RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-212ENST00000490723 MAN1A2O60476 641 aa8.83□□□□□ -1
PHC3-212ENST00000490723 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
PHC3-212ENST00000490723 OSBPL3Q9H4L5 887 aa8.83□□□□□ -1
PHC3-212ENST00000490723 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
PHC3-212ENST00000490723 FIGNL2A6NMB9 653 aa8.82□□□□□ -1
PHC3-212ENST00000490723 TTLL8A6PVC2 850 aa8.82□□□□□ -1
PHC3-212ENST00000490723 SKIP12755 728 aa8.82□□□□□ -1
PHC3-212ENST00000490723 CTSOP43234 321 aaPredicted RBP8.82□□□□□ -1
PHC3-212ENST00000490723 POLMQ9NP87 494 aaPredicted RBP8.82□□□□□ -1
PHC3-212ENST00000490723 MEN1O00255 615 aa8.81□□□□□ -1
PHC3-212ENST00000490723 USP4Q13107 963 aa8.81□□□□□ -1
PHC3-212ENST00000490723 CYP2U1Q7Z449 544 aa8.81□□□□□ -1
PHC3-212ENST00000490723 GLMNQ92990 594 aa8.81□□□□□ -1
PHC3-212ENST00000490723 ZNF775Q96BV0 537 aaPredicted RBP8.81□□□□□ -1
PHC3-212ENST00000490723 CHIC2Q9UKJ5 165 aa8.81□□□□□ -1
PHC3-212ENST00000490723 TRAK2O60296 914 aa8.8□□□□□ -1
PHC3-212ENST00000490723 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
PHC3-212ENST00000490723 DNMT3LQ9UJW3 386 aa8.8□□□□□ -1
PHC3-212ENST00000490723 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
PHC3-212ENST00000490723 A0A1W2PRU2 124 aa8.79□□□□□ -1
PHC3-212ENST00000490723 CALR3Q96L12 384 aaKnown RBP8.79□□□□□ -1
PHC3-212ENST00000490723 ARHGEF10LQ9HCE6 1279 aa8.79□□□□□ -1
PHC3-212ENST00000490723 RAB6BQ9NRW1 208 aa8.79□□□□□ -1
PHC3-212ENST00000490723 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
PHC3-212ENST00000490723 SIRT1Q96EB6 747 aa8.78□□□□□ -1
PHC3-212ENST00000490723 ZMYND15Q9H091 742 aa8.78□□□□□ -1
PHC3-212ENST00000490723 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
PHC3-212ENST00000490723 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
PHC3-212ENST00000490723 UCN2Q96RP3 112 aa8.77□□□□□ -1.01
PHC3-212ENST00000490723 USP17L5A8MUK1 530 aa8.76□□□□□ -1.01
PHC3-212ENST00000490723 STAU1O95793 577 aaKnown RBP8.76□□□□□ -1.01
PHC3-212ENST00000490723 NCOA4Q13772 614 aa8.76□□□□□ -1.01
PHC3-212ENST00000490723 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.76□□□□□ -1.01
PHC3-212ENST00000490723 EML3Q32P44 896 aa8.76□□□□□ -1.01
PHC3-212ENST00000490723 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
PHC3-212ENST00000490723 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
PHC3-212ENST00000490723 RNF217Q8TC41 542 aa8.76□□□□□ -1.01
PHC3-212ENST00000490723 GNRH1P01148 92 aa8.75□□□□□ -1.01
PHC3-212ENST00000490723 VEGFBP49765 207 aa8.74□□□□□ -1.01
PHC3-212ENST00000490723 CLN3Q13286 438 aa8.74□□□□□ -1.01
PHC3-212ENST00000490723 NOD1Q9Y239 953 aa8.74□□□□□ -1.01
PHC3-212ENST00000490723 ATP9BO43861 1147 aa8.73□□□□□ -1.01
PHC3-212ENST00000490723 RNF144AP50876 292 aaPredicted RBP8.73□□□□□ -1.01
PHC3-212ENST00000490723 SLC27A3Q5K4L6 730 aa8.73□□□□□ -1.01
PHC3-212ENST00000490723 PRICKLE2Q7Z3G6 844 aa8.73□□□□□ -1.01
PHC3-212ENST00000490723 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
PHC3-212ENST00000490723 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
PHC3-212ENST00000490723 NXF1Q9UBU9 619 aaKnown RBP8.73□□□□□ -1.01
PHC3-212ENST00000490723 USP17L3A6NCW0 530 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 USP17L4A6NCW7 530 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
PHC3-212ENST00000490723 IL2RAP01589 272 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 USP17L2Q6R6M4 530 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 USP17L1Q7RTZ2 530 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 LYSMD3Q7Z3D4 306 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 C14orf37Q86TY3 774 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 ETNK1Q9HBU6 452 aa8.72□□□□□ -1.01
PHC3-212ENST00000490723 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
PHC3-212ENST00000490723 RHOQP17081 205 aa8.71□□□□□ -1.02
PHC3-212ENST00000490723 PTSQ03393 145 aa8.71□□□□□ -1.02
PHC3-212ENST00000490723 PSME1Q06323 249 aa8.71□□□□□ -1.02
PHC3-212ENST00000490723 ESCO1Q5FWF5 840 aa8.71□□□□□ -1.02
PHC3-212ENST00000490723 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.02
PHC3-212ENST00000490723 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
PHC3-212ENST00000490723 GPC1P35052 558 aa8.7□□□□□ -1.02
PHC3-212ENST00000490723 GDF10P55107 478 aa8.7□□□□□ -1.02
PHC3-212ENST00000490723 GTF2IP78347 998 aa8.7□□□□□ -1.02
PHC3-212ENST00000490723 CENPCQ03188 943 aa8.7□□□□□ -1.02
PHC3-212ENST00000490723 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
PHC3-212ENST00000490723 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
PHC3-212ENST00000490723 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
PHC3-212ENST00000490723 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
PHC3-212ENST00000490723 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
PHC3-212ENST00000490723 WFS1O76024 890 aa8.68□□□□□ -1.02
PHC3-212ENST00000490723 SCNN1DP51172 638 aa8.68□□□□□ -1.02
PHC3-212ENST00000490723 POU4F2Q12837 409 aa8.68□□□□□ -1.02
PHC3-212ENST00000490723 SLC16A10Q8TF71 515 aa8.68□□□□□ -1.02
PHC3-212ENST00000490723 GRIP2Q9C0E4 1043 aa8.68□□□□□ -1.02
PHC3-212ENST00000490723 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
PHC3-212ENST00000490723 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
PHC3-212ENST00000490723 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
PHC3-212ENST00000490723 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
PHC3-212ENST00000490723 INHAP05111 366 aa8.67□□□□□ -1.02
PHC3-212ENST00000490723 LMOD1P29536 600 aaPredicted RBP8.67□□□□□ -1.02
PHC3-212ENST00000490723 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
PHC3-212ENST00000490723 TRIM50Q86XT4 487 aa8.67□□□□□ -1.02
PHC3-212ENST00000490723 CCDC155Q8N6L0 562 aa8.67□□□□□ -1.02
PHC3-212ENST00000490723 ZSCAN10Q96SZ4 725 aaPredicted RBP8.67□□□□□ -1.02
PHC3-212ENST00000490723 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
PHC3-212ENST00000490723 TMEM229AB2RXF0 380 aa8.66□□□□□ -1.02
PHC3-212ENST00000490723 GTF2E1P29083 439 aaPredicted RBP8.66□□□□□ -1.02
PHC3-212ENST00000490723 TLR1Q15399 786 aa8.66□□□□□ -1.02
PHC3-212ENST00000490723 TMEM214Q6NUQ4 689 aaKnown RBP8.66□□□□□ -1.02
PHC3-212ENST00000490723 HRH3Q9Y5N1 445 aa8.66□□□□□ -1.02
PHC3-212ENST00000490723 SLC35F4A4IF30 521 aa8.65□□□□□ -1.02
PHC3-212ENST00000490723 H3BM21 787 aa8.65□□□□□ -1.02
PHC3-212ENST00000490723 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
PHC3-212ENST00000490723 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
PHC3-212ENST00000490723 OGFOD1Q8N543 542 aa8.65□□□□□ -1.02
PHC3-212ENST00000490723 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms