RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CDK19Q9BWU1 502 aa9.36□□□□□ -0.91
HERC4-211ENST00000492996 KDM6AO15550 1401 aaPredicted RBP9.36□□□□□ -0.91
HERC4-211ENST00000492996 BCL11BQ9C0K0 894 aaPredicted RBP9.35□□□□□ -0.91
HERC4-211ENST00000492996 ZNF646O15015 1829 aaPredicted RBP9.35□□□□□ -0.91
HERC4-211ENST00000492996 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
HERC4-211ENST00000492996 KCPQ6ZWJ8 1503 aa9.35□□□□□ -0.91
HERC4-211ENST00000492996 UBE2Q2Q8WVN8 375 aa9.34□□□□□ -0.91
HERC4-211ENST00000492996 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
HERC4-211ENST00000492996 WAPLQ7Z5K2 1190 aa9.34□□□□□ -0.91
HERC4-211ENST00000492996 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
HERC4-211ENST00000492996 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
HERC4-211ENST00000492996 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
HERC4-211ENST00000492996 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
HERC4-211ENST00000492996 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
HERC4-211ENST00000492996 KNSTRNQ9Y448 316 aa9.33□□□□□ -0.92
HERC4-211ENST00000492996 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
HERC4-211ENST00000492996 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
HERC4-211ENST00000492996 DEKP35659 375 aaKnown RBP9.32□□□□□ -0.92
HERC4-211ENST00000492996 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
HERC4-211ENST00000492996 PSME4Q14997 1843 aa9.31□□□□□ -0.92
HERC4-211ENST00000492996 ERBB3P21860 1342 aa9.31□□□□□ -0.92
HERC4-211ENST00000492996 ZNF609O15014 1411 aa9.31□□□□□ -0.92
HERC4-211ENST00000492996 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
HERC4-211ENST00000492996 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
HERC4-211ENST00000492996 MEX3CQ5U5Q3 659 aaKnown RBP9.3□□□□□ -0.92
HERC4-211ENST00000492996 TMEM132EQ6IEE7 984 aa9.3□□□□□ -0.92
HERC4-211ENST00000492996 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
HERC4-211ENST00000492996 TRAK1Q9UPV9 953 aa9.3□□□□□ -0.92
HERC4-211ENST00000492996 NCBP3Q53F19 620 aaKnown RBP9.29□□□□□ -0.92
HERC4-211ENST00000492996 IP6K1Q92551 441 aa9.29□□□□□ -0.92
HERC4-211ENST00000492996 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
HERC4-211ENST00000492996 MEGF6O75095 1541 aa9.29□□□□□ -0.92
HERC4-211ENST00000492996 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
HERC4-211ENST00000492996 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
HERC4-211ENST00000492996 LTBP1Q14766 1721 aa9.28□□□□□ -0.92
HERC4-211ENST00000492996 FER1L6Q2WGJ9 1857 aa9.28□□□□□ -0.92
HERC4-211ENST00000492996 ERICH6BQ5W0A0 696 aa9.28□□□□□ -0.92
HERC4-211ENST00000492996 PLEKHG5O94827 1062 aa9.27□□□□□ -0.92
HERC4-211ENST00000492996 FLT4P35916 1363 aa9.27□□□□□ -0.93
HERC4-211ENST00000492996 RTN4Q9NQC3 1192 aaKnown RBP9.27□□□□□ -0.93
HERC4-211ENST00000492996 ADAMTS8Q9UP79 889 aa9.27□□□□□ -0.93
HERC4-211ENST00000492996 GCP02774 474 aa9.27□□□□□ -0.93
HERC4-211ENST00000492996 PPP2R1AP30153 589 aa9.27□□□□□ -0.93
HERC4-211ENST00000492996 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
HERC4-211ENST00000492996 SBF1O95248 1867 aa9.26□□□□□ -0.93
HERC4-211ENST00000492996 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
HERC4-211ENST00000492996 BAG6P46379 1132 aa9.26□□□□□ -0.93
HERC4-211ENST00000492996 ANKRD31Q8N7Z5 1873 aa9.26□□□□□ -0.93
HERC4-211ENST00000492996 SAFB2Q14151 953 aaKnown RBP eCLIP9.26□□□□□ -0.93
HERC4-211ENST00000492996 WDR43Q15061 677 aaKnown RBP eCLIP9.26□□□□□ -0.93
HERC4-211ENST00000492996 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
HERC4-211ENST00000492996 RCAN3Q9UKA8 241 aa9.25□□□□□ -0.93
HERC4-211ENST00000492996 PKNOX2Q96KN3 472 aa9.24□□□□□ -0.93
HERC4-211ENST00000492996 CCDC146Q8IYE0 955 aa9.24□□□□□ -0.93
HERC4-211ENST00000492996 C8orf37Q96NL8 207 aa9.24□□□□□ -0.93
HERC4-211ENST00000492996 ZC3H4Q9UPT8 1303 aaKnown RBP9.23□□□□□ -0.93
HERC4-211ENST00000492996 PLIN1O60240 522 aa9.23□□□□□ -0.93
HERC4-211ENST00000492996 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
HERC4-211ENST00000492996 SLC12A5Q9H2X9 1139 aa9.23□□□□□ -0.93
HERC4-211ENST00000492996 STK26Q9P289 416 aa9.23□□□□□ -0.93
HERC4-211ENST00000492996 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
HERC4-211ENST00000492996 RRP1P56182 461 aaKnown RBP9.22□□□□□ -0.93
HERC4-211ENST00000492996 EXOC6Q8TAG9 804 aa9.22□□□□□ -0.93
HERC4-211ENST00000492996 A0A1B0GUL6 1792 aa9.22□□□□□ -0.93
HERC4-211ENST00000492996 FOXO3O43524 673 aa9.22□□□□□ -0.93
HERC4-211ENST00000492996 POGKQ9P215 609 aa9.22□□□□□ -0.93
HERC4-211ENST00000492996 CEMIPQ8WUJ3 1361 aa9.22□□□□□ -0.93
HERC4-211ENST00000492996 SCN4AP35499 1836 aa9.21□□□□□ -0.93
HERC4-211ENST00000492996 DLG5Q8TDM6 1919 aa9.21□□□□□ -0.93
HERC4-211ENST00000492996 COL11A2P13942 1736 aaPredicted RBP9.21□□□□□ -0.93
HERC4-211ENST00000492996 ARAP2Q8WZ64 1704 aa9.21□□□□□ -0.93
HERC4-211ENST00000492996 IGSF1Q8N6C5 1336 aa9.21□□□□□ -0.94
HERC4-211ENST00000492996 PTGER2P43116 358 aa9.21□□□□□ -0.94
HERC4-211ENST00000492996 PDE3BQ13370 1112 aa9.21□□□□□ -0.94
HERC4-211ENST00000492996 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
HERC4-211ENST00000492996 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
HERC4-211ENST00000492996 PODXL2Q9NZ53 605 aa9.2□□□□□ -0.94
HERC4-211ENST00000492996 MSH5O43196 834 aa9.19□□□□□ -0.94
HERC4-211ENST00000492996 FLAD1Q8NFF5 587 aa9.19□□□□□ -0.94
HERC4-211ENST00000492996 BTG4Q9NY30 223 aa9.19□□□□□ -0.94
HERC4-211ENST00000492996 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
HERC4-211ENST00000492996 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
HERC4-211ENST00000492996 CNTNAP4Q9C0A0 1308 aa9.19□□□□□ -0.94
HERC4-211ENST00000492996 APAF1O14727 1248 aa9.18□□□□□ -0.94
HERC4-211ENST00000492996 ZBTB22O15209 634 aa9.18□□□□□ -0.94
HERC4-211ENST00000492996 C14orf37Q86TY3 774 aa9.18□□□□□ -0.94
HERC4-211ENST00000492996 NBR1Q14596 966 aa9.18□□□□□ -0.94
HERC4-211ENST00000492996 MORC1Q86VD1 984 aa9.18□□□□□ -0.94
HERC4-211ENST00000492996 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
HERC4-211ENST00000492996 PAPPA2Q9BXP8 1791 aa9.17□□□□□ -0.94
HERC4-211ENST00000492996 ADRA2BP18089 450 aa9.16□□□□□ -0.94
HERC4-211ENST00000492996 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
HERC4-211ENST00000492996 RBBP6Q7Z6E9 1792 aaKnown RBP9.16□□□□□ -0.94
HERC4-211ENST00000492996 DDX17Q92841 729 aaKnown RBP9.16□□□□□ -0.94
HERC4-211ENST00000492996 CACNA1FO60840 1977 aa9.16□□□□□ -0.94
HERC4-211ENST00000492996 KCNQ2O43526 872 aa9.15□□□□□ -0.94
HERC4-211ENST00000492996 GOLGA2Q08379 1002 aa9.15□□□□□ -0.94
HERC4-211ENST00000492996 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
HERC4-211ENST00000492996 HEG1Q9ULI3 1381 aa9.15□□□□□ -0.94
HERC4-211ENST00000492996 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms