RNA–Protein interactions for RNA: ENST00000486878.2

SCN2A-206, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-206ENST00000486878 MAN1A2O60476 641 aa12.7□□□□□ -0.38
SCN2A-206ENST00000486878 OSBPL3Q9H4L5 887 aa12.7□□□□□ -0.38
SCN2A-206ENST00000486878 LZTS3O60299 673 aaPredicted RBP12.69□□□□□ -0.38
SCN2A-206ENST00000486878 PLPP7Q8NBV4 271 aa12.69□□□□□ -0.38
SCN2A-206ENST00000486878 CDCA7Q9BWT1 371 aaPredicted RBP12.69□□□□□ -0.38
SCN2A-206ENST00000486878 HDGFL1Q5TGJ6 251 aa12.68□□□□□ -0.38
SCN2A-206ENST00000486878 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
SCN2A-206ENST00000486878 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
SCN2A-206ENST00000486878 GNRH1P01148 92 aa12.67□□□□□ -0.38
SCN2A-206ENST00000486878 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.67□□□□□ -0.38
SCN2A-206ENST00000486878 TSGA10IPQ3SY00 556 aa12.67□□□□□ -0.38
SCN2A-206ENST00000486878 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
SCN2A-206ENST00000486878 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
SCN2A-206ENST00000486878 NPAS3Q8IXF0 933 aa12.66□□□□□ -0.38
SCN2A-206ENST00000486878 DNMT3LQ9UJW3 386 aa12.66□□□□□ -0.38
SCN2A-206ENST00000486878 GPC1P35052 558 aa12.65□□□□□ -0.38
SCN2A-206ENST00000486878 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
SCN2A-206ENST00000486878 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
SCN2A-206ENST00000486878 RNF144AP50876 292 aaPredicted RBP12.64□□□□□ -0.39
SCN2A-206ENST00000486878 CLN3Q13286 438 aa12.64□□□□□ -0.39
SCN2A-206ENST00000486878 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
SCN2A-206ENST00000486878 A0A1W2PRU2 124 aa12.63□□□□□ -0.39
SCN2A-206ENST00000486878 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
SCN2A-206ENST00000486878 SKIP12755 728 aa12.63□□□□□ -0.39
SCN2A-206ENST00000486878 NXF1Q9UBU9 619 aaKnown RBP12.63□□□□□ -0.39
SCN2A-206ENST00000486878 RNF217Q8TC41 542 aa12.62□□□□□ -0.39
SCN2A-206ENST00000486878 GLMNQ92990 594 aa12.62□□□□□ -0.39
SCN2A-206ENST00000486878 EML3Q32P44 896 aa12.61□□□□□ -0.39
SCN2A-206ENST00000486878 NLRP3Q96P20 1036 aa12.61□□□□□ -0.39
SCN2A-206ENST00000486878 SOBPA7XYQ1 873 aa12.6□□□□□ -0.39
SCN2A-206ENST00000486878 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
SCN2A-206ENST00000486878 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
SCN2A-206ENST00000486878 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
SCN2A-206ENST00000486878 MEN1O00255 615 aa12.59□□□□□ -0.39
SCN2A-206ENST00000486878 PLEKHM2Q8IWE5 1019 aa12.59□□□□□ -0.39
SCN2A-206ENST00000486878 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
SCN2A-206ENST00000486878 FIGNL2A6NMB9 653 aa12.58□□□□□ -0.4
SCN2A-206ENST00000486878 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
SCN2A-206ENST00000486878 CALR3Q96L12 384 aaKnown RBP12.58□□□□□ -0.4
SCN2A-206ENST00000486878 UCN2Q96RP3 112 aa12.58□□□□□ -0.4
SCN2A-206ENST00000486878 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
SCN2A-206ENST00000486878 ZMYND15Q9H091 742 aa12.58□□□□□ -0.4
SCN2A-206ENST00000486878 NOD1Q9Y239 953 aa12.58□□□□□ -0.4
SCN2A-206ENST00000486878 ATP9BO43861 1147 aa12.57□□□□□ -0.4
SCN2A-206ENST00000486878 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
SCN2A-206ENST00000486878 LYSMD3Q7Z3D4 306 aa12.57□□□□□ -0.4
SCN2A-206ENST00000486878 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
SCN2A-206ENST00000486878 XAGE2Q96GT9 111 aa12.57□□□□□ -0.4
SCN2A-206ENST00000486878 NFX1Q12986 1120 aaKnown RBP12.56□□□□□ -0.4
SCN2A-206ENST00000486878 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
SCN2A-206ENST00000486878 NCOA4Q13772 614 aa12.55□□□□□ -0.4
SCN2A-206ENST00000486878 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
SCN2A-206ENST00000486878 H3BM21 787 aa12.54□□□□□ -0.4
SCN2A-206ENST00000486878 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
SCN2A-206ENST00000486878 WFS1O76024 890 aa12.54□□□□□ -0.4
SCN2A-206ENST00000486878 IL2RAP01589 272 aa12.54□□□□□ -0.4
SCN2A-206ENST00000486878 PTSQ03393 145 aa12.54□□□□□ -0.4
SCN2A-206ENST00000486878 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
SCN2A-206ENST00000486878 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
SCN2A-206ENST00000486878 USP17L3A6NCW0 530 aa12.53□□□□□ -0.4
SCN2A-206ENST00000486878 USP17L4A6NCW7 530 aa12.53□□□□□ -0.4
SCN2A-206ENST00000486878 SLC27A3Q5K4L6 730 aa12.53□□□□□ -0.4
SCN2A-206ENST00000486878 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
SCN2A-206ENST00000486878 USP17L1Q7RTZ2 530 aa12.53□□□□□ -0.4
SCN2A-206ENST00000486878 TRIM50Q86XT4 487 aa12.53□□□□□ -0.4
SCN2A-206ENST00000486878 WDR44Q5JSH3 913 aa12.52□□□□□ -0.41
SCN2A-206ENST00000486878 RAB6BQ9NRW1 208 aa12.52□□□□□ -0.41
SCN2A-206ENST00000486878 PCDHGA11Q9Y5H2 935 aa12.52□□□□□ -0.41
SCN2A-206ENST00000486878 CENPCQ03188 943 aa12.51□□□□□ -0.41
SCN2A-206ENST00000486878 LCE2AQ5TA79 106 aaPredicted RBP12.51□□□□□ -0.41
SCN2A-206ENST00000486878 ETNK1Q9HBU6 452 aa12.51□□□□□ -0.41
SCN2A-206ENST00000486878 SLC35F4A4IF30 521 aa12.5□□□□□ -0.41
SCN2A-206ENST00000486878 SPATA31C2B4DYI2 1134 aa12.5□□□□□ -0.41
SCN2A-206ENST00000486878 PPFIA3O75145 1194 aa12.5□□□□□ -0.41
SCN2A-206ENST00000486878 INHAP05111 366 aa12.5□□□□□ -0.41
SCN2A-206ENST00000486878 GTF2IP78347 998 aa12.5□□□□□ -0.41
SCN2A-206ENST00000486878 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
SCN2A-206ENST00000486878 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
SCN2A-206ENST00000486878 ATP1A2P50993 1020 aa12.49□□□□□ -0.41
SCN2A-206ENST00000486878 SCNN1DP51172 638 aa12.49□□□□□ -0.41
SCN2A-206ENST00000486878 GDF10P55107 478 aa12.49□□□□□ -0.41
SCN2A-206ENST00000486878 PRICKLE2Q7Z3G6 844 aa12.49□□□□□ -0.41
SCN2A-206ENST00000486878 IRF7Q92985 503 aa12.49□□□□□ -0.41
SCN2A-206ENST00000486878 PPP1R12CQ9BZL4 782 aa12.49□□□□□ -0.41
SCN2A-206ENST00000486878 TFIP11Q9UBB9 837 aaKnown RBP12.49□□□□□ -0.41
SCN2A-206ENST00000486878 PALM3A6NDB9 673 aaPredicted RBP12.48□□□□□ -0.41
SCN2A-206ENST00000486878 GTF2E1P29083 439 aaPredicted RBP12.48□□□□□ -0.41
SCN2A-206ENST00000486878 CCDC155Q8N6L0 562 aa12.48□□□□□ -0.41
SCN2A-206ENST00000486878 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
SCN2A-206ENST00000486878 MAFBQ9Y5Q3 323 aaPredicted RBP12.48□□□□□ -0.41
SCN2A-206ENST00000486878 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
SCN2A-206ENST00000486878 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
SCN2A-206ENST00000486878 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
SCN2A-206ENST00000486878 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
SCN2A-206ENST00000486878 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
SCN2A-206ENST00000486878 TAS1R3Q7RTX0 852 aa12.45□□□□□ -0.42
SCN2A-206ENST00000486878 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
SCN2A-206ENST00000486878 TMEM229AB2RXF0 380 aa12.44□□□□□ -0.42
SCN2A-206ENST00000486878 BACH1O14867 736 aa12.44□□□□□ -0.42
SCN2A-206ENST00000486878 PSME1Q06323 249 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms