RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
XRN1-212ENST00000486211 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
XRN1-212ENST00000486211 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
XRN1-212ENST00000486211 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
XRN1-212ENST00000486211 NHSQ6T4R5 1651 aa12.4□□□□□ -0.42
XRN1-212ENST00000486211 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
XRN1-212ENST00000486211 MAMSTRQ6ZN01 415 aa12.39□□□□□ -0.43
XRN1-212ENST00000486211 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
XRN1-212ENST00000486211 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
XRN1-212ENST00000486211 ACEP12821 1306 aa12.38□□□□□ -0.43
XRN1-212ENST00000486211 COL18A1P39060 1754 aa12.38□□□□□ -0.43
XRN1-212ENST00000486211 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
XRN1-212ENST00000486211 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
XRN1-212ENST00000486211 SLC16A10Q8TF71 515 aa12.38□□□□□ -0.43
XRN1-212ENST00000486211 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
XRN1-212ENST00000486211 COL13A1Q5TAT6 717 aaPredicted RBP12.37□□□□□ -0.43
XRN1-212ENST00000486211 TOM1L2Q6ZVM7 507 aa12.37□□□□□ -0.43
XRN1-212ENST00000486211 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
XRN1-212ENST00000486211 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
XRN1-212ENST00000486211 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
XRN1-212ENST00000486211 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
XRN1-212ENST00000486211 POLD1P28340 1107 aa12.36□□□□□ -0.43
XRN1-212ENST00000486211 WDR17Q8IZU2 1322 aa12.36□□□□□ -0.43
XRN1-212ENST00000486211 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
XRN1-212ENST00000486211 KIF3CO14782 793 aa12.35□□□□□ -0.43
XRN1-212ENST00000486211 NLRP13Q86W25 1043 aa12.35□□□□□ -0.43
XRN1-212ENST00000486211 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
XRN1-212ENST00000486211 SLIT3O75094 1523 aa12.35□□□□□ -0.43
XRN1-212ENST00000486211 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
XRN1-212ENST00000486211 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
XRN1-212ENST00000486211 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
XRN1-212ENST00000486211 APLP1P51693 650 aa12.34□□□□□ -0.43
XRN1-212ENST00000486211 AXIN2Q9Y2T1 843 aa12.34□□□□□ -0.43
XRN1-212ENST00000486211 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
XRN1-212ENST00000486211 BTAF1O14981 1849 aa12.34□□□□□ -0.43
XRN1-212ENST00000486211 PRELPP51888 382 aa12.33□□□□□ -0.44
XRN1-212ENST00000486211 USP6P35125 1406 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 MPHOSPH9Q99550 1183 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 CARD10Q9BWT7 1032 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 CDK19Q9BWU1 502 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 SCUBE2Q9NQ36 999 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 TRPM1Q7Z4N2 1603 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 ABCC6O95255 1503 aa12.32□□□□□ -0.44
XRN1-212ENST00000486211 BRD4O60885 1362 aaPredicted RBP12.31□□□□□ -0.44
XRN1-212ENST00000486211 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
XRN1-212ENST00000486211 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
XRN1-212ENST00000486211 EXOC5O00471 708 aa12.31□□□□□ -0.44
XRN1-212ENST00000486211 SLC34A2O95436 690 aa12.31□□□□□ -0.44
XRN1-212ENST00000486211 SEC24BO95487 1268 aa12.3□□□□□ -0.44
XRN1-212ENST00000486211 CPSF1Q10570 1443 aaKnown RBP12.29□□□□□ -0.44
XRN1-212ENST00000486211 RGPD5Q99666 1765 aa12.29□□□□□ -0.44
XRN1-212ENST00000486211 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
XRN1-212ENST00000486211 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
XRN1-212ENST00000486211 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
XRN1-212ENST00000486211 TNS4Q8IZW8 715 aa12.28□□□□□ -0.44
XRN1-212ENST00000486211 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
XRN1-212ENST00000486211 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
XRN1-212ENST00000486211 PPIP5K1Q6PFW1 1433 aa12.28□□□□□ -0.44
XRN1-212ENST00000486211 WDR90Q96KV7 1748 aa12.27□□□□□ -0.45
XRN1-212ENST00000486211 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
XRN1-212ENST00000486211 PIK3C2AO00443 1686 aa12.26□□□□□ -0.45
XRN1-212ENST00000486211 NLRP6P59044 892 aa12.26□□□□□ -0.45
XRN1-212ENST00000486211 SLC27A3Q5K4L6 730 aa12.26□□□□□ -0.45
XRN1-212ENST00000486211 ARHGEF25Q86VW2 580 aa12.26□□□□□ -0.45
XRN1-212ENST00000486211 TFCP2L1Q9NZI6 479 aa12.26□□□□□ -0.45
XRN1-212ENST00000486211 POTEMA6NI47 508 aa12.25□□□□□ -0.45
XRN1-212ENST00000486211 COLQQ9Y215 455 aaPredicted RBP12.25□□□□□ -0.45
XRN1-212ENST00000486211 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
XRN1-212ENST00000486211 TOMM70O94826 608 aa12.24□□□□□ -0.45
XRN1-212ENST00000486211 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
XRN1-212ENST00000486211 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
XRN1-212ENST00000486211 KCNQ4P56696 695 aa12.24□□□□□ -0.45
XRN1-212ENST00000486211 IER5LQ5T953 404 aa12.24□□□□□ -0.45
XRN1-212ENST00000486211 KLRG1Q96E93 195 aa12.24□□□□□ -0.45
XRN1-212ENST00000486211 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
XRN1-212ENST00000486211 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
XRN1-212ENST00000486211 HTRA3P83110 453 aa12.22□□□□□ -0.45
XRN1-212ENST00000486211 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
XRN1-212ENST00000486211 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
XRN1-212ENST00000486211 LY75O60449 1722 aa12.22□□□□□ -0.45
XRN1-212ENST00000486211 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
XRN1-212ENST00000486211 NFAT5O94916 1531 aa12.21□□□□□ -0.45
XRN1-212ENST00000486211 MSL1Q68DK7 614 aa12.21□□□□□ -0.45
XRN1-212ENST00000486211 PYGBP11216 843 aa12.2□□□□□ -0.46
XRN1-212ENST00000486211 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
XRN1-212ENST00000486211 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
XRN1-212ENST00000486211 NSD2O96028 1365 aa12.18□□□□□ -0.46
XRN1-212ENST00000486211 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
XRN1-212ENST00000486211 IL2RBP14784 551 aa12.18□□□□□ -0.46
XRN1-212ENST00000486211 DCAF11Q8TEB1 546 aa12.18□□□□□ -0.46
XRN1-212ENST00000486211 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
XRN1-212ENST00000486211 KCNH5Q8NCM2 988 aa12.17□□□□□ -0.46
XRN1-212ENST00000486211 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
XRN1-212ENST00000486211 NMRK2Q9NPI5 230 aa12.17□□□□□ -0.46
XRN1-212ENST00000486211 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
XRN1-212ENST00000486211 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
XRN1-212ENST00000486211 ERBB3P21860 1342 aa12.16□□□□□ -0.46
XRN1-212ENST00000486211 SOX12O15370 315 aa12.16□□□□□ -0.46
XRN1-212ENST00000486211 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms