RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 AIMP1Q12904 312 aaKnown RBP10.4□□□□□ -0.74
LSAMP-205ENST00000490035 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
LSAMP-205ENST00000490035 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-205ENST00000490035 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 GGNBP2Q9H3C7 697 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 SH2B1Q9NRF2 756 aaPredicted RBP10.4□□□□□ -0.74
LSAMP-205ENST00000490035 SNAPC4Q5SXM2 1469 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 LARP1BQ659C4 914 aaKnown RBP10.4□□□□□ -0.74
LSAMP-205ENST00000490035 NEMFO60524 1076 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
LSAMP-205ENST00000490035 ME1P48163 572 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 FAM107BQ9H098 131 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
LSAMP-205ENST00000490035 CCDC83Q8IWF9 413 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 AXDND1Q5T1B0 1012 aaPredicted RBP10.39□□□□□ -0.75
LSAMP-205ENST00000490035 RAB34Q9BZG1 259 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 ZSCAN12O43309 604 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 KIF20AO95235 890 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 MPHOSPH8Q99549 860 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 TSPYL1Q9H0U9 437 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 CABP4P57796 275 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 SCAND2PQ9GZW5 306 aaPredicted RBP10.39□□□□□ -0.75
LSAMP-205ENST00000490035 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
LSAMP-205ENST00000490035 KIF1BPQ96EK5 621 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 GLRX3O76003 335 aaKnown RBP10.38□□□□□ -0.75
LSAMP-205ENST00000490035 NUP62CLQ9H1M0 184 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 RRP9O43818 475 aaKnown RBP10.38□□□□□ -0.75
LSAMP-205ENST00000490035 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
LSAMP-205ENST00000490035 SPATA32Q96LK8 384 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 GRPEL1Q9HAV7 217 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 GOLGA6L9A6NEM1 432 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 PATL2C9JE40 543 aaKnown RBP10.38□□□□□ -0.75
LSAMP-205ENST00000490035 NEFHP12036 1026 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 KIAA0586Q9BVV6 1533 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 AMOTQ4VCS5 1084 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
LSAMP-205ENST00000490035 TNIP1Q15025 636 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 VPS36Q86VN1 386 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 TXNDC2Q86VQ3 553 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 UBAC1Q9BSL1 405 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 DNAJC2Q99543 621 aaKnown RBP10.37□□□□□ -0.75
LSAMP-205ENST00000490035 MAP3K11Q16584 847 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 CEP126Q9P2H0 1117 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 PTPRCP08575 1304 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 STARD3NLO95772 234 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 PRAM1Q96QH2 718 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 FIBPO43427 364 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 DDX11Q96FC9 970 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 MCM5P33992 734 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 PCF11O94913 1555 aaKnown RBP10.37□□□□□ -0.75
LSAMP-205ENST00000490035 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 BIVM-ERCC5R4GMW8 1640 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 NFE2L2Q16236 605 aa10.37□□□□□ -0.75
LSAMP-205ENST00000490035 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 HSP90AB3PQ58FF7 597 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 CCDC91Q7Z6B0 441 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
LSAMP-205ENST00000490035 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 PDCL3Q9H2J4 239 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 DDX12PQ92771 950 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 UPF3BQ9BZI7 483 aaKnown RBP10.36□□□□□ -0.75
LSAMP-205ENST00000490035 PDRG1Q9NUG6 133 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 GNAT3A8MTJ3 354 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 TUBB4BP68371 445 aa10.36□□□□□ -0.75
LSAMP-205ENST00000490035 ANO10Q9NW15 660 aa10.35□□□□□ -0.75
LSAMP-205ENST00000490035 NESP48681 1621 aa10.35□□□□□ -0.75
LSAMP-205ENST00000490035 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
LSAMP-205ENST00000490035 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
LSAMP-205ENST00000490035 FYB1O15117 783 aa10.35□□□□□ -0.75
LSAMP-205ENST00000490035 GSDMDP57764 484 aa10.35□□□□□ -0.75
LSAMP-205ENST00000490035 LARP1Q6PKG0 1096 aaKnown RBP10.35□□□□□ -0.75
LSAMP-205ENST00000490035 FEZ1Q99689 392 aa10.35□□□□□ -0.75
LSAMP-205ENST00000490035 KANK3Q6NY19 840 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 TAF4BQ92750 862 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 IGHMBP2P38935 993 aaKnown RBP10.34□□□□□ -0.75
LSAMP-205ENST00000490035 CCDC183Q5T5S1 534 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 SULT6B1Q6IMI4 303 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 ANKLE2Q86XL3 938 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 ABCA10Q8WWZ4 1543 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 CFAP70Q5T0N1 1121 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 RNF41Q9H4P4 317 aaPredicted RBP10.34□□□□□ -0.75
LSAMP-205ENST00000490035 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 CCDC61Q9Y6R9 512 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
LSAMP-205ENST00000490035 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 RNF214Q8ND24 703 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 TSG101Q99816 390 aa10.34□□□□□ -0.75
LSAMP-205ENST00000490035 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
LSAMP-205ENST00000490035 CAMSAP2Q08AD1 1489 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 MCM4P33991 863 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 KIF18AQ8NI77 898 aa10.33□□□□□ -0.76
LSAMP-205ENST00000490035 SEC63Q9UGP8 760 aaKnown RBP10.33□□□□□ -0.76
LSAMP-205ENST00000490035 SRGAP3O43295 1099 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms