RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 DNAJC14Q6Y2X3 702 aaPredicted RBP10.37□□□□□ -0.75
TM9SF3-206ENST00000490192 ERCC3P19447 782 aa10.36□□□□□ -0.75
TM9SF3-206ENST00000490192 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
TM9SF3-206ENST00000490192 USP35Q9P2H5 1018 aa10.36□□□□□ -0.75
TM9SF3-206ENST00000490192 RASA1P20936 1047 aa10.35□□□□□ -0.75
TM9SF3-206ENST00000490192 PTK7Q13308 1070 aa10.35□□□□□ -0.75
TM9SF3-206ENST00000490192 FOXJ1Q92949 421 aa10.35□□□□□ -0.75
TM9SF3-206ENST00000490192 CLP1Q92989 425 aaKnown RBP10.35□□□□□ -0.75
TM9SF3-206ENST00000490192 SOWAHDA6NJG2 315 aa10.34□□□□□ -0.75
TM9SF3-206ENST00000490192 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
TM9SF3-206ENST00000490192 NCOA4Q13772 614 aa10.34□□□□□ -0.75
TM9SF3-206ENST00000490192 ARID5BQ14865 1188 aa10.34□□□□□ -0.75
TM9SF3-206ENST00000490192 MPNDQ8N594 471 aa10.34□□□□□ -0.75
TM9SF3-206ENST00000490192 IGSF5Q9NSI5 407 aa10.34□□□□□ -0.75
TM9SF3-206ENST00000490192 ZC3H4Q9UPT8 1303 aaKnown RBP10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 POTECB2RU33 542 aa10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 SERPINB4P48594 390 aa10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 CDCA7Q9BWT1 371 aaPredicted RBP10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 KIAA1522Q9P206 1035 aaPredicted RBP10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 DACH1Q9UI36 760 aa10.33□□□□□ -0.76
TM9SF3-206ENST00000490192 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 ATP2B4P23634 1241 aa10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 NOM1Q5C9Z4 860 aaKnown RBP10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 CEP126Q9P2H0 1117 aa10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
TM9SF3-206ENST00000490192 RNF135Q8IUD6 432 aa10.31□□□□□ -0.76
TM9SF3-206ENST00000490192 ANKMY2Q8IV38 441 aa10.31□□□□□ -0.76
TM9SF3-206ENST00000490192 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
TM9SF3-206ENST00000490192 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
TM9SF3-206ENST00000490192 ATP13A2Q9NQ11 1180 aa10.3□□□□□ -0.76
TM9SF3-206ENST00000490192 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
TM9SF3-206ENST00000490192 MAGEB6P1A0A0J9YX57 407 aa10.29□□□□□ -0.76
TM9SF3-206ENST00000490192 ZNF16P17020 682 aaPredicted RBP10.29□□□□□ -0.76
TM9SF3-206ENST00000490192 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
TM9SF3-206ENST00000490192 PLPP7Q8NBV4 271 aa10.29□□□□□ -0.76
TM9SF3-206ENST00000490192 SIRT1Q96EB6 747 aa10.29□□□□□ -0.76
TM9SF3-206ENST00000490192 BCL2L13Q9BXK5 485 aa10.29□□□□□ -0.76
TM9SF3-206ENST00000490192 SCNN1AP37088 669 aa10.28□□□□□ -0.76
TM9SF3-206ENST00000490192 DPYDQ12882 1025 aa10.28□□□□□ -0.76
TM9SF3-206ENST00000490192 NNTQ13423 1086 aa10.28□□□□□ -0.76
TM9SF3-206ENST00000490192 PHTF2Q8N3S3 785 aa10.28□□□□□ -0.76
TM9SF3-206ENST00000490192 BIN2Q9UBW5 565 aaPredicted RBP10.28□□□□□ -0.76
TM9SF3-206ENST00000490192 PCDHB9Q9Y5E1 797 aa10.28□□□□□ -0.76
TM9SF3-206ENST00000490192 LZTS3O60299 673 aaPredicted RBP10.27□□□□□ -0.77
TM9SF3-206ENST00000490192 ADH1CP00326 375 aa10.27□□□□□ -0.77
TM9SF3-206ENST00000490192 OGFOD1Q8N543 542 aa10.27□□□□□ -0.77
TM9SF3-206ENST00000490192 ZNF775Q96BV0 537 aaPredicted RBP10.27□□□□□ -0.77
TM9SF3-206ENST00000490192 CDK15Q96Q40 435 aa10.27□□□□□ -0.77
TM9SF3-206ENST00000490192 PTK2Q05397 1052 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 NR5A1Q13285 461 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 SWI5Q1ZZU3 235 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 EML3Q32P44 896 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 PDXDC2PQ6P474 469 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 KIFC2Q96AC6 838 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
TM9SF3-206ENST00000490192 MCCD1P59942 119 aaPredicted RBP10.25□□□□□ -0.77
TM9SF3-206ENST00000490192 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
TM9SF3-206ENST00000490192 GIPC2Q8TF65 315 aa10.25□□□□□ -0.77
TM9SF3-206ENST00000490192 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
TM9SF3-206ENST00000490192 ARHGAP9Q9BRR9 750 aa10.25□□□□□ -0.77
TM9SF3-206ENST00000490192 GPSM3Q9Y4H4 160 aa10.25□□□□□ -0.77
TM9SF3-206ENST00000490192 WDR4P57081 412 aaKnown RBP10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 CLDN10P78369 228 aa10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 SH3RF1Q7Z6J0 888 aa10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 ZBTB33Q86T24 672 aa10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 OCSTAMPQ9BR26 566 aa10.24□□□□□ -0.77
TM9SF3-206ENST00000490192 MAP7D1Q3KQU3 841 aa10.23□□□□□ -0.77
TM9SF3-206ENST00000490192 DNAAF2Q9NVR5 837 aaKnown RBP10.23□□□□□ -0.77
TM9SF3-206ENST00000490192 CHIC2Q9UKJ5 165 aa10.23□□□□□ -0.77
TM9SF3-206ENST00000490192 ANKRD33BA6NCL7 494 aa10.22□□□□□ -0.77
TM9SF3-206ENST00000490192 TRIM50Q86XT4 487 aa10.22□□□□□ -0.77
TM9SF3-206ENST00000490192 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
TM9SF3-206ENST00000490192 C1orf216Q8TAB5 229 aa10.22□□□□□ -0.77
TM9SF3-206ENST00000490192 TRIM47Q96LD4 638 aa10.22□□□□□ -0.77
TM9SF3-206ENST00000490192 PRMT3O60678 531 aa10.21□□□□□ -0.77
TM9SF3-206ENST00000490192 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
TM9SF3-206ENST00000490192 C1QTNF2Q9BXJ5 285 aa10.21□□□□□ -0.77
TM9SF3-206ENST00000490192 GRM5P41594 1212 aa10.2□□□□□ -0.78
TM9SF3-206ENST00000490192 SCARF1Q14162 830 aa10.2□□□□□ -0.78
TM9SF3-206ENST00000490192 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
TM9SF3-206ENST00000490192 TRMT44Q8IYL2 757 aaKnown RBP10.2□□□□□ -0.78
TM9SF3-206ENST00000490192 NOD1Q9Y239 953 aa10.2□□□□□ -0.78
TM9SF3-206ENST00000490192 MAP4K5Q9Y4K4 846 aa10.2□□□□□ -0.78
TM9SF3-206ENST00000490192 ZIC2O95409 532 aaPredicted RBP10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 ABL1P00519 1130 aa10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 BMP1P13497 986 aa10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 ERFEQ4G0M1 354 aa10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 LARGE2Q8N3Y3 721 aa10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 CDV3Q9UKY7 258 aaKnown RBP10.19□□□□□ -0.78
TM9SF3-206ENST00000490192 TCF3P15923 654 aa10.18□□□□□ -0.78
TM9SF3-206ENST00000490192 TIMP2P16035 220 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms