RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 ZKSCAN2Q63HK3 967 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 RTEL1-TNFRSF6BF6WH68 1400 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 KCNA4P22459 653 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 PLS1Q14651 629 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 TTC16Q8NEE8 873 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 PRPF31Q8WWY3 499 aaKnown RBP6.37□□□□□ -1.39
FN1-224ENST00000492816 RTCBQ9Y3I0 505 aaKnown RBP6.37□□□□□ -1.39
FN1-224ENST00000492816 NPHP3Q7Z494 1330 aa6.37□□□□□ -1.39
FN1-224ENST00000492816 ANKRD62A6NC57 917 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 BTBD11A6QL63 1104 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 ANKRD45Q5TZF3 282 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 CCDC73Q6ZRK6 1079 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 CDCA7Q9BWT1 371 aaPredicted RBP6.36□□□□□ -1.39
FN1-224ENST00000492816 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 CCAR2Q8N163 923 aaKnown RBP6.36□□□□□ -1.39
FN1-224ENST00000492816 FLAD1Q8NFF5 587 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 RAB34Q9BZG1 259 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 STK25O00506 426 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 DDB1Q16531 1140 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 COG6Q9Y2V7 657 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 SENP3-EIF4A1A0A087X0R7 540 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 M0QZ92 97 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 CDKL5O76039 1030 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 BAG4O95429 457 aaKnown RBP6.36□□□□□ -1.39
FN1-224ENST00000492816 MYL6BP14649 208 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 SMARCE1Q969G3 411 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 NUCB2P80303 420 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 XPCQ01831 940 aaPredicted RBP6.36□□□□□ -1.39
FN1-224ENST00000492816 PDE3AQ14432 1141 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 STXBP4Q6ZWJ1 553 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 RXRBP28702 533 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 CCDC7Q96M83 1385 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 PALM3A6NDB9 673 aaPredicted RBP6.36□□□□□ -1.39
FN1-224ENST00000492816 NAT10Q9H0A0 1025 aaKnown RBP6.36□□□□□ -1.39
FN1-224ENST00000492816 ABCF2Q9UG63 623 aa6.36□□□□□ -1.39
FN1-224ENST00000492816 H7C1D1 291 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 AXDND1Q5T1B0 1012 aaPredicted RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 METTL24Q5JXM2 366 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 ZNF354CQ86Y25 554 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 JMYQ8N9B5 988 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.35□□□□□ -1.393e-21■■■■■ 48.7
FN1-224ENST00000492816 CTNNA3Q9UI47 895 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 BICD2Q8TD16 824 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 KRT28Q7Z3Y7 464 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 WASF1Q92558 559 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 SSBP05455 408 aaKnown RBP eCLIP6.35□□□□□ -1.39
FN1-224ENST00000492816 NFE2L2Q16236 605 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 TSPYL2Q9H2G4 693 aaPredicted RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 CIZ1Q9ULV3 898 aaPredicted RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 CENPQQ7L2Z9 268 aaPredicted RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 VIMP08670 466 aaKnown RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 RBM26Q5T8P6 1007 aaKnown RBP6.35□□□□□ -1.39
FN1-224ENST00000492816 VEZTQ9HBM0 779 aa6.35□□□□□ -1.39
FN1-224ENST00000492816 NR1I2O75469 434 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 CCDC174Q6PII3 467 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 HACE1Q8IYU2 909 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 SH2D4AQ9H788 454 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 CD109Q6YHK3 1445 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 RIOK3O14730 519 aaKnown RBP6.34□□□□□ -1.39
FN1-224ENST00000492816 HAUS2Q9NVX0 235 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 SSR1P43307 286 aaKnown RBP6.34□□□□□ -1.39
FN1-224ENST00000492816 PABPC4Q13310 644 aaKnown RBP eCLIP6.34□□□□□ -1.39
FN1-224ENST00000492816 RBM28Q9NW13 759 aaKnown RBP6.34□□□□□ -1.39
FN1-224ENST00000492816 DDX19BQ9UMR2 479 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 SYNJ1O43426 1573 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 H0YIN7 160 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 STAMBPO95630 424 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 ACBD3Q9H3P7 528 aa6.34□□□□□ -1.39
FN1-224ENST00000492816 HDGFL1Q5TGJ6 251 aa6.34□□□□□ -1.4
FN1-224ENST00000492816 TANGO6Q9C0B7 1094 aa6.34□□□□□ -1.4
FN1-224ENST00000492816 HMOX1P09601 288 aa6.34□□□□□ -1.4
FN1-224ENST00000492816 NUP133Q8WUM0 1156 aa6.34□□□□□ -1.4
FN1-224ENST00000492816 ZC3H12CQ9C0D7 883 aaKnown RBP6.34□□□□□ -1.4
FN1-224ENST00000492816 RPGRIP1LQ68CZ1 1315 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 CETN1Q12798 172 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 ZNF804AQ7Z570 1209 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 CCDC12Q8WUD4 166 aaPredicted RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 PRAM1Q96QH2 718 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 APBA3O96018 575 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 TMEM266Q2M3C6 531 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 MYOM3Q5VTT5 1437 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 RBM17Q96I25 401 aaKnown RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 PODXL2Q9NZ53 605 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 SKIV2LQ15477 1246 aaKnown RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 SAMM50Q9Y512 469 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 CLUAP1Q96AJ1 413 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 TMEM106CQ9BVX2 250 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 ANKRD18BA2A2Z9 1011 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 PTCD1O75127 700 aaKnown RBP6.33□□□□□ -1.4
FN1-224ENST00000492816 KIF20AO95235 890 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 DACH1Q9UI36 760 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 SMC3Q9UQE7 1217 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 MAP3K12Q12852 859 aa6.33□□□□□ -1.4
FN1-224ENST00000492816 USP37Q86T82 979 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms