RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
NELFCD-209ENST00000486263 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
NELFCD-209ENST00000486263 THSD7AQ9UPZ6 1657 aa18.35■□□□□ 0.53
NELFCD-209ENST00000486263 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
NELFCD-209ENST00000486263 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
NELFCD-209ENST00000486263 RGPD1P0DJD0 1748 aa18.34■□□□□ 0.53
NELFCD-209ENST00000486263 KDRP35968 1356 aa18.33■□□□□ 0.53
NELFCD-209ENST00000486263 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
NELFCD-209ENST00000486263 A0A0G2JS52 829 aa18.33■□□□□ 0.52
NELFCD-209ENST00000486263 MYT1Q01538 1121 aa18.33■□□□□ 0.52
NELFCD-209ENST00000486263 YTHDC1Q96MU7 727 aaKnown RBP18.33■□□□□ 0.52
NELFCD-209ENST00000486263 EP400Q96L91 3159 aa18.33■□□□□ 0.52
NELFCD-209ENST00000486263 PLEKHF1Q96S99 279 aa18.32■□□□□ 0.52
NELFCD-209ENST00000486263 IL2RBP14784 551 aa18.31■□□□□ 0.52
NELFCD-209ENST00000486263 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
NELFCD-209ENST00000486263 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
NELFCD-209ENST00000486263 APAF1O14727 1248 aa18.3■□□□□ 0.52
NELFCD-209ENST00000486263 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
NELFCD-209ENST00000486263 NCAPD2Q15021 1401 aa18.3■□□□□ 0.52
NELFCD-209ENST00000486263 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
NELFCD-209ENST00000486263 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
NELFCD-209ENST00000486263 SPG7Q9UQ90 795 aa18.29■□□□□ 0.52
NELFCD-209ENST00000486263 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
NELFCD-209ENST00000486263 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
NELFCD-209ENST00000486263 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
NELFCD-209ENST00000486263 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
NELFCD-209ENST00000486263 NFE2L2Q16236 605 aa18.27■□□□□ 0.52
NELFCD-209ENST00000486263 PARP4Q9UKK3 1724 aaKnown RBP18.26■□□□□ 0.51
NELFCD-209ENST00000486263 TMPOP42166 694 aaKnown RBP18.26■□□□□ 0.51
NELFCD-209ENST00000486263 RRP7AQ9Y3A4 280 aaKnown RBP18.26■□□□□ 0.51
NELFCD-209ENST00000486263 RIPK4P57078 832 aa18.25■□□□□ 0.51
NELFCD-209ENST00000486263 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
NELFCD-209ENST00000486263 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
NELFCD-209ENST00000486263 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
NELFCD-209ENST00000486263 ZNF530Q6P9A1 599 aaPredicted RBP18.25■□□□□ 0.51
NELFCD-209ENST00000486263 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
NELFCD-209ENST00000486263 ZCRB1Q8TBF4 217 aaKnown RBP18.25■□□□□ 0.51
NELFCD-209ENST00000486263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.519e-9■□□□□ 9.1
NELFCD-209ENST00000486263 MEGF6O75095 1541 aa18.24■□□□□ 0.51
NELFCD-209ENST00000486263 EXOC5O00471 708 aa18.24■□□□□ 0.51
NELFCD-209ENST00000486263 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
NELFCD-209ENST00000486263 FAM196AQ6ZSG2 479 aa18.24■□□□□ 0.51
NELFCD-209ENST00000486263 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
NELFCD-209ENST00000486263 SF3B2Q13435 895 aaKnown RBP18.23■□□□□ 0.51
NELFCD-209ENST00000486263 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
NELFCD-209ENST00000486263 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
NELFCD-209ENST00000486263 DDB1Q16531 1140 aa18.22■□□□□ 0.51
NELFCD-209ENST00000486263 WNK3Q9BYP7 1800 aa18.21■□□□□ 0.51
NELFCD-209ENST00000486263 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
NELFCD-209ENST00000486263 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
NELFCD-209ENST00000486263 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
NELFCD-209ENST00000486263 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
NELFCD-209ENST00000486263 AKAP4Q5JQC9 854 aa18.2■□□□□ 0.5
NELFCD-209ENST00000486263 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
NELFCD-209ENST00000486263 DISP2A7MBM2 1401 aa18.2■□□□□ 0.5
NELFCD-209ENST00000486263 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
NELFCD-209ENST00000486263 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
NELFCD-209ENST00000486263 MAP3K5Q99683 1374 aa18.18■□□□□ 0.5
NELFCD-209ENST00000486263 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
NELFCD-209ENST00000486263 LRRC37A3O60309 1634 aa18.17■□□□□ 0.5
NELFCD-209ENST00000486263 PHKG2P15735 406 aa18.17■□□□□ 0.5
NELFCD-209ENST00000486263 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
NELFCD-209ENST00000486263 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
NELFCD-209ENST00000486263 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
NELFCD-209ENST00000486263 BAG6P46379 1132 aa18.16■□□□□ 0.5
NELFCD-209ENST00000486263 WWC1Q8IX03 1113 aa18.16■□□□□ 0.5
NELFCD-209ENST00000486263 ZBED9Q6R2W3 1325 aa18.16■□□□□ 0.5
NELFCD-209ENST00000486263 BCL9O00512 1426 aa18.15■□□□□ 0.5
NELFCD-209ENST00000486263 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
NELFCD-209ENST00000486263 CYP27B1O15528 508 aa18.15■□□□□ 0.5
NELFCD-209ENST00000486263 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
NELFCD-209ENST00000486263 PKD1L3Q7Z443 1732 aa18.15■□□□□ 0.5
NELFCD-209ENST00000486263 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
NELFCD-209ENST00000486263 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
NELFCD-209ENST00000486263 MCM10Q7L590 875 aa18.14■□□□□ 0.49
NELFCD-209ENST00000486263 DEFB132Q7Z7B7 95 aa18.13■□□□□ 0.49
NELFCD-209ENST00000486263 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
NELFCD-209ENST00000486263 DCAF5Q96JK2 942 aa18.13■□□□□ 0.49
NELFCD-209ENST00000486263 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
NELFCD-209ENST00000486263 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
NELFCD-209ENST00000486263 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
NELFCD-209ENST00000486263 TEFQ10587 303 aa18.12■□□□□ 0.49
NELFCD-209ENST00000486263 TRIM37O94972 964 aa18.11■□□□□ 0.49
NELFCD-209ENST00000486263 MARCH10Q8NA82 808 aaPredicted RBP18.11■□□□□ 0.49
NELFCD-209ENST00000486263 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
NELFCD-209ENST00000486263 LAS1LQ9Y4W2 734 aaKnown RBP18.11■□□□□ 0.49
NELFCD-209ENST00000486263 SBF2Q86WG5 1849 aa18.11■□□□□ 0.49
NELFCD-209ENST00000486263 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
NELFCD-209ENST00000486263 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
NELFCD-209ENST00000486263 LGR6Q9HBX8 967 aa18.1■□□□□ 0.49
NELFCD-209ENST00000486263 CABP4P57796 275 aa18.09■□□□□ 0.49
NELFCD-209ENST00000486263 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
NELFCD-209ENST00000486263 IL16Q14005 1332 aa18.08■□□□□ 0.49
NELFCD-209ENST00000486263 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
NELFCD-209ENST00000486263 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
NELFCD-209ENST00000486263 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
NELFCD-209ENST00000486263 E9PSI1 815 aa18.07■□□□□ 0.48
NELFCD-209ENST00000486263 APBA3O96018 575 aa18.07■□□□□ 0.48
NELFCD-209ENST00000486263 GNAI1P63096 354 aa18.07■□□□□ 0.48
NELFCD-209ENST00000486263 EN1Q05925 392 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms