RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
NCKAP1-206ENST00000492058 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
NCKAP1-206ENST00000492058 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
NCKAP1-206ENST00000492058 HOXB3P14651 431 aaPredicted RBP13.51□□□□□ -0.25
NCKAP1-206ENST00000492058 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
NCKAP1-206ENST00000492058 PTF1AQ7RTS3 328 aa13.51□□□□□ -0.25
NCKAP1-206ENST00000492058 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
NCKAP1-206ENST00000492058 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
NCKAP1-206ENST00000492058 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
NCKAP1-206ENST00000492058 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
NCKAP1-206ENST00000492058 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
NCKAP1-206ENST00000492058 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
NCKAP1-206ENST00000492058 ACEP12821 1306 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 ERBB3P21860 1342 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 RREB1Q92766 1687 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 PLSCR1O15162 318 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 EFCAB3Q8N7B9 438 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 TULP4Q9NRJ4 1543 aa13.48□□□□□ -0.25
NCKAP1-206ENST00000492058 C11orf95C9JLR9 678 aaPredicted RBP13.47□□□□□ -0.25
NCKAP1-206ENST00000492058 DDB1Q16531 1140 aa13.47□□□□□ -0.25
NCKAP1-206ENST00000492058 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
NCKAP1-206ENST00000492058 GCP02774 474 aa13.46□□□□□ -0.25
NCKAP1-206ENST00000492058 PTGER2P43116 358 aa13.46□□□□□ -0.25
NCKAP1-206ENST00000492058 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
NCKAP1-206ENST00000492058 STK32BQ9NY57 414 aa13.46□□□□□ -0.25
NCKAP1-206ENST00000492058 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
NCKAP1-206ENST00000492058 NLRP13Q86W25 1043 aa13.44□□□□□ -0.26
NCKAP1-206ENST00000492058 NRKQ7Z2Y5 1582 aa13.44□□□□□ -0.26
NCKAP1-206ENST00000492058 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
NCKAP1-206ENST00000492058 OVOS2A0A0G2JMS6 1433 aa13.43□□□□□ -0.26
NCKAP1-206ENST00000492058 OVOS2A0A0J9YW53 1432 aa13.43□□□□□ -0.26
NCKAP1-206ENST00000492058 OVOS2Q6IE36 1432 aa13.43□□□□□ -0.26
NCKAP1-206ENST00000492058 SLC15A2Q16348 729 aa13.42□□□□□ -0.26
NCKAP1-206ENST00000492058 GPR162Q16538 588 aa13.42□□□□□ -0.26
NCKAP1-206ENST00000492058 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
NCKAP1-206ENST00000492058 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
NCKAP1-206ENST00000492058 ATP7BP35670 1465 aa13.42□□□□□ -0.26
NCKAP1-206ENST00000492058 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
NCKAP1-206ENST00000492058 UTRNP46939 3433 aa13.41□□□□□ -0.26
NCKAP1-206ENST00000492058 PHRF1Q9P1Y6 1649 aaKnown RBP13.41□□□□□ -0.26
NCKAP1-206ENST00000492058 CPDO75976 1380 aa13.41□□□□□ -0.26
NCKAP1-206ENST00000492058 CRB1P82279 1406 aa13.4□□□□□ -0.26
NCKAP1-206ENST00000492058 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
NCKAP1-206ENST00000492058 NLRP6P59044 892 aa13.4□□□□□ -0.26
NCKAP1-206ENST00000492058 ARXQ96QS3 562 aa13.4□□□□□ -0.26
NCKAP1-206ENST00000492058 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
NCKAP1-206ENST00000492058 SOX12O15370 315 aa13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 POLR3AO14802 1390 aaPredicted RBP13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 MYOM1P52179 1685 aa13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 USP19O94966 1318 aa13.39□□□□□ -0.27
NCKAP1-206ENST00000492058 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
NCKAP1-206ENST00000492058 ZSWIM6Q9HCJ5 1215 aa13.38□□□□□ -0.27
NCKAP1-206ENST00000492058 EXOC5O00471 708 aa13.37□□□□□ -0.27
NCKAP1-206ENST00000492058 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
NCKAP1-206ENST00000492058 CASZ1Q86V15 1759 aa13.36□□□□□ -0.27
NCKAP1-206ENST00000492058 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
NCKAP1-206ENST00000492058 ACSBG1Q96GR2 724 aa13.36□□□□□ -0.27
NCKAP1-206ENST00000492058 AXIN2Q9Y2T1 843 aa13.36□□□□□ -0.27
NCKAP1-206ENST00000492058 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
NCKAP1-206ENST00000492058 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
NCKAP1-206ENST00000492058 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
NCKAP1-206ENST00000492058 ITSN1Q15811 1721 aa13.34□□□□□ -0.27
NCKAP1-206ENST00000492058 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
NCKAP1-206ENST00000492058 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
NCKAP1-206ENST00000492058 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
NCKAP1-206ENST00000492058 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.28
NCKAP1-206ENST00000492058 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
NCKAP1-206ENST00000492058 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
NCKAP1-206ENST00000492058 CARD10Q9BWT7 1032 aa13.31□□□□□ -0.28
NCKAP1-206ENST00000492058 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
NCKAP1-206ENST00000492058 SBF2Q86WG5 1849 aa13.3□□□□□ -0.28
NCKAP1-206ENST00000492058 POLD1P28340 1107 aa13.3□□□□□ -0.28
NCKAP1-206ENST00000492058 STAC3Q96MF2 364 aa13.3□□□□□ -0.28
NCKAP1-206ENST00000492058 LRRC37A3O60309 1634 aa13.3□□□□□ -0.28
NCKAP1-206ENST00000492058 ZNF827Q17R98 1081 aa13.29□□□□□ -0.28
NCKAP1-206ENST00000492058 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
NCKAP1-206ENST00000492058 RNF166Q96A37 237 aaPredicted RBP13.29□□□□□ -0.28
NCKAP1-206ENST00000492058 RGPD3A6NKT7 1758 aaPredicted RBP13.29□□□□□ -0.28
NCKAP1-206ENST00000492058 RGPD4Q7Z3J3 1758 aa13.29□□□□□ -0.28
NCKAP1-206ENST00000492058 CHD4Q14839 1912 aa13.29□□□□□ -0.28
NCKAP1-206ENST00000492058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
NCKAP1-206ENST00000492058 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
NCKAP1-206ENST00000492058 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
NCKAP1-206ENST00000492058 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.28
NCKAP1-206ENST00000492058 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
NCKAP1-206ENST00000492058 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
NCKAP1-206ENST00000492058 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
NCKAP1-206ENST00000492058 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
NCKAP1-206ENST00000492058 BCL9O00512 1426 aa13.26□□□□□ -0.29
NCKAP1-206ENST00000492058 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
NCKAP1-206ENST00000492058 KCNH5Q8NCM2 988 aa13.26□□□□□ -0.29
NCKAP1-206ENST00000492058 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
NCKAP1-206ENST00000492058 RAB3GAP2Q9H2M9 1393 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms