RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
SNRNP27-204ENST00000487029 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNRNP27-204ENST00000487029 CYLDQ9NQC7 956 aa8.35□□□□□ -1.07
SNRNP27-204ENST00000487029 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
SNRNP27-204ENST00000487029 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
SNRNP27-204ENST00000487029 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
SNRNP27-204ENST00000487029 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
SNRNP27-204ENST00000487029 IGF1RP08069 1367 aa8.34□□□□□ -1.07
SNRNP27-204ENST00000487029 AP1G2O75843 785 aa8.33□□□□□ -1.08
SNRNP27-204ENST00000487029 DZIP3Q86Y13 1208 aaKnown RBP8.33□□□□□ -1.08
SNRNP27-204ENST00000487029 TRIM22Q8IYM9 498 aa8.33□□□□□ -1.08
SNRNP27-204ENST00000487029 SPOCK3Q9BQ16 436 aa8.33□□□□□ -1.08
SNRNP27-204ENST00000487029 MSTNO14793 375 aa8.32□□□□□ -1.08
SNRNP27-204ENST00000487029 ADAM23O75077 832 aa8.32□□□□□ -1.08
SNRNP27-204ENST00000487029 ACDQ96AP0 544 aa8.32□□□□□ -1.08
SNRNP27-204ENST00000487029 PROCP04070 461 aa8.31□□□□□ -1.08
SNRNP27-204ENST00000487029 ENAMQ9NRM1 1142 aa8.31□□□□□ -1.08
SNRNP27-204ENST00000487029 BCRP11274 1271 aa8.3□□□□□ -1.08
SNRNP27-204ENST00000487029 RIPOR1Q6ZS17 1223 aa8.3□□□□□ -1.08
SNRNP27-204ENST00000487029 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
SNRNP27-204ENST00000487029 GTPBP3Q969Y2 492 aaKnown RBP8.29□□□□□ -1.08
SNRNP27-204ENST00000487029 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 MEN1O00255 615 aa8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 USP17L8P0C7I0 530 aa8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 POU4F2Q12837 409 aa8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
SNRNP27-204ENST00000487029 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
SNRNP27-204ENST00000487029 PHF20L1A8MW92 1017 aa8.27□□□□□ -1.09
SNRNP27-204ENST00000487029 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
SNRNP27-204ENST00000487029 GMCL1Q96IK5 515 aa8.27□□□□□ -1.09
SNRNP27-204ENST00000487029 GAS2L1Q99501 681 aaPredicted RBP8.27□□□□□ -1.09
SNRNP27-204ENST00000487029 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
SNRNP27-204ENST00000487029 BCANQ96GW7 911 aa8.26□□□□□ -1.09
SNRNP27-204ENST00000487029 TRIM34Q9BYJ4 488 aa8.26□□□□□ -1.09
SNRNP27-204ENST00000487029 ATP1B4Q9UN42 357 aaPredicted RBP8.26□□□□□ -1.09
SNRNP27-204ENST00000487029 DYRK1BQ9Y463 629 aa8.26□□□□□ -1.09
SNRNP27-204ENST00000487029 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
SNRNP27-204ENST00000487029 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
SNRNP27-204ENST00000487029 THBS1P07996 1170 aa8.24□□□□□ -1.09
SNRNP27-204ENST00000487029 GPC1P35052 558 aa8.24□□□□□ -1.09
SNRNP27-204ENST00000487029 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
SNRNP27-204ENST00000487029 GRIP2Q9C0E4 1043 aa8.24□□□□□ -1.09
SNRNP27-204ENST00000487029 NBPF10Q6P3W6 841 aaKnown RBP8.23□□□□□ -1.09
SNRNP27-204ENST00000487029 PODNQ7Z5L7 613 aa8.23□□□□□ -1.09
SNRNP27-204ENST00000487029 NBPF15Q8N660 670 aa8.23□□□□□ -1.09
SNRNP27-204ENST00000487029 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
SNRNP27-204ENST00000487029 OIP5O43482 229 aa8.22□□□□□ -1.09
SNRNP27-204ENST00000487029 MX2P20592 715 aa8.22□□□□□ -1.09
SNRNP27-204ENST00000487029 SCTRP47872 440 aa8.22□□□□□ -1.09
SNRNP27-204ENST00000487029 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
SNRNP27-204ENST00000487029 PNMA1Q8ND90 353 aa8.22□□□□□ -1.09
SNRNP27-204ENST00000487029 KRBA1A5PL33 1030 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 SHISA8B8ZZ34 492 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 H7C1W4 665 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 RFC5P40937 340 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 SLC27A3Q5K4L6 730 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 PCDHB9Q9Y5E1 797 aa8.21□□□□□ -1.1
SNRNP27-204ENST00000487029 GALNT6Q8NCL4 622 aa8.2□□□□□ -1.1
SNRNP27-204ENST00000487029 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
SNRNP27-204ENST00000487029 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
SNRNP27-204ENST00000487029 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 SPATA31C2B4DYI2 1134 aa8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 COL8A1P27658 744 aa8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 CLN3Q13286 438 aa8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 CC2D2BQ6DHV5 1058 aa8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
SNRNP27-204ENST00000487029 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
SNRNP27-204ENST00000487029 NLRP3Q96P20 1036 aa8.18□□□□□ -1.1
SNRNP27-204ENST00000487029 OXCT2Q9BYC2 517 aaPredicted RBP8.18□□□□□ -1.1
SNRNP27-204ENST00000487029 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
SNRNP27-204ENST00000487029 K7ELQ4 463 aaPredicted RBP8.17□□□□□ -1.1
SNRNP27-204ENST00000487029 F11P03951 625 aa8.17□□□□□ -1.1
SNRNP27-204ENST00000487029 BAG6P46379 1132 aa8.17□□□□□ -1.1
SNRNP27-204ENST00000487029 OSBPL3Q9H4L5 887 aa8.17□□□□□ -1.1
SNRNP27-204ENST00000487029 ARHGEF10LQ9HCE6 1279 aa8.17□□□□□ -1.1
SNRNP27-204ENST00000487029 TRAK2O60296 914 aa8.16□□□□□ -1.1
SNRNP27-204ENST00000487029 KLRG1Q96E93 195 aa8.16□□□□□ -1.1
SNRNP27-204ENST00000487029 GJD4Q96KN9 370 aaPredicted RBP8.16□□□□□ -1.1
SNRNP27-204ENST00000487029 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
SNRNP27-204ENST00000487029 RAB6BQ9NRW1 208 aa8.16□□□□□ -1.1
SNRNP27-204ENST00000487029 WASLO00401 505 aaPredicted RBP8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 FURINP09958 794 aa8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 HOXB4P17483 251 aaPredicted RBP8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 UBAP2LQ14157 1087 aaKnown RBP8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 TAS1R3Q7RTX0 852 aa8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 GPAMQ9HCL2 828 aa8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 NSFL1CQ9UNZ2 370 aaKnown RBP8.15□□□□□ -1.1
SNRNP27-204ENST00000487029 PHKA2P46019 1235 aa8.13□□□□□ -1.11
SNRNP27-204ENST00000487029 MAP2K3P46734 347 aa8.13□□□□□ -1.11
SNRNP27-204ENST00000487029 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
SNRNP27-204ENST00000487029 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
SNRNP27-204ENST00000487029 SUV39H2Q9H5I1 410 aa8.13□□□□□ -1.11
SNRNP27-204ENST00000487029 C2CD2LO14523 706 aa8.12□□□□□ -1.11
SNRNP27-204ENST00000487029 IL2RAP01589 272 aa8.12□□□□□ -1.11
SNRNP27-204ENST00000487029 Q8N3U1 123 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms