RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 PRKAR2BP31323 418 aa14.36□□□□□ -0.11
CACNA1C-227ENST00000491104 RSPH6AQ9H0K4 717 aa14.36□□□□□ -0.11
CACNA1C-227ENST00000491104 OVOS2A0A0G2JMS6 1433 aa14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 TATP17735 454 aaPredicted RBP14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 CCDC146Q8IYE0 955 aa14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 RAPGEF4Q8WZA2 1011 aa14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 ADAMTS8Q9UP79 889 aa14.35□□□□□ -0.11
CACNA1C-227ENST00000491104 SEPT12Q8IYM1 358 aa14.34□□□□□ -0.11
CACNA1C-227ENST00000491104 TNS2Q63HR2 1409 aa14.33□□□□□ -0.11
CACNA1C-227ENST00000491104 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
CACNA1C-227ENST00000491104 FCHSD2O94868 740 aa14.32□□□□□ -0.12
CACNA1C-227ENST00000491104 DDB1Q16531 1140 aa14.32□□□□□ -0.12
CACNA1C-227ENST00000491104 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
CACNA1C-227ENST00000491104 DLG5Q8TDM6 1919 aa14.31□□□□□ -0.12
CACNA1C-227ENST00000491104 ONECUT3O60422 494 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-227ENST00000491104 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
CACNA1C-227ENST00000491104 CDCA7Q9BWT1 371 aaPredicted RBP14.31□□□□□ -0.12
CACNA1C-227ENST00000491104 VIRMAQ69YN4 1812 aaKnown RBP14.31□□□□□ -0.12
CACNA1C-227ENST00000491104 MTHFSDQ2M296 383 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-227ENST00000491104 ZCRB1Q8TBF4 217 aaKnown RBP14.3□□□□□ -0.12
CACNA1C-227ENST00000491104 EXOC5O00471 708 aa14.29□□□□□ -0.12
CACNA1C-227ENST00000491104 PLEKHO1Q53GL0 409 aaPredicted RBP14.29□□□□□ -0.12
CACNA1C-227ENST00000491104 FAM182BQ5T319 152 aa14.29□□□□□ -0.12
CACNA1C-227ENST00000491104 DDX54Q8TDD1 881 aaKnown RBP14.29□□□□□ -0.12
CACNA1C-227ENST00000491104 ZNF530Q6P9A1 599 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-227ENST00000491104 MARCH10Q8NA82 808 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-227ENST00000491104 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
CACNA1C-227ENST00000491104 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
CACNA1C-227ENST00000491104 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.12
CACNA1C-227ENST00000491104 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.12
CACNA1C-227ENST00000491104 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.12
CACNA1C-227ENST00000491104 CYP27B1O15528 508 aa14.27□□□□□ -0.13
CACNA1C-227ENST00000491104 AMOTQ4VCS5 1084 aa14.27□□□□□ -0.13
CACNA1C-227ENST00000491104 RUNDC1Q96C34 613 aa14.27□□□□□ -0.13
CACNA1C-227ENST00000491104 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.13
CACNA1C-227ENST00000491104 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
CACNA1C-227ENST00000491104 SOCS7O14512 581 aa14.26□□□□□ -0.13
CACNA1C-227ENST00000491104 NEFMP07197 916 aa14.26□□□□□ -0.13
CACNA1C-227ENST00000491104 PDE3BQ13370 1112 aa14.26□□□□□ -0.13
CACNA1C-227ENST00000491104 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
CACNA1C-227ENST00000491104 PNNQ9H307 717 aaKnown RBP14.26□□□□□ -0.13
CACNA1C-227ENST00000491104 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
CACNA1C-227ENST00000491104 APAF1O14727 1248 aa14.25□□□□□ -0.13
CACNA1C-227ENST00000491104 PHKG2P15735 406 aa14.25□□□□□ -0.13
CACNA1C-227ENST00000491104 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
CACNA1C-227ENST00000491104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.13
CACNA1C-227ENST00000491104 SBF2Q86WG5 1849 aa14.25□□□□□ -0.13
CACNA1C-227ENST00000491104 SCN11AQ9UI33 1791 aa14.24□□□□□ -0.13
CACNA1C-227ENST00000491104 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
CACNA1C-227ENST00000491104 NFE2L2Q16236 605 aa14.24□□□□□ -0.13
CACNA1C-227ENST00000491104 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
CACNA1C-227ENST00000491104 KAT6BQ8WYB5 2073 aa14.24□□□□□ -0.13
CACNA1C-227ENST00000491104 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
CACNA1C-227ENST00000491104 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
CACNA1C-227ENST00000491104 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 ITGB4P16144 1822 aa14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 AKAP4Q5JQC9 854 aa14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 MPRIPQ6WCQ1 1025 aa14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 SALL2Q9Y467 1007 aaPredicted RBP14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 ADAMTS7Q9UKP4 1686 aa14.22□□□□□ -0.13
CACNA1C-227ENST00000491104 RIPK4P57078 832 aa14.21□□□□□ -0.13
CACNA1C-227ENST00000491104 DCTN1Q14203 1278 aa14.21□□□□□ -0.13
CACNA1C-227ENST00000491104 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
CACNA1C-227ENST00000491104 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
CACNA1C-227ENST00000491104 GNAT3A8MTJ3 354 aa14.2□□□□□ -0.14
CACNA1C-227ENST00000491104 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
CACNA1C-227ENST00000491104 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-227ENST00000491104 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-227ENST00000491104 MCM10Q7L590 875 aa14.19□□□□□ -0.14
CACNA1C-227ENST00000491104 THUMPD2Q9BTF0 503 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-227ENST00000491104 SIPA1L3O60292 1781 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-227ENST00000491104 PTF1AQ7RTS3 328 aa14.18□□□□□ -0.14
CACNA1C-227ENST00000491104 IL17REQ8NFR9 667 aa14.18□□□□□ -0.14
CACNA1C-227ENST00000491104 KCNQ2O43526 872 aa14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 HSP90AB1P08238 724 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 DCAF5Q96JK2 942 aa14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 BTAF1O14981 1849 aa14.17□□□□□ -0.14
CACNA1C-227ENST00000491104 BCL9O00512 1426 aa14.16□□□□□ -0.14
CACNA1C-227ENST00000491104 TNS1Q9HBL0 1735 aaKnown RBP14.16□□□□□ -0.14
CACNA1C-227ENST00000491104 MRC1P22897 1456 aa14.16□□□□□ -0.14
CACNA1C-227ENST00000491104 CEMIPQ8WUJ3 1361 aa14.15□□□□□ -0.14
CACNA1C-227ENST00000491104 TRIM37O94972 964 aa14.15□□□□□ -0.14
CACNA1C-227ENST00000491104 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-227ENST00000491104 CABP4P57796 275 aa14.14□□□□□ -0.15
CACNA1C-227ENST00000491104 HNRNPUQ00839 825 aaKnown RBP eCLIP14.14□□□□□ -0.15
CACNA1C-227ENST00000491104 LMOD3Q0VAK6 560 aa14.14□□□□□ -0.15
CACNA1C-227ENST00000491104 PAPPAQ13219 1627 aa14.13□□□□□ -0.15
CACNA1C-227ENST00000491104 HTATSF1O43719 755 aaKnown RBP14.13□□□□□ -0.15
CACNA1C-227ENST00000491104 SLC52A2Q9HAB3 445 aa14.13□□□□□ -0.15
CACNA1C-227ENST00000491104 TMOD3Q9NYL9 352 aa14.13□□□□□ -0.15
CACNA1C-227ENST00000491104 ERVV-2B6SEH9 535 aa14.12□□□□□ -0.15
CACNA1C-227ENST00000491104 TEFQ10587 303 aa14.12□□□□□ -0.15
CACNA1C-227ENST00000491104 WWC1Q8IX03 1113 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms