RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 LILRA1O75019 489 aa8.19□□□□□ -1.1
VTA1-204ENST00000491881 IGHA1P01876 353 aa8.19□□□□□ -1.1
VTA1-204ENST00000491881 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
VTA1-204ENST00000491881 FOXK2Q01167 660 aa8.18□□□□□ -1.1
VTA1-204ENST00000491881 PRICKLE2Q7Z3G6 844 aa8.17□□□□□ -1.1
VTA1-204ENST00000491881 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
VTA1-204ENST00000491881 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
VTA1-204ENST00000491881 ENAMQ9NRM1 1142 aa8.17□□□□□ -1.1
VTA1-204ENST00000491881 CUEDC1Q9NWM3 386 aaPredicted RBP8.17□□□□□ -1.1
VTA1-204ENST00000491881 GTF3C3Q9Y5Q9 886 aa8.17□□□□□ -1.1
VTA1-204ENST00000491881 CELA2BP08218 269 aaPredicted RBP8.16□□□□□ -1.1
VTA1-204ENST00000491881 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
VTA1-204ENST00000491881 RHOQP17081 205 aa8.16□□□□□ -1.1
VTA1-204ENST00000491881 GAS6Q14393 721 aa8.16□□□□□ -1.1
VTA1-204ENST00000491881 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
VTA1-204ENST00000491881 CYLDQ9NQC7 956 aa8.16□□□□□ -1.1
VTA1-204ENST00000491881 ESPNB1AK53 854 aa8.15□□□□□ -1.1
VTA1-204ENST00000491881 FOXR1Q6PIV2 292 aa8.15□□□□□ -1.1
VTA1-204ENST00000491881 SEPT12Q8IYM1 358 aa8.15□□□□□ -1.1
VTA1-204ENST00000491881 RNF144AP50876 292 aaPredicted RBP8.14□□□□□ -1.11
VTA1-204ENST00000491881 MBIPQ9NS73 344 aa8.14□□□□□ -1.11
VTA1-204ENST00000491881 ATP5J2-PTCD1G3V325 749 aa8.13□□□□□ -1.11
VTA1-204ENST00000491881 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
VTA1-204ENST00000491881 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
VTA1-204ENST00000491881 ZNF837Q96EG3 531 aaPredicted RBP8.13□□□□□ -1.11
VTA1-204ENST00000491881 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
VTA1-204ENST00000491881 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
VTA1-204ENST00000491881 GPR25O00155 361 aa8.12□□□□□ -1.11
VTA1-204ENST00000491881 MEN1O00255 615 aa8.12□□□□□ -1.11
VTA1-204ENST00000491881 PCMTD1Q96MG8 357 aaPredicted RBP8.12□□□□□ -1.11
VTA1-204ENST00000491881 PHF20L1A8MW92 1017 aa8.11□□□□□ -1.11
VTA1-204ENST00000491881 IGF1RP08069 1367 aa8.1□□□□□ -1.11
VTA1-204ENST00000491881 GPC1P35052 558 aa8.1□□□□□ -1.11
VTA1-204ENST00000491881 NEDD1Q8NHV4 660 aa8.1□□□□□ -1.11
VTA1-204ENST00000491881 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
VTA1-204ENST00000491881 H7C1W4 665 aa8.09□□□□□ -1.11
VTA1-204ENST00000491881 RFC5P40937 340 aa8.09□□□□□ -1.11
VTA1-204ENST00000491881 DBN1Q16643 649 aa8.09□□□□□ -1.11
VTA1-204ENST00000491881 PODNQ7Z5L7 613 aa8.09□□□□□ -1.11
VTA1-204ENST00000491881 GAS2L1Q99501 681 aaPredicted RBP8.09□□□□□ -1.11
VTA1-204ENST00000491881 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
VTA1-204ENST00000491881 GIGYF1O75420 1035 aaPredicted RBP8.08□□□□□ -1.12
VTA1-204ENST00000491881 BCRP11274 1271 aa8.08□□□□□ -1.12
VTA1-204ENST00000491881 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
VTA1-204ENST00000491881 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
VTA1-204ENST00000491881 TRERF1Q96PN7 1200 aa8.08□□□□□ -1.12
VTA1-204ENST00000491881 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
VTA1-204ENST00000491881 A0A1W2PRU2 124 aa8.07□□□□□ -1.12
VTA1-204ENST00000491881 ZBBXA8MT70 800 aa8.07□□□□□ -1.12
VTA1-204ENST00000491881 MSTNO14793 375 aa8.07□□□□□ -1.12
VTA1-204ENST00000491881 PLA2G4EQ3MJ16 856 aa8.07□□□□□ -1.12
VTA1-204ENST00000491881 GTPBP3Q969Y2 492 aaKnown RBP8.07□□□□□ -1.12
VTA1-204ENST00000491881 DCAF5Q96JK2 942 aa8.07□□□□□ -1.12
VTA1-204ENST00000491881 NLRP3Q96P20 1036 aa8.07□□□□□ -1.12
VTA1-204ENST00000491881 POU4F2Q12837 409 aa8.06□□□□□ -1.12
VTA1-204ENST00000491881 CC2D2BQ6DHV5 1058 aa8.06□□□□□ -1.12
VTA1-204ENST00000491881 TRIM34Q9BYJ4 488 aa8.06□□□□□ -1.12
VTA1-204ENST00000491881 MX2P20592 715 aa8.05□□□□□ -1.12
VTA1-204ENST00000491881 CCDC125Q86Z20 511 aa8.05□□□□□ -1.12
VTA1-204ENST00000491881 ACDQ96AP0 544 aa8.05□□□□□ -1.12
VTA1-204ENST00000491881 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
VTA1-204ENST00000491881 ERVK-9P63128 1117 aa8.04□□□□□ -1.12
VTA1-204ENST00000491881 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
VTA1-204ENST00000491881 FBXO45P0C2W1 286 aa8.03□□□□□ -1.12
VTA1-204ENST00000491881 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
VTA1-204ENST00000491881 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
VTA1-204ENST00000491881 NBPF15Q8N660 670 aa8.03□□□□□ -1.12
VTA1-204ENST00000491881 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
VTA1-204ENST00000491881 CLN3Q13286 438 aa8.02□□□□□ -1.13
VTA1-204ENST00000491881 TMEM259Q4ZIN3 620 aa8.02□□□□□ -1.13
VTA1-204ENST00000491881 ERICH6Q7L0X2 663 aa8.02□□□□□ -1.13
VTA1-204ENST00000491881 GRIP2Q9C0E4 1043 aa8.02□□□□□ -1.13
VTA1-204ENST00000491881 NUCKS1Q9H1E3 243 aaKnown RBP8.02□□□□□ -1.13
VTA1-204ENST00000491881 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
VTA1-204ENST00000491881 TIMMDC1Q9NPL8 285 aa8.02□□□□□ -1.13
VTA1-204ENST00000491881 ADAM23O75077 832 aa8.01□□□□□ -1.13
VTA1-204ENST00000491881 GALNT6Q8NCL4 622 aa8.01□□□□□ -1.13
VTA1-204ENST00000491881 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
VTA1-204ENST00000491881 LRRC4BQ9NT99 713 aa8.01□□□□□ -1.13
VTA1-204ENST00000491881 SPATA31C2B4DYI2 1134 aa8□□□□□ -1.13
VTA1-204ENST00000491881 F11P03951 625 aa8□□□□□ -1.13
VTA1-204ENST00000491881 SCTRP47872 440 aa8□□□□□ -1.13
VTA1-204ENST00000491881 WDR44Q5JSH3 913 aa8□□□□□ -1.13
VTA1-204ENST00000491881 TAS1R3Q7RTX0 852 aa8□□□□□ -1.13
VTA1-204ENST00000491881 PCDHB11Q9Y5F2 797 aa8□□□□□ -1.13
VTA1-204ENST00000491881 WASLO00401 505 aaPredicted RBP7.99□□□□□ -1.13
VTA1-204ENST00000491881 OIP5O43482 229 aa7.99□□□□□ -1.13
VTA1-204ENST00000491881 ITGB2P05107 769 aa7.99□□□□□ -1.13
VTA1-204ENST00000491881 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
VTA1-204ENST00000491881 C14orf37Q86TY3 774 aa7.99□□□□□ -1.13
VTA1-204ENST00000491881 PROCP04070 461 aa7.98□□□□□ -1.13
VTA1-204ENST00000491881 MAP2K3P46734 347 aa7.98□□□□□ -1.13
VTA1-204ENST00000491881 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
VTA1-204ENST00000491881 GJD4Q96KN9 370 aaPredicted RBP7.98□□□□□ -1.13
VTA1-204ENST00000491881 OXCT2Q9BYC2 517 aaPredicted RBP7.98□□□□□ -1.13
VTA1-204ENST00000491881 OSBPL3Q9H4L5 887 aa7.97□□□□□ -1.13
VTA1-204ENST00000491881 RAB6BQ9NRW1 208 aa7.97□□□□□ -1.13
VTA1-204ENST00000491881 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
VTA1-204ENST00000491881 TRAK2O60296 914 aa7.96□□□□□ -1.14
VTA1-204ENST00000491881 NR1H3Q13133 447 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms