RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 GIGYF1O75420 1035 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 KCNA1Q09470 495 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 EML3Q32P44 896 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 CRTC2Q53ET0 693 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 BPHLQ86WA6 291 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 PHTF2Q8N3S3 785 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 CHMP7Q8WUX9 453 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 PTPRMP28827 1452 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
SSX2IP-208ENST00000490476 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
SSX2IP-208ENST00000490476 ZNF511Q8NB15 262 aa8.31□□□□□ -1.08
SSX2IP-208ENST00000490476 ATP5J2-PTCD1G3V325 749 aa8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 RANGAP1P46060 587 aaPredicted RBP8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 ERFEQ4G0M1 354 aa8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 SLC10A4Q96EP9 437 aa8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 ZNF594Q96JF6 807 aaPredicted RBP8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 DOLKQ9UPQ8 538 aa8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 IVNS1ABPQ9Y6Y0 642 aa8.3□□□□□ -1.08
SSX2IP-208ENST00000490476 FAM196BA6NMK8 535 aa8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 RAB15P59190 212 aa8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 MAP7D1Q3KQU3 841 aa8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 C4orf48Q5BLP8 95 aa8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
SSX2IP-208ENST00000490476 PTK7Q13308 1070 aa8.28□□□□□ -1.08
SSX2IP-208ENST00000490476 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
SSX2IP-208ENST00000490476 NOD1Q9Y239 953 aa8.28□□□□□ -1.08
SSX2IP-208ENST00000490476 SRCAPQ6ZRS2 3230 aa8.27□□□□□ -1.08
SSX2IP-208ENST00000490476 ADAMTSL3P82987 1691 aa8.27□□□□□ -1.08
SSX2IP-208ENST00000490476 COL17A1Q9UMD9 1497 aaPredicted RBP8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 MFAP1P55081 439 aaKnown RBP8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 DPYDQ12882 1025 aa8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 TRAF7Q6Q0C0 670 aa8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 ANKMY2Q8IV38 441 aa8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 SHROOM2Q13796 1616 aa8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 MROH2BQ7Z745 1585 aa8.27□□□□□ -1.09
SSX2IP-208ENST00000490476 WDR97A6NE52 1622 aa8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 SH3BP2P78314 561 aa8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 CLDN10P78369 228 aa8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 DNAAF2Q9NVR5 837 aaKnown RBP8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 PCDHB11Q9Y5F2 797 aa8.26□□□□□ -1.09
SSX2IP-208ENST00000490476 PSME1Q06323 249 aa8.25□□□□□ -1.09
SSX2IP-208ENST00000490476 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
SSX2IP-208ENST00000490476 CDCA7Q9BWT1 371 aaPredicted RBP8.25□□□□□ -1.09
SSX2IP-208ENST00000490476 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
SSX2IP-208ENST00000490476 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
SSX2IP-208ENST00000490476 ADCY10Q96PN6 1610 aa8.25□□□□□ -1.09
SSX2IP-208ENST00000490476 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
SSX2IP-208ENST00000490476 GTF2IP78347 998 aa8.24□□□□□ -1.09
SSX2IP-208ENST00000490476 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
SSX2IP-208ENST00000490476 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
SSX2IP-208ENST00000490476 RBM19Q9Y4C8 960 aaKnown RBP8.24□□□□□ -1.09
SSX2IP-208ENST00000490476 RNF223E7ERA6 249 aa8.23□□□□□ -1.09
SSX2IP-208ENST00000490476 HSPA2P54652 639 aa8.23□□□□□ -1.09
SSX2IP-208ENST00000490476 PBRM1Q86U86 1689 aa8.23□□□□□ -1.09
SSX2IP-208ENST00000490476 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 IQSEC2Q5JU85 1478 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 TRIM32Q13049 653 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 ARID5BQ14865 1188 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 LAPTM4AQ15012 233 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 PLA2G2CQ5R387 149 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 KIAA1024Q9UPX6 916 aa8.22□□□□□ -1.09
SSX2IP-208ENST00000490476 LGR5O75473 907 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 GGCXP38435 758 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 PPP1R18Q6NYC8 613 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 LARGE2Q8N3Y3 721 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 TPCN2Q8NHX9 752 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 KCTD15Q96SI1 283 aaPredicted RBP8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
SSX2IP-208ENST00000490476 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 SSFA2P28290 1259 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 USP4Q13107 963 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 FOXD4L5Q5VV16 416 aaPredicted RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 PHLDB3Q6NSJ2 640 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 VASH1Q7L8A9 365 aaPredicted RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 RGS22Q8NE09 1264 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 CCER1Q8TC90 406 aaPredicted RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 FOXD4L4Q8WXT5 416 aaPredicted RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 V9GY48 417 aaPredicted RBP8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 LTBP4Q8N2S1 1624 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
SSX2IP-208ENST00000490476 SFI1A8K8P3 1242 aa8.19□□□□□ -1.1
SSX2IP-208ENST00000490476 ESPNB1AK53 854 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms