP1-208ENST00000493377 KRTAP4-2Q9BYR5 136 aa9.48□□□□□ -0.89
SYCP1-208ENST00000493377 GPC1P35052 558 aa9.47□□□□□ -0.89
SYCP1-208ENST00000493377 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
SYCP1-208ENST00000493377 PHF24Q9UPV7 400 aa9.47□□□□□ -0.89
SYCP1-208ENST00000493377 PAX4O43316 350 aa9.46□□□□□ -0.9
SYCP1-208ENST00000493377 PRSS36Q5K4E3 855 aa9.46□□□□□ -0.9
SYCP1-208ENST00000493377 GIGYF2Q6Y7W6 1299 aaKnown RBP9.45□□□□□ -0.9
SYCP1-208ENST00000493377 TPSG1Q9NRR2 321 aa9.45□□□□□ -0.9
SYCP1-208ENST00000493377 ARID1BQ8NFD5 2236 aaPredicted RBP9.45□□□□□ -0.9
SYCP1-208ENST00000493377 LILRA1O75019 489 aa9.44□□□□□ -0.9
SYCP1-208ENST00000493377 BTBD6Q96KE9 485 aa9.44□□□□□ -0.9
SYCP1-208ENST00000493377 ARHGAP9Q9BRR9 750 aa9.44□□□□□ -0.9
SYCP1-208ENST00000493377 TMPRSS4Q9NRS4 437 aa9.44□□□□□ -0.9
SYCP1-208ENST00000493377 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
SYCP1-208ENST00000493377 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
SYCP1-208ENST00000493377 SPATA31C1P0DKV0 1188 aa9.43□□□□□ -0.9
SYCP1-208ENST00000493377 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
SYCP1-208ENST00000493377 DIXDC1Q155Q3 683 aa9.43□□□□□ -0.9
SYCP1-208ENST00000493377 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
SYCP1-208ENST00000493377 F11P03951 625 aa9.4□□□□□ -0.9
SYCP1-208ENST00000493377 EPXP11678 715 aa9.4□□□□□ -0.9
SYCP1-208ENST00000493377 GGA1Q9UJY5 639 aa9.4□□□□□ -0.9
SYCP1-208ENST00000493377 NBPF20Q3BBV1 942 aa9.39□□□□□ -0.91
SYCP1-208ENST00000493377 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
SYCP1-208ENST00000493377 TSC1Q92574 1164 aa9.39□□□□□ -0.91
SYCP1-208ENST00000493377 FMNL2Q96PY5 1086 aa9.39□□□□□ -0.91
SYCP1-208ENST00000493377 POU4F2Q12837 409 aa9.38□□□□□ -0.91
SYCP1-208ENST00000493377 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
SYCP1-208ENST00000493377 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
SYCP1-208ENST00000493377 NBPF10Q6P3W6 841 aaKnown RBP9.37□□□□□ -0.91
SYCP1-208ENST00000493377 NBPF15Q8N660 670 aa9.37□□□□□ -0.91
SYCP1-208ENST00000493377 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
SYCP1-208ENST00000493377 BMP4P12644 408 aa9.36□□□□□ -0.91
SYCP1-208ENST00000493377 FZD5Q13467 585 aa9.36□□□□□ -0.91
SYCP1-208ENST00000493377 CABLES1Q8TDN4 633 aa9.36□□□□□ -0.91
SYCP1-208ENST00000493377 COL17A1Q9UMD9 1497 aaPredicted RBP9.35□□□□□ -0.91
SYCP1-208ENST00000493377 THBS1P07996 1170 aa9.34□□□□□ -0.91
SYCP1-208ENST00000493377 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
SYCP1-208ENST00000493377 TIMMDC1Q9NPL8 285 aa9.34□□□□□ -0.91
SYCP1-208ENST00000493377 SPATA31C2B4DYI2 1134 aa9.33□□□□□ -0.92
SYCP1-208ENST00000493377 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
SYCP1-208ENST00000493377 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
SYCP1-208ENST00000493377 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
SYCP1-208ENST00000493377 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
SYCP1-208ENST00000493377 MEN1O00255 615 aa9.32□□□□□ -0.92
SYCP1-208ENST00000493377 CHSY3Q70JA7 882 aa9.32□□□□□ -0.92
SYCP1-208ENST00000493377 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
SYCP1-208ENST00000493377 BEGAINQ9BUH8 593 aa9.32□□□□□ -0.92
SYCP1-208ENST00000493377 C2CD2LO14523 706 aa9.31□□□□□ -0.92
SYCP1-208ENST00000493377 ARAFP10398 606 aa9.31□□□□□ -0.92
SYCP1-208ENST00000493377 LBRQ14739 615 aaKnown RBP9.31□□□□□ -0.92
SYCP1-208ENST00000493377 TRIM11Q96F44 468 aa9.31□□□□□ -0.92
SYCP1-208ENST00000493377 H2AFB1P0C5Y9 115 aa9.3□□□□□ -0.92
SYCP1-208ENST00000493377 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
SYCP1-208ENST00000493377 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
SYCP1-208ENST00000493377 APBA3O96018 575 aa9.29□□□□□ -0.92
SYCP1-208ENST00000493377 RAB15P59190 212 aa9.29□□□□□ -0.92
SYCP1-208ENST00000493377 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
SYCP1-208ENST00000493377 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
SYCP1-208ENST00000493377 SPDYE3A6NKU9 549 aa9.28□□□□□ -0.92
SYCP1-208ENST00000493377 UBAP2LQ14157 1087 aaKnown RBP9.28□□□□□ -0.92
SYCP1-208ENST00000493377 TAS1R3Q7RTX0 852 aa9.28□□□□□ -0.92
SYCP1-208ENST00000493377 ZC3H4Q9UPT8 1303 aaKnown RBP9.28□□□□□ -0.92
SYCP1-208ENST00000493377 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
SYCP1-208ENST00000493377 LAMC2Q13753 1193 aa9.27□□□□□ -0.93
SYCP1-208ENST00000493377 FKBPLQ9UIM3 349 aa9.27□□□□□ -0.93
SYCP1-208ENST00000493377 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms