RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
CLRN1-206ENST00000485607 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
CLRN1-206ENST00000485607 NPDC1Q9NQX5 325 aaPredicted RBP11.19□□□□□ -0.62
CLRN1-206ENST00000485607 JCADQ9P266 1359 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 LRP6O75581 1613 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 ZPR1O75312 459 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 ATF3P18847 181 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 TTC13Q8NBP0 860 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 PRR14Q9BWN1 585 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 PCDHB3Q9Y5E6 796 aa11.18□□□□□ -0.62
CLRN1-206ENST00000485607 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
CLRN1-206ENST00000485607 BRINP3Q76B58 766 aa11.16□□□□□ -0.62
CLRN1-206ENST00000485607 TMUB1Q9BVT8 246 aa11.16□□□□□ -0.62
CLRN1-206ENST00000485607 DCCP43146 1447 aa11.16□□□□□ -0.62
CLRN1-206ENST00000485607 MST1RQ04912 1400 aa11.16□□□□□ -0.62
CLRN1-206ENST00000485607 ASXL1Q8IXJ9 1541 aa11.15□□□□□ -0.62
CLRN1-206ENST00000485607 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
CLRN1-206ENST00000485607 EYA1Q99502 592 aa11.14□□□□□ -0.63
CLRN1-206ENST00000485607 SETD1AO15047 1707 aaKnown RBP11.14□□□□□ -0.63
CLRN1-206ENST00000485607 NALCNQ8IZF0 1738 aa11.14□□□□□ -0.63
CLRN1-206ENST00000485607 KIF1BO60333 1816 aa11.13□□□□□ -0.63
CLRN1-206ENST00000485607 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
CLRN1-206ENST00000485607 BLOC1S3Q6QNY0 202 aa11.12□□□□□ -0.63
CLRN1-206ENST00000485607 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
CLRN1-206ENST00000485607 SPATA31A6Q5VVP1 1343 aa11.11□□□□□ -0.63
CLRN1-206ENST00000485607 SHPRHQ149N8 1683 aa11.11□□□□□ -0.63
CLRN1-206ENST00000485607 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
CLRN1-206ENST00000485607 SLC19A1P41440 591 aa11.11□□□□□ -0.63
CLRN1-206ENST00000485607 NHSL1Q5SYE7 1610 aa11.1□□□□□ -0.63
CLRN1-206ENST00000485607 DNAJB2P25686 324 aa11.1□□□□□ -0.63
CLRN1-206ENST00000485607 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
CLRN1-206ENST00000485607 PPLO60437 1756 aa11.09□□□□□ -0.63
CLRN1-206ENST00000485607 RNF223E7ERA6 249 aa11.09□□□□□ -0.63
CLRN1-206ENST00000485607 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
CLRN1-206ENST00000485607 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
CLRN1-206ENST00000485607 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
CLRN1-206ENST00000485607 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
CLRN1-206ENST00000485607 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
CLRN1-206ENST00000485607 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
CLRN1-206ENST00000485607 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-206ENST00000485607 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-206ENST00000485607 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
CLRN1-206ENST00000485607 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-206ENST00000485607 MEX3CQ5U5Q3 659 aaKnown RBP11.08□□□□□ -0.64
CLRN1-206ENST00000485607 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-206ENST00000485607 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
CLRN1-206ENST00000485607 ADGRF5Q8IZF2 1346 aa11.08□□□□□ -0.64
CLRN1-206ENST00000485607 TLL1O43897 1013 aa11.07□□□□□ -0.64
CLRN1-206ENST00000485607 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
CLRN1-206ENST00000485607 MPHOSPH9Q99550 1183 aa11.07□□□□□ -0.64
CLRN1-206ENST00000485607 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
CLRN1-206ENST00000485607 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
CLRN1-206ENST00000485607 RGL3Q3MIN7 710 aa11.06□□□□□ -0.64
CLRN1-206ENST00000485607 ORAI2Q96SN7 254 aa11.06□□□□□ -0.64
CLRN1-206ENST00000485607 PPEF1O14829 653 aaPredicted RBP11.05□□□□□ -0.64
CLRN1-206ENST00000485607 IFT172Q9UG01 1749 aa11.04□□□□□ -0.64
CLRN1-206ENST00000485607 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
CLRN1-206ENST00000485607 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
CLRN1-206ENST00000485607 LAMC1P11047 1609 aa11.04□□□□□ -0.64
CLRN1-206ENST00000485607 AFF2P51816 1311 aa11.04□□□□□ -0.64
CLRN1-206ENST00000485607 PIK3C2GO75747 1445 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 S1PR4O95977 384 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 PTGDRQ13258 359 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 ZNF772Q68DY9 489 aaPredicted RBP11.03□□□□□ -0.64
CLRN1-206ENST00000485607 STK26Q9P289 416 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 CDC42BPGQ6DT37 1551 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 PLEKHH1Q9ULM0 1364 aa11.03□□□□□ -0.64
CLRN1-206ENST00000485607 TECPR2O15040 1411 aa11.02□□□□□ -0.64
CLRN1-206ENST00000485607 RCCD1A6NED2 376 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 CFHP08603 1231 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 TMEM132EQ6IEE7 984 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 ZNF775Q96BV0 537 aaPredicted RBP11.02□□□□□ -0.65
CLRN1-206ENST00000485607 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
CLRN1-206ENST00000485607 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.65
CLRN1-206ENST00000485607 ANKRD30BQ9BXX2 1392 aa11.02□□□□□ -0.65
CLRN1-206ENST00000485607 ACTN4O43707 911 aaKnown RBP11.01□□□□□ -0.65
CLRN1-206ENST00000485607 ZNF598Q86UK7 904 aaKnown RBP11.01□□□□□ -0.65
CLRN1-206ENST00000485607 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
CLRN1-206ENST00000485607 C8orf37Q96NL8 207 aa11.01□□□□□ -0.65
CLRN1-206ENST00000485607 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
CLRN1-206ENST00000485607 ADAMTS2O95450 1211 aa11□□□□□ -0.65
CLRN1-206ENST00000485607 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
CLRN1-206ENST00000485607 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
CLRN1-206ENST00000485607 PXDNQ92626 1479 aa11□□□□□ -0.65
CLRN1-206ENST00000485607 NR1I2O75469 434 aa10.99□□□□□ -0.65
CLRN1-206ENST00000485607 RXRBP28702 533 aa10.99□□□□□ -0.65
CLRN1-206ENST00000485607 XPCQ01831 940 aaPredicted RBP10.99□□□□□ -0.65
CLRN1-206ENST00000485607 ZNF697Q5TEC3 545 aa10.99□□□□□ -0.65
CLRN1-206ENST00000485607 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
CLRN1-206ENST00000485607 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
CLRN1-206ENST00000485607 YTHDC2Q9H6S0 1430 aaKnown RBP10.99□□□□□ -0.65
CLRN1-206ENST00000485607 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
CLRN1-206ENST00000485607 KNDC1Q76NI1 1749 aa10.98□□□□□ -0.65
CLRN1-206ENST00000485607 DGAT1O75907 488 aa10.98□□□□□ -0.65
CLRN1-206ENST00000485607 ESCO1Q5FWF5 840 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms