RNA–Protein interactions for RNA: ENST00000491438.2

CNTNAP3B-210, Transcript of contactin associated protein like 3B, humanhuman

TSL 2

Gene CNTNAP3B, Length 438 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-210ENST00000491438 MEGF6O75095 1541 aa12.8□□□□□ -0.36
CNTNAP3B-210ENST00000491438 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
CNTNAP3B-210ENST00000491438 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
CNTNAP3B-210ENST00000491438 KDRP35968 1356 aa12.8□□□□□ -0.36
CNTNAP3B-210ENST00000491438 EXOC5O00471 708 aa12.79□□□□□ -0.36
CNTNAP3B-210ENST00000491438 ANP32CO43423 234 aa12.79□□□□□ -0.36
CNTNAP3B-210ENST00000491438 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
CNTNAP3B-210ENST00000491438 USHBP1Q8N6Y0 703 aa12.79□□□□□ -0.36
CNTNAP3B-210ENST00000491438 NUDCQ9Y266 331 aa12.79□□□□□ -0.36
CNTNAP3B-210ENST00000491438 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
CNTNAP3B-210ENST00000491438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
CNTNAP3B-210ENST00000491438 BCL9O00512 1426 aa12.77□□□□□ -0.37
CNTNAP3B-210ENST00000491438 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
CNTNAP3B-210ENST00000491438 FAM196AQ6ZSG2 479 aa12.76□□□□□ -0.37
CNTNAP3B-210ENST00000491438 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
CNTNAP3B-210ENST00000491438 PCDH11XQ9BZA7 1347 aa12.76□□□□□ -0.37
CNTNAP3B-210ENST00000491438 PCDH11YQ9BZA8 1340 aa12.76□□□□□ -0.37
CNTNAP3B-210ENST00000491438 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
CNTNAP3B-210ENST00000491438 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
CNTNAP3B-210ENST00000491438 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
CNTNAP3B-210ENST00000491438 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
CNTNAP3B-210ENST00000491438 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
CNTNAP3B-210ENST00000491438 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
CNTNAP3B-210ENST00000491438 PLEKHO1Q53GL0 409 aaPredicted RBP12.73□□□□□ -0.37
CNTNAP3B-210ENST00000491438 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
CNTNAP3B-210ENST00000491438 EP400Q96L91 3159 aa12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 SOCS7O14512 581 aa12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 HMOX1P09601 288 aa12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
CNTNAP3B-210ENST00000491438 FCHSD2O94868 740 aa12.71□□□□□ -0.37
CNTNAP3B-210ENST00000491438 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
CNTNAP3B-210ENST00000491438 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
CNTNAP3B-210ENST00000491438 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
CNTNAP3B-210ENST00000491438 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
CNTNAP3B-210ENST00000491438 CYP27B1O15528 508 aa12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 NEFMP07197 916 aa12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
CNTNAP3B-210ENST00000491438 PHKG2P15735 406 aa12.68□□□□□ -0.38
CNTNAP3B-210ENST00000491438 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
CNTNAP3B-210ENST00000491438 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
CNTNAP3B-210ENST00000491438 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
CNTNAP3B-210ENST00000491438 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
CNTNAP3B-210ENST00000491438 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3B-210ENST00000491438 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
CNTNAP3B-210ENST00000491438 TRIM37O94972 964 aa12.66□□□□□ -0.38
CNTNAP3B-210ENST00000491438 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
CNTNAP3B-210ENST00000491438 DIEXFQ68CQ4 756 aaKnown RBP12.66□□□□□ -0.38
CNTNAP3B-210ENST00000491438 DCAF5Q96JK2 942 aa12.66□□□□□ -0.38
CNTNAP3B-210ENST00000491438 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
CNTNAP3B-210ENST00000491438 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
CNTNAP3B-210ENST00000491438 RGPD3A6NKT7 1758 aaPredicted RBP12.65□□□□□ -0.38
CNTNAP3B-210ENST00000491438 RGPD4Q7Z3J3 1758 aa12.65□□□□□ -0.38
CNTNAP3B-210ENST00000491438 BAG6P46379 1132 aa12.64□□□□□ -0.39
CNTNAP3B-210ENST00000491438 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
CNTNAP3B-210ENST00000491438 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
CNTNAP3B-210ENST00000491438 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
CNTNAP3B-210ENST00000491438 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
CNTNAP3B-210ENST00000491438 BTAF1O14981 1849 aa12.63□□□□□ -0.39
CNTNAP3B-210ENST00000491438 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
CNTNAP3B-210ENST00000491438 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
CNTNAP3B-210ENST00000491438 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
CNTNAP3B-210ENST00000491438 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
CNTNAP3B-210ENST00000491438 KDM6AO15550 1401 aaPredicted RBP12.62□□□□□ -0.39
CNTNAP3B-210ENST00000491438 ITGB4P16144 1822 aa12.62□□□□□ -0.39
CNTNAP3B-210ENST00000491438 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
CNTNAP3B-210ENST00000491438 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
CNTNAP3B-210ENST00000491438 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
CNTNAP3B-210ENST00000491438 MRC1P22897 1456 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 VIRMAQ69YN4 1812 aaKnown RBP12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 CCER2I3L3R5 266 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 KCNQ2O43526 872 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 APBA3O96018 575 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 PNISRQ8TF01 805 aaKnown RBP12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 ADAMTS8Q9UP79 889 aa12.61□□□□□ -0.39
CNTNAP3B-210ENST00000491438 PLSCR1O15162 318 aa12.6□□□□□ -0.39
CNTNAP3B-210ENST00000491438 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
CNTNAP3B-210ENST00000491438 MPRIPQ6WCQ1 1025 aa12.6□□□□□ -0.39
CNTNAP3B-210ENST00000491438 RNMTO43148 476 aaKnown RBP12.59□□□□□ -0.39
CNTNAP3B-210ENST00000491438 CABP4P57796 275 aa12.59□□□□□ -0.39
CNTNAP3B-210ENST00000491438 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
CNTNAP3B-210ENST00000491438 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.39
CNTNAP3B-210ENST00000491438 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
CNTNAP3B-210ENST00000491438 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
CNTNAP3B-210ENST00000491438 LMOD3Q0VAK6 560 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms