RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	RNF123	Q5XPI4	1314 aa		11.75	□□□□□ -0.53
KIFC1-213	ENST00000486695	CPD	O75976	1380 aa		11.75	□□□□□ -0.53
KIFC1-213	ENST00000486695	ABCC6	O95255	1503 aa		11.75	□□□□□ -0.53
KIFC1-213	ENST00000486695	NBPF6	Q5VWK0	638 aa		11.74	□□□□□ -0.53
KIFC1-213	ENST00000486695	RTF1	Q92541	710 aa	Known RBP	11.74	□□□□□ -0.53
KIFC1-213	ENST00000486695	NBPF4	Q96M43	638 aa		11.74	□□□□□ -0.53
KIFC1-213	ENST00000486695	C8orf37	Q96NL8	207 aa		11.74	□□□□□ -0.53
KIFC1-213	ENST00000486695	RGPD5	Q99666	1765 aa		11.74	□□□□□ -0.53
KIFC1-213	ENST00000486695	CSB-PGBD3	P0DP91	1061 aa		11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	RRP1	P56182	461 aa	Known RBP	11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	GNAI1	P63096	354 aa		11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	MTHFSD	Q2M296	383 aa	Known RBP	11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	USHBP1	Q8N6Y0	703 aa		11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	KIAA0232	Q92628	1395 aa		11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	PRDM11	Q9NQV5	511 aa		11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	AXIN2	Q9Y2T1	843 aa		11.73	□□□□□ -0.53
KIFC1-213	ENST00000486695	RGPD2	P0DJD1	1756 aa		11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	COL18A1	P39060	1754 aa		11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	HTATSF1	O43719	755 aa	Known RBP	11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	RBM6	P78332	1123 aa	Known RBP	11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	IRX6	P78412	446 aa	Predicted RBP	11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	CHRNA2	Q15822	529 aa		11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	IFT57	Q9NWB7	429 aa		11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	LAS1L	Q9Y4W2	734 aa	Known RBP	11.72	□□□□□ -0.53
KIFC1-213	ENST00000486695	ERBB3	P21860	1342 aa		11.71	□□□□□ -0.53
KIFC1-213	ENST00000486695	FANCI	Q9NVI1	1328 aa		11.71	□□□□□ -0.53
KIFC1-213	ENST00000486695	CT47B1	P0C2W7	299 aa	Predicted RBP	11.71	□□□□□ -0.53
KIFC1-213	ENST00000486695	AMOT	Q4VCS5	1084 aa		11.71	□□□□□ -0.53
KIFC1-213	ENST00000486695	NGLY1	Q96IV0	654 aa		11.71	□□□□□ -0.53
KIFC1-213	ENST00000486695	NLRP2	Q9NX02	1062 aa		11.71	□□□□□ -0.53
KIFC1-213	ENST00000486695	FAM208A	Q9UK61	1670 aa	Known RBP	11.71	□□□□□ -0.54
KIFC1-213	ENST00000486695	ABCA3	Q99758	1704 aa		11.7	□□□□□ -0.54
KIFC1-213	ENST00000486695	GNAT3	A8MTJ3	354 aa		11.7	□□□□□ -0.54
KIFC1-213	ENST00000486695	ADAMTS2	O95450	1211 aa		11.7	□□□□□ -0.54
KIFC1-213	ENST00000486695	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.7	□□□□□ -0.54
KIFC1-213	ENST00000486695	TSR2	Q969E8	191 aa	Known RBP	11.7	□□□□□ -0.54
KIFC1-213	ENST00000486695	RGS12	O14924	1447 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	CAMTA1	Q9Y6Y1	1673 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	FAM83G	A6ND36	823 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	DCAF8L1	A6NGE4	600 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	EXOSC9	Q06265	439 aa	Known RBP	11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	RAPGEF4	Q8WZA2	1011 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	CFAP44	Q96MT7	982 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	THUMPD2	Q9BTF0	503 aa	Known RBP	11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	NCAPD2	Q15021	1401 aa		11.69	□□□□□ -0.54
KIFC1-213	ENST00000486695	ZNF853	P0CG23	659 aa		11.68	□□□□□ -0.54
KIFC1-213	ENST00000486695	TAT	P17735	454 aa	Predicted RBP	11.68	□□□□□ -0.54
KIFC1-213	ENST00000486695	EVA1C	P58658	441 aa		11.68	□□□□□ -0.54
KIFC1-213	ENST00000486695	DCTN1	Q14203	1278 aa		11.68	□□□□□ -0.54
KIFC1-213	ENST00000486695	MCM10	Q7L590	875 aa		11.68	□□□□□ -0.54
KIFC1-213	ENST00000486695	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.68	□□□□□ -0.54
KIFC1-213	ENST00000486695	MAP3K5	Q99683	1374 aa		11.67	□□□□□ -0.54
KIFC1-213	ENST00000486695	C1orf141	Q5JVX7	400 aa		11.67	□□□□□ -0.54
KIFC1-213	ENST00000486695	USP21	Q9UK80	565 aa		11.67	□□□□□ -0.54
KIFC1-213	ENST00000486695	LMO7	Q8WWI1	1683 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	CANX	P27824	592 aa	Known RBP	11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	RARS	P54136	660 aa	Known RBP	11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	AKAP4	Q5JQC9	854 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	TOM1L2	Q6ZVM7	507 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	ZNF428	Q96B54	188 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	MBIP	Q9NS73	344 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	PPP4R2	Q9NY27	417 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	SPG7	Q9UQ90	795 aa		11.66	□□□□□ -0.54
KIFC1-213	ENST00000486695	WDR17	Q8IZU2	1322 aa		11.65	□□□□□ -0.54
KIFC1-213	ENST00000486695	CHL1	O00533	1208 aa		11.65	□□□□□ -0.54
KIFC1-213	ENST00000486695	PLIN1	O60240	522 aa		11.65	□□□□□ -0.54
KIFC1-213	ENST00000486695	BCAR3	O75815	825 aa		11.65	□□□□□ -0.54
KIFC1-213	ENST00000486695	TRPC5	Q9UL62	973 aa	Predicted RBP	11.65	□□□□□ -0.54
KIFC1-213	ENST00000486695	PLEKHG2	Q9H7P9	1386 aa		11.65	□□□□□ -0.55
KIFC1-213	ENST00000486695	CRB1	P82279	1406 aa		11.64	□□□□□ -0.55
KIFC1-213	ENST00000486695	STRN4	Q9NRL3	753 aa		11.64	□□□□□ -0.55
KIFC1-213	ENST00000486695	BABAM1	Q9NWV8	329 aa		11.64	□□□□□ -0.55
KIFC1-213	ENST00000486695	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	6e-8	■□□□□ 8.4
KIFC1-213	ENST00000486695	COL14A1	Q05707	1796 aa	Known RBP	11.64	□□□□□ -0.55
KIFC1-213	ENST00000486695	MS4A1	P11836	297 aa		11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	TAF7	Q15545	349 aa	Predicted RBP	11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	ALDH1L2	Q3SY69	923 aa		11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	IL17RE	Q8NFR9	667 aa		11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	CARD10	Q9BWT7	1032 aa		11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	SMC4	Q9NTJ3	1288 aa		11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	TSPYL4	Q9UJ04	414 aa		11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695		U3KPZ7	1027 aa	Predicted RBP	11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	COL5A2	P05997	1499 aa	Predicted RBP	11.63	□□□□□ -0.55
KIFC1-213	ENST00000486695	ATRN	O75882	1429 aa		11.62	□□□□□ -0.55
KIFC1-213	ENST00000486695	TEF	Q10587	303 aa		11.62	□□□□□ -0.55
KIFC1-213	ENST00000486695	TWISTNB	Q3B726	338 aa	Predicted RBP	11.62	□□□□□ -0.55
KIFC1-213	ENST00000486695	FRAT1	Q92837	279 aa	Predicted RBP	11.62	□□□□□ -0.55
KIFC1-213	ENST00000486695	IPO8	O15397	1037 aa	Known RBP	11.61	□□□□□ -0.55
KIFC1-213	ENST00000486695	VAMP4	O75379	141 aa		11.61	□□□□□ -0.55
KIFC1-213	ENST00000486695	PDE3A	Q14432	1141 aa		11.61	□□□□□ -0.55
KIFC1-213	ENST00000486695	BTG4	Q9NY30	223 aa		11.61	□□□□□ -0.55
KIFC1-213	ENST00000486695	LRRC37A3	O60309	1634 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	ELL2	O00472	640 aa	Predicted RBP	11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	RNMT	O43148	476 aa	Known RBP	11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	HSP90AB1	P08238	724 aa	Known RBP	11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	IL2RB	P14784	551 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms