RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
COL4A6-207ENST00000487645 RGS12O14924 1447 aa17.75■□□□□ 0.43
COL4A6-207ENST00000487645 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
COL4A6-207ENST00000487645 ZCRB1Q8TBF4 217 aaKnown RBP17.75■□□□□ 0.43
COL4A6-207ENST00000487645 PNNQ9H307 717 aaKnown RBP17.75■□□□□ 0.43
COL4A6-207ENST00000487645 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
COL4A6-207ENST00000487645 MEGF6O75095 1541 aa17.75■□□□□ 0.43
COL4A6-207ENST00000487645 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
COL4A6-207ENST00000487645 WDR43Q15061 677 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL4A6-207ENST00000487645 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
COL4A6-207ENST00000487645 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
COL4A6-207ENST00000487645 PKD1L3Q7Z443 1732 aa17.73■□□□□ 0.43
COL4A6-207ENST00000487645 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
COL4A6-207ENST00000487645 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
COL4A6-207ENST00000487645 KRT27Q7Z3Y8 459 aa17.73■□□□□ 0.43
COL4A6-207ENST00000487645 MIER1Q8N108 512 aa17.73■□□□□ 0.43
COL4A6-207ENST00000487645 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
COL4A6-207ENST00000487645 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
COL4A6-207ENST00000487645 TNS2Q63HR2 1409 aa17.72■□□□□ 0.43
COL4A6-207ENST00000487645 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
COL4A6-207ENST00000487645 SHANK3Q9BYB0 1731 aa17.71■□□□□ 0.43
COL4A6-207ENST00000487645 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
COL4A6-207ENST00000487645 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
COL4A6-207ENST00000487645 MARCH10Q8NA82 808 aaPredicted RBP17.69■□□□□ 0.42
COL4A6-207ENST00000487645 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
COL4A6-207ENST00000487645 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
COL4A6-207ENST00000487645 NEFMP07197 916 aa17.68■□□□□ 0.42
COL4A6-207ENST00000487645 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
COL4A6-207ENST00000487645 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
COL4A6-207ENST00000487645 IFNL2Q8IZJ0 200 aa17.67■□□□□ 0.42
COL4A6-207ENST00000487645 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
COL4A6-207ENST00000487645 CYP27B1O15528 508 aa17.66■□□□□ 0.42
COL4A6-207ENST00000487645 NKX1-1Q15270 411 aaPredicted RBP17.66■□□□□ 0.42
COL4A6-207ENST00000487645 FAM196AQ6ZSG2 479 aa17.66■□□□□ 0.42
COL4A6-207ENST00000487645 SBF2Q86WG5 1849 aa17.65■□□□□ 0.42
COL4A6-207ENST00000487645 BCL9O00512 1426 aa17.65■□□□□ 0.42
COL4A6-207ENST00000487645 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
COL4A6-207ENST00000487645 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
COL4A6-207ENST00000487645 ILDR2Q71H61 639 aa17.65■□□□□ 0.42
COL4A6-207ENST00000487645 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
COL4A6-207ENST00000487645 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
COL4A6-207ENST00000487645 EP400Q96L91 3159 aa17.65■□□□□ 0.42
COL4A6-207ENST00000487645 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.41
COL4A6-207ENST00000487645 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
COL4A6-207ENST00000487645 PHKG2P15735 406 aa17.64■□□□□ 0.41
COL4A6-207ENST00000487645 AKAP4Q5JQC9 854 aa17.64■□□□□ 0.41
COL4A6-207ENST00000487645 C1orf141Q5JVX7 400 aa17.64■□□□□ 0.41
COL4A6-207ENST00000487645 DLG5Q8TDM6 1919 aa17.63■□□□□ 0.41
COL4A6-207ENST00000487645 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
COL4A6-207ENST00000487645 FAM182BQ5T319 152 aa17.62■□□□□ 0.41
COL4A6-207ENST00000487645 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
COL4A6-207ENST00000487645 SCN11AQ9UI33 1791 aa17.61■□□□□ 0.41
COL4A6-207ENST00000487645 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
COL4A6-207ENST00000487645 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
COL4A6-207ENST00000487645 CCDC146Q8IYE0 955 aa17.6■□□□□ 0.41
COL4A6-207ENST00000487645 DCAF5Q96JK2 942 aa17.6■□□□□ 0.41
COL4A6-207ENST00000487645 ITGB4P16144 1822 aa17.59■□□□□ 0.41
COL4A6-207ENST00000487645 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
COL4A6-207ENST00000487645 TMPOP42166 694 aaKnown RBP17.58■□□□□ 0.4
COL4A6-207ENST00000487645 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
COL4A6-207ENST00000487645 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
COL4A6-207ENST00000487645 CCDC125Q86Z20 511 aa17.57■□□□□ 0.4
COL4A6-207ENST00000487645 DOT1LQ8TEK3 1739 aa17.56■□□□□ 0.4
COL4A6-207ENST00000487645 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
COL4A6-207ENST00000487645 MPRIPQ6WCQ1 1025 aa17.56■□□□□ 0.4
COL4A6-207ENST00000487645 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
COL4A6-207ENST00000487645 NHSQ6T4R5 1651 aa17.55■□□□□ 0.4
COL4A6-207ENST00000487645 APAF1O14727 1248 aa17.55■□□□□ 0.4
COL4A6-207ENST00000487645 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
COL4A6-207ENST00000487645 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
COL4A6-207ENST00000487645 RIPK4P57078 832 aa17.55■□□□□ 0.4
COL4A6-207ENST00000487645 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
COL4A6-207ENST00000487645 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
COL4A6-207ENST00000487645 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
COL4A6-207ENST00000487645 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
COL4A6-207ENST00000487645 TRIM37O94972 964 aa17.54■□□□□ 0.4
COL4A6-207ENST00000487645 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
COL4A6-207ENST00000487645 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
COL4A6-207ENST00000487645 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
COL4A6-207ENST00000487645 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
COL4A6-207ENST00000487645 KCNQ2O43526 872 aa17.53■□□□□ 0.4
COL4A6-207ENST00000487645 CABP4P57796 275 aa17.52■□□□□ 0.4
COL4A6-207ENST00000487645 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
COL4A6-207ENST00000487645 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.39
COL4A6-207ENST00000487645 BTAF1O14981 1849 aa17.51■□□□□ 0.39
COL4A6-207ENST00000487645 NEUROD2Q15784 382 aa17.51■□□□□ 0.39
COL4A6-207ENST00000487645 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
COL4A6-207ENST00000487645 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
COL4A6-207ENST00000487645 TNS1Q9HBL0 1735 aaKnown RBP17.5■□□□□ 0.39
COL4A6-207ENST00000487645 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
COL4A6-207ENST00000487645 MCM10Q7L590 875 aa17.5■□□□□ 0.39
COL4A6-207ENST00000487645 NFATC2IPQ8NCF5 419 aa17.5■□□□□ 0.39
COL4A6-207ENST00000487645 PIGBQ92521 554 aa17.5■□□□□ 0.39
COL4A6-207ENST00000487645 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL4A6-207ENST00000487645 SLC52A2Q9HAB3 445 aa17.5■□□□□ 0.39
COL4A6-207ENST00000487645 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
COL4A6-207ENST00000487645 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
COL4A6-207ENST00000487645 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
COL4A6-207ENST00000487645 TEFQ10587 303 aa17.49■□□□□ 0.39
COL4A6-207ENST00000487645 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms