RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 RNF123Q5XPI4 1314 aa9.34□□□□□ -0.91
CCNB3-206ENST00000487204 UBAP1LF5GYI3 381 aa9.34□□□□□ -0.91
CCNB3-206ENST00000487204 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
CCNB3-206ENST00000487204 NBPF6Q5VWK0 638 aa9.34□□□□□ -0.91
CCNB3-206ENST00000487204 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
CCNB3-206ENST00000487204 NBPF4Q96M43 638 aa9.34□□□□□ -0.91
CCNB3-206ENST00000487204 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.92
CCNB3-206ENST00000487204 FAM208AQ9UK61 1670 aaKnown RBP9.33□□□□□ -0.92
CCNB3-206ENST00000487204 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
CCNB3-206ENST00000487204 CERKQ8TCT0 537 aa9.33□□□□□ -0.92
CCNB3-206ENST00000487204 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
CCNB3-206ENST00000487204 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
CCNB3-206ENST00000487204 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
CCNB3-206ENST00000487204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCNB3-206ENST00000487204 AXIN2Q9Y2T1 843 aa9.33□□□□□ -0.92
CCNB3-206ENST00000487204 COL22A1Q8NFW1 1626 aaPredicted RBP9.32□□□□□ -0.92
CCNB3-206ENST00000487204 PLEKHG5O94827 1062 aa9.32□□□□□ -0.92
CCNB3-206ENST00000487204 MTHFSDQ2M296 383 aaKnown RBP9.32□□□□□ -0.92
CCNB3-206ENST00000487204 NLRP2Q9NX02 1062 aa9.32□□□□□ -0.92
CCNB3-206ENST00000487204 CAMTA1Q9Y6Y1 1673 aa9.32□□□□□ -0.92
CCNB3-206ENST00000487204 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 ZNF853P0CG23 659 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
CCNB3-206ENST00000487204 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
CCNB3-206ENST00000487204 EVA1CP58658 441 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 PIP4K2BP78356 416 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 FKBP8Q14318 412 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 AKAP4Q5JQC9 854 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
CCNB3-206ENST00000487204 CHMP4AQ9BY43 222 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 MAP3K5Q99683 1374 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 COL18A1P39060 1754 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
CCNB3-206ENST00000487204 MS4A1P11836 297 aa9.3□□□□□ -0.92
CCNB3-206ENST00000487204 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
CCNB3-206ENST00000487204 PHLPP1O60346 1717 aa9.3□□□□□ -0.92
CCNB3-206ENST00000487204 OVOS2A0A0G2JMS6 1433 aa9.3□□□□□ -0.92
CCNB3-206ENST00000487204 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
CCNB3-206ENST00000487204 LMO7Q8WWI1 1683 aa9.29□□□□□ -0.92
CCNB3-206ENST00000487204 ABCA3Q99758 1704 aa9.29□□□□□ -0.92
CCNB3-206ENST00000487204 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
CCNB3-206ENST00000487204 TOM1L2Q6ZVM7 507 aa9.29□□□□□ -0.92
CCNB3-206ENST00000487204 USHBP1Q8N6Y0 703 aa9.29□□□□□ -0.92
CCNB3-206ENST00000487204 CARD10Q9BWT7 1032 aa9.29□□□□□ -0.92
CCNB3-206ENST00000487204 COL16A1Q07092 1604 aaPredicted RBP9.29□□□□□ -0.92
CCNB3-206ENST00000487204 COL5A2P05997 1499 aaPredicted RBP9.28□□□□□ -0.92
CCNB3-206ENST00000487204 JCADQ9P266 1359 aa9.28□□□□□ -0.92
CCNB3-206ENST00000487204 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
CCNB3-206ENST00000487204 CHL1O00533 1208 aa9.28□□□□□ -0.92
CCNB3-206ENST00000487204 ALDH1L2Q3SY69 923 aa9.28□□□□□ -0.92
CCNB3-206ENST00000487204 ZNF530Q6P9A1 599 aaPredicted RBP9.28□□□□□ -0.92
CCNB3-206ENST00000487204 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
CCNB3-206ENST00000487204 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.92
CCNB3-206ENST00000487204 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
CCNB3-206ENST00000487204 EXOSC9Q06265 439 aaKnown RBP9.27□□□□□ -0.93
CCNB3-206ENST00000487204 TAF7Q15545 349 aaPredicted RBP9.27□□□□□ -0.93
CCNB3-206ENST00000487204 MCM10Q7L590 875 aa9.27□□□□□ -0.93
CCNB3-206ENST00000487204 MBIPQ9NS73 344 aa9.27□□□□□ -0.93
CCNB3-206ENST00000487204 CRB1P82279 1406 aa9.27□□□□□ -0.93
CCNB3-206ENST00000487204 SPATA31A6Q5VVP1 1343 aa9.27□□□□□ -0.93
CCNB3-206ENST00000487204 CEMIPQ8WUJ3 1361 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 CANXP27824 592 aaKnown RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 TEFQ10587 303 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 AAMPQ13685 434 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 PDE3AQ14432 1141 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 IFNL2Q8IZJ0 200 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 PELP1Q8IZL8 1130 aaKnown RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 TSR2Q969E8 191 aaKnown RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 THUMPD2Q9BTF0 503 aaKnown RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
CCNB3-206ENST00000487204 BTG4Q9NY30 223 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 DLG5Q8TDM6 1919 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 KIF16BQ96L93 1317 aa9.26□□□□□ -0.93
CCNB3-206ENST00000487204 IL2RBP14784 551 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 STRN4Q9NRL3 753 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 THRAP3Q9Y2W1 955 aaKnown RBP9.25□□□□□ -0.93
CCNB3-206ENST00000487204 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
CCNB3-206ENST00000487204 RGPD5Q99666 1765 aa9.24□□□□□ -0.93
CCNB3-206ENST00000487204 RNMTO43148 476 aaKnown RBP9.24□□□□□ -0.93
CCNB3-206ENST00000487204 TWISTNBQ3B726 338 aaPredicted RBP9.24□□□□□ -0.93
CCNB3-206ENST00000487204 IL17REQ8NFR9 667 aa9.24□□□□□ -0.93
CCNB3-206ENST00000487204 ZCRB1Q8TBF4 217 aaKnown RBP9.24□□□□□ -0.93
CCNB3-206ENST00000487204 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
CCNB3-206ENST00000487204 LRRC37A3O60309 1634 aa9.23□□□□□ -0.93
CCNB3-206ENST00000487204 VAMP4O75379 141 aa9.23□□□□□ -0.93
CCNB3-206ENST00000487204 HOXB7P09629 217 aa9.23□□□□□ -0.93
CCNB3-206ENST00000487204 PHKG2P15735 406 aa9.23□□□□□ -0.93
CCNB3-206ENST00000487204 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
CCNB3-206ENST00000487204 ARHGAP45Q92619 1136 aa9.23□□□□□ -0.93
CCNB3-206ENST00000487204 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
CCNB3-206ENST00000487204 SMC4Q9NTJ3 1288 aa9.23□□□□□ -0.93
CCNB3-206ENST00000487204 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms