RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 NHSQ6T4R5 1651 aa13.92□□□□□ -0.18
NEK4-204ENST00000487068 HSP90AB2PQ58FF8 381 aa13.92□□□□□ -0.18
NEK4-204ENST00000487068 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
NEK4-204ENST00000487068 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
NEK4-204ENST00000487068 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
NEK4-204ENST00000487068 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
NEK4-204ENST00000487068 BTAF1O14981 1849 aa13.91□□□□□ -0.18
NEK4-204ENST00000487068 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
NEK4-204ENST00000487068 EXOC5O00471 708 aa13.9□□□□□ -0.18
NEK4-204ENST00000487068 YY1P25490 414 aa13.9□□□□□ -0.18
NEK4-204ENST00000487068 NBPF14Q5TI25 921 aa13.9□□□□□ -0.18
NEK4-204ENST00000487068 RGPD3A6NKT7 1758 aaPredicted RBP13.9□□□□□ -0.18
NEK4-204ENST00000487068 RGPD4Q7Z3J3 1758 aa13.9□□□□□ -0.18
NEK4-204ENST00000487068 MEGF6O75095 1541 aa13.9□□□□□ -0.19
NEK4-204ENST00000487068 POLKQ9UBT6 870 aa13.89□□□□□ -0.19
NEK4-204ENST00000487068 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
NEK4-204ENST00000487068 RAPGEF4Q8WZA2 1011 aa13.88□□□□□ -0.19
NEK4-204ENST00000487068 ITGB4P16144 1822 aa13.87□□□□□ -0.19
NEK4-204ENST00000487068 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
NEK4-204ENST00000487068 NBPF6Q5VWK0 638 aa13.86□□□□□ -0.19
NEK4-204ENST00000487068 NBPF4Q96M43 638 aa13.86□□□□□ -0.19
NEK4-204ENST00000487068 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
NEK4-204ENST00000487068 TATP17735 454 aaPredicted RBP13.85□□□□□ -0.19
NEK4-204ENST00000487068 MARCH10Q8NA82 808 aaPredicted RBP13.85□□□□□ -0.19
NEK4-204ENST00000487068 DDX54Q8TDD1 881 aaKnown RBP13.85□□□□□ -0.19
NEK4-204ENST00000487068 SPON1Q9HCB6 807 aa13.85□□□□□ -0.19
NEK4-204ENST00000487068 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
NEK4-204ENST00000487068 PER1O15534 1290 aaPredicted RBP13.84□□□□□ -0.19
NEK4-204ENST00000487068 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
NEK4-204ENST00000487068 TOGARAM1Q9Y4F4 1720 aa13.84□□□□□ -0.19
NEK4-204ENST00000487068 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.19
NEK4-204ENST00000487068 KCNQ2O43526 872 aa13.83□□□□□ -0.2
NEK4-204ENST00000487068 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
NEK4-204ENST00000487068 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
NEK4-204ENST00000487068 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
NEK4-204ENST00000487068 EYA1Q99502 592 aa13.81□□□□□ -0.2
NEK4-204ENST00000487068 PCDH11XQ9BZA7 1347 aa13.81□□□□□ -0.2
NEK4-204ENST00000487068 PCDH11YQ9BZA8 1340 aa13.81□□□□□ -0.2
NEK4-204ENST00000487068 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
NEK4-204ENST00000487068 MTHFSP49914 203 aa13.8□□□□□ -0.2
NEK4-204ENST00000487068 SYTL4Q96C24 671 aaPredicted RBP13.8□□□□□ -0.2
NEK4-204ENST00000487068 BCL9O00512 1426 aa13.8□□□□□ -0.2
NEK4-204ENST00000487068 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
NEK4-204ENST00000487068 LY75O60449 1722 aa13.78□□□□□ -0.2
NEK4-204ENST00000487068 CASZ1Q86V15 1759 aa13.78□□□□□ -0.2
NEK4-204ENST00000487068 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
NEK4-204ENST00000487068 SCN11AQ9UI33 1791 aa13.78□□□□□ -0.2
NEK4-204ENST00000487068 PLSCR1O15162 318 aa13.77□□□□□ -0.21
NEK4-204ENST00000487068 DDX10Q13206 875 aaKnown RBP13.77□□□□□ -0.21
NEK4-204ENST00000487068 CFAP53Q96M91 514 aa13.77□□□□□ -0.21
NEK4-204ENST00000487068 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
NEK4-204ENST00000487068 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
NEK4-204ENST00000487068 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
NEK4-204ENST00000487068 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
NEK4-204ENST00000487068 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
NEK4-204ENST00000487068 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
NEK4-204ENST00000487068 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
NEK4-204ENST00000487068 TAF1LQ8IZX4 1826 aa13.75□□□□□ -0.21
NEK4-204ENST00000487068 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
NEK4-204ENST00000487068 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
NEK4-204ENST00000487068 C5P01031 1676 aa13.74□□□□□ -0.21
NEK4-204ENST00000487068 HMOX1P09601 288 aa13.73□□□□□ -0.21
NEK4-204ENST00000487068 IL13P35225 146 aa13.73□□□□□ -0.21
NEK4-204ENST00000487068 CYP27B1O15528 508 aa13.72□□□□□ -0.21
NEK4-204ENST00000487068 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
NEK4-204ENST00000487068 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
NEK4-204ENST00000487068 ZNF530Q6P9A1 599 aaPredicted RBP13.72□□□□□ -0.21
NEK4-204ENST00000487068 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
NEK4-204ENST00000487068 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.21
NEK4-204ENST00000487068 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.21
NEK4-204ENST00000487068 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
NEK4-204ENST00000487068 IFNL2Q8IZJ0 200 aa13.71□□□□□ -0.21
NEK4-204ENST00000487068 KDRP35968 1356 aa13.71□□□□□ -0.22
NEK4-204ENST00000487068 ZBTB7AO95365 584 aa13.7□□□□□ -0.22
NEK4-204ENST00000487068 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
NEK4-204ENST00000487068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■■■□ 24.3
NEK4-204ENST00000487068 PAPPAQ13219 1627 aa13.7□□□□□ -0.22
NEK4-204ENST00000487068 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
NEK4-204ENST00000487068 PHKG2P15735 406 aa13.69□□□□□ -0.22
NEK4-204ENST00000487068 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
NEK4-204ENST00000487068 AMOTQ4VCS5 1084 aa13.69□□□□□ -0.22
NEK4-204ENST00000487068 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
NEK4-204ENST00000487068 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
NEK4-204ENST00000487068 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
NEK4-204ENST00000487068 PTGER2P43116 358 aa13.68□□□□□ -0.22
NEK4-204ENST00000487068 PROM2Q8N271 834 aa13.68□□□□□ -0.22
NEK4-204ENST00000487068 CHD4Q14839 1912 aa13.68□□□□□ -0.22
NEK4-204ENST00000487068 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
NEK4-204ENST00000487068 ZNF784Q8NCA9 323 aaPredicted RBP13.67□□□□□ -0.22
NEK4-204ENST00000487068 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
NEK4-204ENST00000487068 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
NEK4-204ENST00000487068 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
NEK4-204ENST00000487068 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
NEK4-204ENST00000487068 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
NEK4-204ENST00000487068 FHDC1Q9C0D6 1143 aaPredicted RBP13.66□□□□□ -0.22
NEK4-204ENST00000487068 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
NEK4-204ENST00000487068 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
NEK4-204ENST00000487068 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
NEK4-204ENST00000487068 RALBP1Q15311 655 aa13.65□□□□□ -0.22
NEK4-204ENST00000487068 SYT17Q9BSW7 474 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms