RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CARD14Q9BXL6 1004 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 UNC93B1Q9H1C4 597 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 WBP1LQ9NX94 342 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 CXXC1Q9P0U4 656 aaPredicted RBP5.32□□□□□ -1.56
GPNMB-212ENST00000487890 MRC2Q9UBG0 1479 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 CEP164Q9UPV0 1460 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 PRDM2Q13029 1718 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 ABL1P00519 1130 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 NPAS4Q8IUM7 802 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 CCDC24Q8N4L8 307 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 TPCN2Q8NHX9 752 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 GIPC2Q8TF65 315 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 WNT2BQ93097 391 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 HS3ST6Q96QI5 342 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 PCDHGA11Q9Y5H2 935 aa5.31□□□□□ -1.56
GPNMB-212ENST00000487890 MAGEB6P1A0A0J9YX57 407 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 TLL1O43897 1013 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 ZNF211Q13398 564 aaPredicted RBP5.3□□□□□ -1.56
GPNMB-212ENST00000487890 ECM1Q16610 540 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 SH3RF1Q7Z6J0 888 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 FOXJ1Q92949 421 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 STAC3Q96MF2 364 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 USP35Q9P2H5 1018 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 SEPT3Q9UH03 358 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 FANCD2Q9BXW9 1451 aa5.3□□□□□ -1.56
GPNMB-212ENST00000487890 ICMTO60725 284 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 ADH1BP00325 375 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 TAGLNQ01995 201 aaKnown RBP5.29□□□□□ -1.56
GPNMB-212ENST00000487890 ERFEQ4G0M1 354 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 C4orf48Q5BLP8 95 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 CAPN12Q6ZSI9 719 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 GAS2L2Q8NHY3 880 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 BAP1Q92560 729 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 HINFPQ9BQA5 517 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 EGFL7Q9UHF1 273 aa5.29□□□□□ -1.56
GPNMB-212ENST00000487890 H3BRB1 525 aa5.28□□□□□ -1.56
GPNMB-212ENST00000487890 PSME1Q06323 249 aa5.28□□□□□ -1.56
GPNMB-212ENST00000487890 LINC01559Q495D7 138 aa5.28□□□□□ -1.56
GPNMB-212ENST00000487890 ANKRD13DQ6ZTN6 518 aa5.28□□□□□ -1.56
GPNMB-212ENST00000487890 GTF3C2Q8WUA4 911 aaPredicted RBP5.28□□□□□ -1.56
GPNMB-212ENST00000487890 PURBQ96QR8 312 aaKnown RBP5.28□□□□□ -1.56
GPNMB-212ENST00000487890 TUT1Q9H6E5 874 aaKnown RBP5.28□□□□□ -1.56
GPNMB-212ENST00000487890 RBM19Q9Y4C8 960 aaKnown RBP5.28□□□□□ -1.56
GPNMB-212ENST00000487890 DNMT3AQ9Y6K1 912 aaPredicted RBP5.28□□□□□ -1.56
GPNMB-212ENST00000487890 WDR62O43379 1518 aa5.28□□□□□ -1.56
GPNMB-212ENST00000487890 ESPNB1AK53 854 aa5.27□□□□□ -1.57
GPNMB-212ENST00000487890 ZPR1O75312 459 aa5.27□□□□□ -1.57
GPNMB-212ENST00000487890 AGERQ15109 404 aa5.27□□□□□ -1.57
GPNMB-212ENST00000487890 RNF20Q5VTR2 975 aa5.27□□□□□ -1.57
GPNMB-212ENST00000487890 MKNK1Q9BUB5 465 aa5.27□□□□□ -1.57
GPNMB-212ENST00000487890 PCDHB11Q9Y5F2 797 aa5.27□□□□□ -1.57
GPNMB-212ENST00000487890 CFTRP13569 1480 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 WEE1P30291 646 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 USP4Q13107 963 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 MTMR3Q13615 1198 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 FBXO33Q7Z6M2 555 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 BPHLQ86WA6 291 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-212ENST00000487890 GLYCTKQ8IVS8 523 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 TSEN2Q8NCE0 465 aaKnown RBP5.26□□□□□ -1.57
GPNMB-212ENST00000487890 CCDC88BA6NC98 1476 aa5.26□□□□□ -1.57
GPNMB-212ENST00000487890 C21orf2O43822 256 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 MAPK1P28482 360 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 ARHGAP4P98171 946 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 FKBP4Q02790 459 aaKnown RBP eCLIP5.25□□□□□ -1.57
GPNMB-212ENST00000487890 FKBP5Q13451 457 aaPredicted RBP5.25□□□□□ -1.57
GPNMB-212ENST00000487890 ZNF326Q5BKZ1 582 aaKnown RBP5.25□□□□□ -1.57
GPNMB-212ENST00000487890 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
GPNMB-212ENST00000487890 ZNF511Q8NB15 262 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.25□□□□□ -1.57
GPNMB-212ENST00000487890 ZNF516Q92618 1163 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 SLC10A4Q96EP9 437 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 C1QTNF2Q9BXJ5 285 aa5.25□□□□□ -1.57
GPNMB-212ENST00000487890 URB2Q14146 1524 aaKnown RBP5.24□□□□□ -1.57
GPNMB-212ENST00000487890 TCF3P15923 654 aa5.24□□□□□ -1.57
GPNMB-212ENST00000487890 NAA30Q147X3 362 aaPredicted RBP5.24□□□□□ -1.57
GPNMB-212ENST00000487890 FAM163AQ96GL9 167 aaPredicted RBP5.24□□□□□ -1.57
GPNMB-212ENST00000487890 ASB16Q96NS5 453 aa5.24□□□□□ -1.57
GPNMB-212ENST00000487890 MTRQ99707 1265 aa5.24□□□□□ -1.57
GPNMB-212ENST00000487890 SLC6A16Q9GZN6 736 aa5.24□□□□□ -1.57
GPNMB-212ENST00000487890 DCTN4Q9UJW0 460 aa5.24□□□□□ -1.57
GPNMB-212ENST00000487890 M0R2N6 131 aa5.23□□□□□ -1.57
GPNMB-212ENST00000487890 RAB15P59190 212 aa5.23□□□□□ -1.57
GPNMB-212ENST00000487890 SF3B2Q13435 895 aaKnown RBP5.23□□□□□ -1.57
GPNMB-212ENST00000487890 NBPF20Q3BBV1 942 aa5.23□□□□□ -1.57
GPNMB-212ENST00000487890 TJAP1Q5JTD0 557 aa5.23□□□□□ -1.57
GPNMB-212ENST00000487890 THSD4Q6ZMP0 1018 aa5.23□□□□□ -1.57
GPNMB-212ENST00000487890 PCDH10Q9P2E7 1040 aa5.23□□□□□ -1.57
GPNMB-212ENST00000487890 TMEM229AB2RXF0 380 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 STAU1O95793 577 aaKnown RBP5.22□□□□□ -1.57
GPNMB-212ENST00000487890 VAMP1P23763 118 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 SCTRP47872 440 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 SH3BP2P78314 561 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 TRMT44Q8IYL2 757 aaKnown RBP5.22□□□□□ -1.57
GPNMB-212ENST00000487890 SEPT12Q8IYM1 358 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 NKX2-3Q8TAU0 364 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 ZNF358Q9NW07 568 aa5.22□□□□□ -1.57
GPNMB-212ENST00000487890 PTCD1O75127 700 aaKnown RBP5.21□□□□□ -1.58
GPNMB-212ENST00000487890 S1PR4O95977 384 aa5.21□□□□□ -1.58
GPNMB-212ENST00000487890 ZSCAN29Q8IWY8 852 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms