RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 CHL1O00533 1208 aa28.03■■■□□ 2.08
CDK5-204ENST00000485972 CSB-PGBD3P0DP91 1061 aa28.03■■■□□ 2.08
CDK5-204ENST00000485972 PLEKHO1Q53GL0 409 aaPredicted RBP28.03■■■□□ 2.08
CDK5-204ENST00000485972 MAP3K5Q99683 1374 aa28.03■■■□□ 2.08
CDK5-204ENST00000485972 CRB1P82279 1406 aa28.03■■■□□ 2.08
CDK5-204ENST00000485972 COL18A1P39060 1754 aa28.02■■■□□ 2.08
CDK5-204ENST00000485972 AMOTQ4VCS5 1084 aa28.01■■■□□ 2.08
CDK5-204ENST00000485972 RGPD2P0DJD1 1756 aa28.01■■■□□ 2.07
CDK5-204ENST00000485972 SSH1Q8WYL5 1049 aa28.01■■■□□ 2.07
CDK5-204ENST00000485972 CCDC136Q96JN2 1154 aa28.01■■■□□ 2.07
CDK5-204ENST00000485972 SMC4Q9NTJ3 1288 aa28.01■■■□□ 2.07
CDK5-204ENST00000485972 ROBO1Q9Y6N7 1651 aa28.01■■■□□ 2.07
CDK5-204ENST00000485972 PELP1Q8IZL8 1130 aaKnown RBP28■■■□□ 2.07
CDK5-204ENST00000485972 ZNF428Q96B54 188 aa28■■■□□ 2.07
CDK5-204ENST00000485972 PDE3AQ14432 1141 aa27.99■■■□□ 2.07
CDK5-204ENST00000485972 RGPD5Q99666 1765 aa27.99■■■□□ 2.07
CDK5-204ENST00000485972 VAMP4O75379 141 aa27.99■■■□□ 2.07
CDK5-204ENST00000485972 CAMTA1Q9Y6Y1 1673 aa27.98■■■□□ 2.07
CDK5-204ENST00000485972 TSPYL6Q8N831 410 aa27.98■■■□□ 2.07
CDK5-204ENST00000485972 IL17REQ8NFR9 667 aa27.98■■■□□ 2.07
CDK5-204ENST00000485972 ALDH1L2Q3SY69 923 aa27.97■■■□□ 2.07
CDK5-204ENST00000485972 C8orf58Q8NAV2 365 aa27.97■■■□□ 2.07
CDK5-204ENST00000485972 ZNF530Q6P9A1 599 aaPredicted RBP27.96■■■□□ 2.07
CDK5-204ENST00000485972 ELL2O00472 640 aaPredicted RBP27.96■■■□□ 2.07
CDK5-204ENST00000485972 TWISTNBQ3B726 338 aaPredicted RBP27.96■■■□□ 2.07
CDK5-204ENST00000485972 AHDC1Q5TGY3 1603 aaPredicted RBP27.95■■■□□ 2.07
CDK5-204ENST00000485972 TOM1O60784 492 aa27.95■■■□□ 2.06
CDK5-204ENST00000485972 AKAP4Q5JQC9 854 aa27.95■■■□□ 2.06
CDK5-204ENST00000485972 RAPGEF4Q8WZA2 1011 aa27.95■■■□□ 2.06
CDK5-204ENST00000485972 LMO7Q8WWI1 1683 aa27.95■■■□□ 2.06
CDK5-204ENST00000485972 MIS18AQ9NYP9 233 aa27.94■■■□□ 2.06
CDK5-204ENST00000485972 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
CDK5-204ENST00000485972 TSPYL4Q9UJ04 414 aa27.94■■■□□ 2.06
CDK5-204ENST00000485972 ZKSCAN2Q63HK3 967 aa27.93■■■□□ 2.06
CDK5-204ENST00000485972 C1orf141Q5JVX7 400 aa27.92■■■□□ 2.06
CDK5-204ENST00000485972 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
CDK5-204ENST00000485972 TATP17735 454 aaPredicted RBP27.91■■■□□ 2.06
CDK5-204ENST00000485972 ABCA3Q99758 1704 aa27.9■■■□□ 2.06
CDK5-204ENST00000485972 TAF7Q15545 349 aaPredicted RBP27.9■■■□□ 2.06
CDK5-204ENST00000485972 WDR17Q8IZU2 1322 aa27.9■■■□□ 2.06
CDK5-204ENST00000485972 PIP4K2BP78356 416 aa27.89■■■□□ 2.06
CDK5-204ENST00000485972 NOB1Q9ULX3 412 aaKnown RBP27.89■■■□□ 2.06
CDK5-204ENST00000485972 CEMIPQ8WUJ3 1361 aa27.89■■■□□ 2.06
CDK5-204ENST00000485972 LGR6Q9HBX8 967 aa27.88■■■□□ 2.05
CDK5-204ENST00000485972 BABAM1Q9NWV8 329 aa27.88■■■□□ 2.05
CDK5-204ENST00000485972 KIF16BQ96L93 1317 aa27.88■■■□□ 2.05
CDK5-204ENST00000485972 BRPF1P55201 1214 aaPredicted RBP27.88■■■□□ 2.05
CDK5-204ENST00000485972 IPO8O15397 1037 aaKnown RBP27.87■■■□□ 2.05
CDK5-204ENST00000485972 MS4A1P11836 297 aa27.87■■■□□ 2.05
CDK5-204ENST00000485972 KRT24Q2M2I5 525 aa27.87■■■□□ 2.05
CDK5-204ENST00000485972 TOM1L2Q6ZVM7 507 aa27.87■■■□□ 2.05
CDK5-204ENST00000485972 TNNQ9UQP3 1299 aa27.87■■■□□ 2.05
CDK5-204ENST00000485972 COG6Q9Y2V7 657 aa27.87■■■□□ 2.05
CDK5-204ENST00000485972 LRRC37A3O60309 1634 aa27.87■■■□□ 2.05
CDK5-204ENST00000485972 FAM208AQ9UK61 1670 aaKnown RBP27.87■■■□□ 2.05
CDK5-204ENST00000485972 MPRIPQ6WCQ1 1025 aa27.86■■■□□ 2.05
CDK5-204ENST00000485972 CLUAP1Q96AJ1 413 aa27.86■■■□□ 2.05
CDK5-204ENST00000485972 COL5A2P05997 1499 aaPredicted RBP27.86■■■□□ 2.05
CDK5-204ENST00000485972 RLBP1P12271 317 aa27.86■■■□□ 2.05
CDK5-204ENST00000485972 MRPL50Q8N5N7 158 aaKnown RBP27.86■■■□□ 2.05
CDK5-204ENST00000485972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.86■■■□□ 2.05
CDK5-204ENST00000485972 SPG7Q9UQ90 795 aa27.86■■■□□ 2.05
CDK5-204ENST00000485972 EVA1CP58658 441 aa27.85■■■□□ 2.05
CDK5-204ENST00000485972 ATF7IPQ6VMQ6 1270 aa27.85■■■□□ 2.05
CDK5-204ENST00000485972 FTSJ3Q8IY81 847 aaKnown RBP27.84■■■□□ 2.05
CDK5-204ENST00000485972 DZIP1LQ8IYY4 767 aaKnown RBP27.84■■■□□ 2.05
CDK5-204ENST00000485972 MEGF6O75095 1541 aa27.84■■■□□ 2.05
CDK5-204ENST00000485972 PLEKHG2Q9H7P9 1386 aa27.84■■■□□ 2.05
CDK5-204ENST00000485972 UBAP1LF5GYI3 381 aa27.83■■■□□ 2.05
CDK5-204ENST00000485972 RNMTO43148 476 aaKnown RBP27.83■■■□□ 2.05
CDK5-204ENST00000485972 TRIM27P14373 513 aa27.83■■■□□ 2.05
CDK5-204ENST00000485972 STRN4Q9NRL3 753 aa27.83■■■□□ 2.05
CDK5-204ENST00000485972 TCERG1O14776 1098 aaKnown RBP27.83■■■□□ 2.05
CDK5-204ENST00000485972 TEFQ10587 303 aa27.82■■■□□ 2.04
CDK5-204ENST00000485972 CARD10Q9BWT7 1032 aa27.81■■■□□ 2.04
CDK5-204ENST00000485972 LARP1Q6PKG0 1096 aaKnown RBP27.79■■■□□ 2.04
CDK5-204ENST00000485972 COL22A1Q8NFW1 1626 aaPredicted RBP27.79■■■□□ 2.04
CDK5-204ENST00000485972 BTG4Q9NY30 223 aa27.78■■■□□ 2.04
CDK5-204ENST00000485972 OVOS2A0A0G2JMS6 1433 aa27.78■■■□□ 2.04
CDK5-204ENST00000485972 PHLPP1O60346 1717 aa27.78■■■□□ 2.04
CDK5-204ENST00000485972 PHKG2P15735 406 aa27.78■■■□□ 2.04
CDK5-204ENST00000485972 ARHGAP45Q92619 1136 aa27.78■■■□□ 2.04
CDK5-204ENST00000485972 MVPQ14764 893 aaKnown RBP27.77■■■□□ 2.04
CDK5-204ENST00000485972 IFNL2Q8IZJ0 200 aa27.77■■■□□ 2.04
CDK5-204ENST00000485972 COL16A1Q07092 1604 aaPredicted RBP27.76■■■□□ 2.03
CDK5-204ENST00000485972 BTBD11A6QL63 1104 aa27.75■■■□□ 2.03
CDK5-204ENST00000485972 AAMPQ13685 434 aa27.75■■■□□ 2.03
CDK5-204ENST00000485972 SOS1Q07889 1333 aaPredicted RBP27.73■■■□□ 2.03
CDK5-204ENST00000485972 CYP27B1O15528 508 aa27.73■■■□□ 2.03
CDK5-204ENST00000485972 IL2RBP14784 551 aa27.73■■■□□ 2.03
CDK5-204ENST00000485972 ITPRIPQ8IWB1 547 aa27.71■■■□□ 2.03
CDK5-204ENST00000485972 TMEM57Q8N5G2 664 aa27.71■■■□□ 2.03
CDK5-204ENST00000485972 ZCRB1Q8TBF4 217 aaKnown RBP27.71■■■□□ 2.03
CDK5-204ENST00000485972 API5Q9BZZ5 524 aaKnown RBP27.71■■■□□ 2.03
CDK5-204ENST00000485972 HSP90AB1P08238 724 aaKnown RBP27.7■■■□□ 2.02
CDK5-204ENST00000485972 EIF4A1P60842 406 aaKnown RBP27.7■■■□□ 2.02
CDK5-204ENST00000485972 DCAF5Q96JK2 942 aa27.7■■■□□ 2.02
CDK5-204ENST00000485972 COL14A1Q05707 1796 aaKnown RBP27.7■■■□□ 2.02
CDK5-204ENST00000485972 ADAMTS2O95450 1211 aa27.69■■■□□ 2.02
CDK5-204ENST00000485972 SLC4A2P04920 1241 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms