RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 VAMP4O75379 141 aa26.08■■□□□ 1.77
PHF1-209ENST00000487667 DCTN1Q14203 1278 aa26.08■■□□□ 1.77
PHF1-209ENST00000487667 NBPF6Q5VWK0 638 aa26.08■■□□□ 1.77
PHF1-209ENST00000487667 NBPF4Q96M43 638 aa26.08■■□□□ 1.77
PHF1-209ENST00000487667 CRB1P82279 1406 aa26.08■■□□□ 1.77
PHF1-209ENST00000487667 SOS2Q07890 1332 aaPredicted RBP26.08■■□□□ 1.77
PHF1-209ENST00000487667 AMOTQ4VCS5 1084 aa26.08■■□□□ 1.76
PHF1-209ENST00000487667 FTSJ3Q8IY81 847 aaKnown RBP26.08■■□□□ 1.76
PHF1-209ENST00000487667 ANKRD24Q8TF21 1146 aa26.08■■□□□ 1.76
PHF1-209ENST00000487667 BCL2L13Q9BXK5 485 aa26.08■■□□□ 1.76
PHF1-209ENST00000487667 PLEKHG2Q9H7P9 1386 aa26.07■■□□□ 1.76
PHF1-209ENST00000487667 CAMTA1Q9Y6Y1 1673 aa26.07■■□□□ 1.76
PHF1-209ENST00000487667 TWISTNBQ3B726 338 aaPredicted RBP26.07■■□□□ 1.76
PHF1-209ENST00000487667 MCM10Q7L590 875 aa26.07■■□□□ 1.76
PHF1-209ENST00000487667 DZIP1LQ8IYY4 767 aaKnown RBP26.07■■□□□ 1.76
PHF1-209ENST00000487667 ATF7IPQ6VMQ6 1270 aa26.06■■□□□ 1.76
PHF1-209ENST00000487667 CENPQQ7L2Z9 268 aaPredicted RBP26.06■■□□□ 1.76
PHF1-209ENST00000487667 CPDO75976 1380 aa26.06■■□□□ 1.76
PHF1-209ENST00000487667 ARHGAP45Q92619 1136 aa26.06■■□□□ 1.76
PHF1-209ENST00000487667 PLEKHO1Q53GL0 409 aaPredicted RBP26.04■■□□□ 1.76
PHF1-209ENST00000487667 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
PHF1-209ENST00000487667 TOM1O60784 492 aa26.04■■□□□ 1.76
PHF1-209ENST00000487667 LRRC37A3O60309 1634 aa26.04■■□□□ 1.76
PHF1-209ENST00000487667 CLUAP1Q96AJ1 413 aa26.03■■□□□ 1.76
PHF1-209ENST00000487667 COG6Q9Y2V7 657 aa26.03■■□□□ 1.76
PHF1-209ENST00000487667 ERBB3P21860 1342 aa26.03■■□□□ 1.76
PHF1-209ENST00000487667 SOS1Q07889 1333 aaPredicted RBP26.03■■□□□ 1.76
PHF1-209ENST00000487667 CRYBG1Q9Y4K1 1723 aa26.02■■□□□ 1.76
PHF1-209ENST00000487667 ZC3H6P61129 1189 aaKnown RBP26.02■■□□□ 1.76
PHF1-209ENST00000487667 CHMP4BQ9H444 224 aaKnown RBP26.02■■□□□ 1.76
PHF1-209ENST00000487667 FAM208AQ9UK61 1670 aaKnown RBP26.02■■□□□ 1.76
PHF1-209ENST00000487667 MVPQ14764 893 aaKnown RBP26.01■■□□□ 1.75
PHF1-209ENST00000487667 NOB1Q9ULX3 412 aaKnown RBP26.01■■□□□ 1.75
PHF1-209ENST00000487667 USHBP1Q8N6Y0 703 aa26■■□□□ 1.75
PHF1-209ENST00000487667 DDX19BQ9UMR2 479 aa26■■□□□ 1.75
PHF1-209ENST00000487667 TRIM27P14373 513 aa25.99■■□□□ 1.75
PHF1-209ENST00000487667 PIP4K2BP78356 416 aa25.99■■□□□ 1.75
PHF1-209ENST00000487667 C8orf58Q8NAV2 365 aa25.99■■□□□ 1.75
PHF1-209ENST00000487667 TSPYL4Q9UJ04 414 aa25.99■■□□□ 1.75
PHF1-209ENST00000487667 AXIN2Q9Y2T1 843 aa25.99■■□□□ 1.75
PHF1-209ENST00000487667 RBM19Q9Y4C8 960 aaKnown RBP25.99■■□□□ 1.75
PHF1-209ENST00000487667 KDM2BQ8NHM5 1336 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 AKAP4Q5JQC9 854 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 MRPL50Q8N5N7 158 aaKnown RBP25.98■■□□□ 1.75
PHF1-209ENST00000487667 TSPYL6Q8N831 410 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 LMO7Q8WWI1 1683 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 NHSL1Q5SYE7 1610 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 UBAP1LF5GYI3 381 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 LRRC59Q96AG4 307 aaKnown RBP25.98■■□□□ 1.75
PHF1-209ENST00000487667 COL18A1P39060 1754 aa25.98■■□□□ 1.75
PHF1-209ENST00000487667 OVOS2A0A0G2JMS6 1433 aa25.97■■□□□ 1.75
PHF1-209ENST00000487667 RGPD2P0DJD1 1756 aa25.97■■□□□ 1.75
PHF1-209ENST00000487667 ROBO1Q9Y6N7 1651 aa25.96■■□□□ 1.75
PHF1-209ENST00000487667 RLBP1P12271 317 aa25.96■■□□□ 1.75
PHF1-209ENST00000487667 CABLES1Q8TDN4 633 aa25.96■■□□□ 1.75
PHF1-209ENST00000487667 TAF7Q15545 349 aaPredicted RBP25.96■■□□□ 1.75
PHF1-209ENST00000487667 CERKQ8TCT0 537 aa25.96■■□□□ 1.75
PHF1-209ENST00000487667 CEMIPQ8WUJ3 1361 aa25.95■■□□□ 1.75
PHF1-209ENST00000487667 CHMP4AQ9BY43 222 aa25.95■■□□□ 1.74
PHF1-209ENST00000487667 API5Q9BZZ5 524 aaKnown RBP25.95■■□□□ 1.74
PHF1-209ENST00000487667 TCERG1O14776 1098 aaKnown RBP25.94■■□□□ 1.74
PHF1-209ENST00000487667 C1orf141Q5JVX7 400 aa25.94■■□□□ 1.74
PHF1-209ENST00000487667 RGPD5Q99666 1765 aa25.93■■□□□ 1.74
PHF1-209ENST00000487667 IL17REQ8NFR9 667 aa25.93■■□□□ 1.74
PHF1-209ENST00000487667 ELL2O00472 640 aaPredicted RBP25.92■■□□□ 1.74
PHF1-209ENST00000487667 ZNF530Q6P9A1 599 aaPredicted RBP25.92■■□□□ 1.74
PHF1-209ENST00000487667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.92■■□□□ 1.743e-6■■□□□ 13.2
PHF1-209ENST00000487667 RAPGEF4Q8WZA2 1011 aa25.92■■□□□ 1.74
PHF1-209ENST00000487667 CSB-PGBD3P0DP91 1061 aa25.9■■□□□ 1.74
PHF1-209ENST00000487667 NLRP2Q9NX02 1062 aa25.9■■□□□ 1.74
PHF1-209ENST00000487667 ITPRIPQ8IWB1 547 aa25.89■■□□□ 1.74
PHF1-209ENST00000487667 TNNQ9UQP3 1299 aa25.88■■□□□ 1.73
PHF1-209ENST00000487667 PTPRCP08575 1304 aa25.88■■□□□ 1.73
PHF1-209ENST00000487667 TATP17735 454 aaPredicted RBP25.88■■□□□ 1.73
PHF1-209ENST00000487667 RWDD1Q9H446 243 aaPredicted RBP25.87■■□□□ 1.73
PHF1-209ENST00000487667 PRDM11Q9NQV5 511 aa25.87■■□□□ 1.73
PHF1-209ENST00000487667 TMEM57Q8N5G2 664 aa25.86■■□□□ 1.73
PHF1-209ENST00000487667 SPG7Q9UQ90 795 aa25.86■■□□□ 1.73
PHF1-209ENST00000487667 AHDC1Q5TGY3 1603 aaPredicted RBP25.86■■□□□ 1.73
PHF1-209ENST00000487667 TEFQ10587 303 aa25.86■■□□□ 1.73
PHF1-209ENST00000487667 ABCC4O15439 1325 aa25.85■■□□□ 1.73
PHF1-209ENST00000487667 HOXB7P09629 217 aa25.84■■□□□ 1.73
PHF1-209ENST00000487667 MIS18AQ9NYP9 233 aa25.84■■□□□ 1.73
PHF1-209ENST00000487667 ABCA3Q99758 1704 aa25.83■■□□□ 1.73
PHF1-209ENST00000487667 CHRNA2Q15822 529 aa25.83■■□□□ 1.73
PHF1-209ENST00000487667 CCDC30Q5VVM6 783 aa25.83■■□□□ 1.73
PHF1-209ENST00000487667 STK31Q9BXU1 1019 aa25.83■■□□□ 1.73
PHF1-209ENST00000487667 RNMTO43148 476 aaKnown RBP25.82■■□□□ 1.72
PHF1-209ENST00000487667 WDR17Q8IZU2 1322 aa25.81■■□□□ 1.72
PHF1-209ENST00000487667 ZBTB40Q9NUA8 1239 aa25.81■■□□□ 1.72
PHF1-209ENST00000487667 ADAMTS7Q9UKP4 1686 aa25.8■■□□□ 1.72
PHF1-209ENST00000487667 KRT24Q2M2I5 525 aa25.8■■□□□ 1.72
PHF1-209ENST00000487667 CACNA1FO60840 1977 aa25.79■■□□□ 1.72
PHF1-209ENST00000487667 HSP90AB1P08238 724 aaKnown RBP25.78■■□□□ 1.72
PHF1-209ENST00000487667 LGR6Q9HBX8 967 aa25.78■■□□□ 1.72
PHF1-209ENST00000487667 PCDHB15Q9Y5E8 787 aa25.78■■□□□ 1.72
PHF1-209ENST00000487667 KDM3BQ7LBC6 1761 aa25.78■■□□□ 1.72
PHF1-209ENST00000487667 HDAC1Q13547 482 aaPredicted RBP25.78■■□□□ 1.72
PHF1-209ENST00000487667 PHLPP1O60346 1717 aa25.78■■□□□ 1.72
PHF1-209ENST00000487667 IGHDP01880 384 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms