RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PUS7Q96PZ0 661 aaKnown RBP6.72□□□□□ -1.33
RTN4-213ENST00000485749 BCL11AQ9H165 835 aa6.72□□□□□ -1.33
RTN4-213ENST00000485749 DNMT3LQ9UJW3 386 aa6.72□□□□□ -1.33
RTN4-213ENST00000485749 PTK2Q05397 1052 aa6.71□□□□□ -1.34
RTN4-213ENST00000485749 PPP1R26Q5T8A7 1209 aaPredicted RBP6.71□□□□□ -1.34
RTN4-213ENST00000485749 GLMNQ92990 594 aa6.71□□□□□ -1.34
RTN4-213ENST00000485749 PBXIP1Q96AQ6 731 aa6.71□□□□□ -1.34
RTN4-213ENST00000485749 FKBPLQ9UIM3 349 aa6.71□□□□□ -1.34
RTN4-213ENST00000485749 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
RTN4-213ENST00000485749 SPINT1O43278 529 aa6.7□□□□□ -1.34
RTN4-213ENST00000485749 NBPF20Q3BBV1 942 aa6.7□□□□□ -1.34
RTN4-213ENST00000485749 RTL5Q5HYW3 569 aaPredicted RBP6.7□□□□□ -1.34
RTN4-213ENST00000485749 Q6ZVU0 165 aa6.7□□□□□ -1.34
RTN4-213ENST00000485749 KCTD15Q96SI1 283 aaPredicted RBP6.7□□□□□ -1.34
RTN4-213ENST00000485749 POLR3GLQ9BT43 218 aa6.7□□□□□ -1.34
RTN4-213ENST00000485749 IGSF3O75054 1194 aa6.69□□□□□ -1.34
RTN4-213ENST00000485749 PTSQ03393 145 aa6.69□□□□□ -1.34
RTN4-213ENST00000485749 FBXO31Q5XUX0 539 aaPredicted RBP6.69□□□□□ -1.34
RTN4-213ENST00000485749 NANOS1Q8WY41 292 aaKnown RBP6.69□□□□□ -1.34
RTN4-213ENST00000485749 NEFLP07196 543 aa6.68□□□□□ -1.34
RTN4-213ENST00000485749 ABL2P42684 1182 aa6.68□□□□□ -1.34
RTN4-213ENST00000485749 WASHC4Q2M389 1173 aa6.68□□□□□ -1.34
RTN4-213ENST00000485749 TAF7LQ5H9L4 462 aa6.68□□□□□ -1.34
RTN4-213ENST00000485749 AMOTL2Q9Y2J4 779 aa6.68□□□□□ -1.34
RTN4-213ENST00000485749 TMEM151AQ8N4L1 468 aa6.67□□□□□ -1.34
RTN4-213ENST00000485749 CNTNAP3BQ96NU0 1288 aa6.67□□□□□ -1.34
RTN4-213ENST00000485749 CNTNAP3Q9BZ76 1288 aa6.67□□□□□ -1.34
RTN4-213ENST00000485749 FIGNL2A6NMB9 653 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 AP1G2O75843 785 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 CSB-PGBD3P0DP91 1061 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
RTN4-213ENST00000485749 CTDSPL2Q05D32 466 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 SV2AQ7L0J3 742 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 FAM9AQ8IZU1 332 aaPredicted RBP6.66□□□□□ -1.34
RTN4-213ENST00000485749 SVOPQ8N4V2 548 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 CCDC155Q8N6L0 562 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 TBC1D2BQ9UPU7 963 aa6.66□□□□□ -1.34
RTN4-213ENST00000485749 POM121CA8CG34 1229 aa6.65□□□□□ -1.34
RTN4-213ENST00000485749 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
RTN4-213ENST00000485749 POLMQ9NP87 494 aaPredicted RBP6.65□□□□□ -1.34
RTN4-213ENST00000485749 NDUFB9Q9Y6M9 179 aa6.65□□□□□ -1.34
RTN4-213ENST00000485749 SLC35F4A4IF30 521 aa6.64□□□□□ -1.35
RTN4-213ENST00000485749 E9PSI1 815 aa6.64□□□□□ -1.35
RTN4-213ENST00000485749 ITGA6P23229 1130 aa6.64□□□□□ -1.35
RTN4-213ENST00000485749 CBLBQ13191 982 aa6.64□□□□□ -1.35
RTN4-213ENST00000485749 HDGFL1Q5TGJ6 251 aa6.64□□□□□ -1.35
RTN4-213ENST00000485749 CDC14CA4D256 554 aa6.63□□□□□ -1.35
RTN4-213ENST00000485749 GDF11O95390 407 aa6.63□□□□□ -1.35
RTN4-213ENST00000485749 USP17L8P0C7I0 530 aa6.63□□□□□ -1.35
RTN4-213ENST00000485749 INTS6LQ5JSJ4 861 aaKnown RBP6.63□□□□□ -1.35
RTN4-213ENST00000485749 CCDC125Q86Z20 511 aa6.63□□□□□ -1.35
RTN4-213ENST00000485749 ADAMTS8Q9UP79 889 aa6.63□□□□□ -1.35
RTN4-213ENST00000485749 RBM25P49756 843 aaKnown RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 MARSP56192 900 aaKnown RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 RELBQ01201 579 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 RASSF7Q02833 373 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 NR6A1Q15406 480 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 CFAP70Q5T0N1 1121 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 FOXD4L5Q5VV16 416 aaPredicted RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 KANK3Q6NY19 840 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 DZIP3Q86Y13 1208 aaKnown RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 FOXD4L4Q8WXT5 416 aaPredicted RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 ZNF592Q92610 1267 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 SCARF2Q96GP6 870 aaPredicted RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
RTN4-213ENST00000485749 PPP1R12CQ9BZL4 782 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 ENAMQ9NRM1 1142 aa6.62□□□□□ -1.35
RTN4-213ENST00000485749 ADH1AP07327 375 aa6.61□□□□□ -1.35
RTN4-213ENST00000485749 SOX11P35716 441 aa6.61□□□□□ -1.35
RTN4-213ENST00000485749 MAP3K10Q02779 954 aa6.61□□□□□ -1.35
RTN4-213ENST00000485749 ADAM32Q8TC27 787 aa6.61□□□□□ -1.35
RTN4-213ENST00000485749 LRRN4Q8WUT4 740 aa6.61□□□□□ -1.35
RTN4-213ENST00000485749 GMCL1Q96IK5 515 aa6.61□□□□□ -1.35
RTN4-213ENST00000485749 IGHA1P01876 353 aa6.6□□□□□ -1.35
RTN4-213ENST00000485749 SLURP2P0DP57 97 aa6.6□□□□□ -1.35
RTN4-213ENST00000485749 FOXK2Q01167 660 aa6.6□□□□□ -1.35
RTN4-213ENST00000485749 FOXR1Q6PIV2 292 aa6.6□□□□□ -1.35
RTN4-213ENST00000485749 GPR161Q8N6U8 529 aaKnown RBP6.6□□□□□ -1.35
RTN4-213ENST00000485749 INSM2Q96T92 566 aaPredicted RBP6.6□□□□□ -1.35
RTN4-213ENST00000485749 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.59□□□□□ -1.35
RTN4-213ENST00000485749 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.35
RTN4-213ENST00000485749 KRT76Q01546 638 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 ZNF385CQ66K41 422 aaPredicted RBP6.59□□□□□ -1.35
RTN4-213ENST00000485749 LYSMD3Q7Z3D4 306 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 DHX37Q8IY37 1157 aaKnown RBP6.59□□□□□ -1.35
RTN4-213ENST00000485749 VWA5B2Q8N398 1253 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 RNF217Q8TC41 542 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 ADAMTS19Q8TE59 1207 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 ALG2Q9H553 416 aa6.59□□□□□ -1.35
RTN4-213ENST00000485749 ATG7O95352 703 aa6.58□□□□□ -1.36
RTN4-213ENST00000485749 PTGIRP43119 386 aa6.58□□□□□ -1.36
RTN4-213ENST00000485749 SRSF11Q05519 484 aaKnown RBP6.58□□□□□ -1.36
RTN4-213ENST00000485749 AGBL1Q96MI9 1066 aa6.58□□□□□ -1.36
RTN4-213ENST00000485749 VRTNQ9H8Y1 702 aa6.58□□□□□ -1.36
RTN4-213ENST00000485749 DNMT3AQ9Y6K1 912 aaPredicted RBP6.58□□□□□ -1.36
RTN4-213ENST00000485749 PALM3A6NDB9 673 aaPredicted RBP6.57□□□□□ -1.36
RTN4-213ENST00000485749 RFX1P22670 979 aa6.57□□□□□ -1.36
RTN4-213ENST00000485749 SND1Q7KZF4 910 aaKnown RBP eCLIP6.57□□□□□ -1.362e-13■■■■□ 23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms