RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 INSM2Q96T92 566 aaPredicted RBP7.61□□□□□ -1.19
VPS50-216ENST00000484954 CNTNAP5Q8WYK1 1306 aa7.6□□□□□ -1.19
VPS50-216ENST00000484954 GPR37L1O60883 481 aa7.6□□□□□ -1.19
VPS50-216ENST00000484954 SPOCK3Q9BQ16 436 aa7.6□□□□□ -1.19
VPS50-216ENST00000484954 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
VPS50-216ENST00000484954 ZC3H4Q9UPT8 1303 aaKnown RBP7.59□□□□□ -1.19
VPS50-216ENST00000484954 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
VPS50-216ENST00000484954 DCAF5Q96JK2 942 aa7.59□□□□□ -1.19
VPS50-216ENST00000484954 ITGB2P05107 769 aa7.58□□□□□ -1.2
VPS50-216ENST00000484954 ZNF395Q9H8N7 513 aaPredicted RBP7.58□□□□□ -1.2
VPS50-216ENST00000484954 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
VPS50-216ENST00000484954 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
VPS50-216ENST00000484954 GAS6Q14393 721 aa7.57□□□□□ -1.2
VPS50-216ENST00000484954 ZBTB33Q86T24 672 aa7.57□□□□□ -1.2
VPS50-216ENST00000484954 GALNT6Q8NCL4 622 aa7.57□□□□□ -1.2
VPS50-216ENST00000484954 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
VPS50-216ENST00000484954 CUEDC1Q9NWM3 386 aaPredicted RBP7.57□□□□□ -1.2
VPS50-216ENST00000484954 PTK2Q05397 1052 aa7.56□□□□□ -1.2
VPS50-216ENST00000484954 Q8N3U1 123 aa7.56□□□□□ -1.2
VPS50-216ENST00000484954 RNF217Q8TC41 542 aa7.56□□□□□ -1.2
VPS50-216ENST00000484954 ENAMQ9NRM1 1142 aa7.56□□□□□ -1.2
VPS50-216ENST00000484954 PHF20L1A8MW92 1017 aa7.55□□□□□ -1.2
VPS50-216ENST00000484954 SLC10A4Q96EP9 437 aa7.55□□□□□ -1.2
VPS50-216ENST00000484954 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
VPS50-216ENST00000484954 GPSM3Q9Y4H4 160 aa7.55□□□□□ -1.2
VPS50-216ENST00000484954 PROCP04070 461 aa7.54□□□□□ -1.2
VPS50-216ENST00000484954 FBXO45P0C2W1 286 aa7.54□□□□□ -1.2
VPS50-216ENST00000484954 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
VPS50-216ENST00000484954 GPR25O00155 361 aa7.53□□□□□ -1.2
VPS50-216ENST00000484954 INTS6LQ5JSJ4 861 aaKnown RBP7.53□□□□□ -1.2
VPS50-216ENST00000484954 RAB15P59190 212 aa7.52□□□□□ -1.21
VPS50-216ENST00000484954 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
VPS50-216ENST00000484954 PNMA1Q8ND90 353 aa7.52□□□□□ -1.21
VPS50-216ENST00000484954 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
VPS50-216ENST00000484954 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
VPS50-216ENST00000484954 FOXD4L5Q5VV16 416 aaPredicted RBP7.51□□□□□ -1.21
VPS50-216ENST00000484954 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
VPS50-216ENST00000484954 TMPRSS4Q9NRS4 437 aa7.51□□□□□ -1.21
VPS50-216ENST00000484954 TBC1D2BQ9UPU7 963 aa7.51□□□□□ -1.21
VPS50-216ENST00000484954 IGF1RP08069 1367 aa7.5□□□□□ -1.21
VPS50-216ENST00000484954 SOCS7O14512 581 aa7.5□□□□□ -1.21
VPS50-216ENST00000484954 RHOQP17081 205 aa7.5□□□□□ -1.21
VPS50-216ENST00000484954 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
VPS50-216ENST00000484954 DZIP3Q86Y13 1208 aaKnown RBP7.5□□□□□ -1.21
VPS50-216ENST00000484954 NDUFB9Q9Y6M9 179 aa7.5□□□□□ -1.21
VPS50-216ENST00000484954 MBIPQ9NS73 344 aa7.49□□□□□ -1.21
VPS50-216ENST00000484954 PCDHB9Q9Y5E1 797 aa7.49□□□□□ -1.21
VPS50-216ENST00000484954 BCRP11274 1271 aa7.48□□□□□ -1.21
VPS50-216ENST00000484954 ZNF837Q96EG3 531 aaPredicted RBP7.48□□□□□ -1.21
VPS50-216ENST00000484954 CDV3Q9UKY7 258 aaKnown RBP7.48□□□□□ -1.21
VPS50-216ENST00000484954 ESPNB1AK53 854 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 GIGYF1O75420 1035 aaPredicted RBP7.47□□□□□ -1.21
VPS50-216ENST00000484954 BAG6P46379 1132 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 NR1H3Q13133 447 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 IRF5Q13568 498 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 NBPF20Q3BBV1 942 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 LYSMD3Q7Z3D4 306 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 PRICKLE2Q7Z3G6 844 aa7.47□□□□□ -1.21
VPS50-216ENST00000484954 FURINP09958 794 aa7.46□□□□□ -1.22
VPS50-216ENST00000484954 MCM6Q14566 821 aa7.46□□□□□ -1.22
VPS50-216ENST00000484954 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
VPS50-216ENST00000484954 ZNF784Q8NCA9 323 aaPredicted RBP7.46□□□□□ -1.22
VPS50-216ENST00000484954 ACDQ96AP0 544 aa7.46□□□□□ -1.22
VPS50-216ENST00000484954 BTBD11A6QL63 1104 aa7.45□□□□□ -1.22
VPS50-216ENST00000484954 LILRA1O75019 489 aa7.45□□□□□ -1.22
VPS50-216ENST00000484954 ADH1AP07327 375 aa7.45□□□□□ -1.22
VPS50-216ENST00000484954 GDPD2Q9HCC8 539 aa7.45□□□□□ -1.22
VPS50-216ENST00000484954 ADD1P35611 737 aaKnown RBP7.44□□□□□ -1.22
VPS50-216ENST00000484954 PTGIRP43119 386 aa7.44□□□□□ -1.22
VPS50-216ENST00000484954 FOXR1Q6PIV2 292 aa7.44□□□□□ -1.22
VPS50-216ENST00000484954 GTPBP3Q969Y2 492 aaKnown RBP7.44□□□□□ -1.22
VPS50-216ENST00000484954 KRBA1A5PL33 1030 aa7.43□□□□□ -1.22
VPS50-216ENST00000484954 DBN1Q16643 649 aa7.43□□□□□ -1.22
VPS50-216ENST00000484954 TRIM22Q8IYM9 498 aa7.43□□□□□ -1.22
VPS50-216ENST00000484954 KDF1Q8NAX2 398 aaPredicted RBP7.43□□□□□ -1.22
VPS50-216ENST00000484954 APBB1O00213 710 aa7.42□□□□□ -1.22
VPS50-216ENST00000484954 ABL2P42684 1182 aa7.42□□□□□ -1.22
VPS50-216ENST00000484954 CYLDQ9NQC7 956 aa7.42□□□□□ -1.22
VPS50-216ENST00000484954 SNRPNP63162 240 aaKnown RBP7.41□□□□□ -1.22
VPS50-216ENST00000484954 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
VPS50-216ENST00000484954 POM121Q96HA1 1249 aa7.41□□□□□ -1.22
VPS50-216ENST00000484954 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
VPS50-216ENST00000484954 SCTRP47872 440 aa7.4□□□□□ -1.22
VPS50-216ENST00000484954 SEPT12Q8IYM1 358 aa7.4□□□□□ -1.22
VPS50-216ENST00000484954 MX2P20592 715 aa7.39□□□□□ -1.23
VPS50-216ENST00000484954 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
VPS50-216ENST00000484954 COG6Q9Y2V7 657 aa7.39□□□□□ -1.23
VPS50-216ENST00000484954 OIP5O43482 229 aa7.38□□□□□ -1.23
VPS50-216ENST00000484954 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
VPS50-216ENST00000484954 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
VPS50-216ENST00000484954 GMCL1Q96IK5 515 aa7.38□□□□□ -1.23
VPS50-216ENST00000484954 TRERF1Q96PN7 1200 aa7.38□□□□□ -1.23
VPS50-216ENST00000484954 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
VPS50-216ENST00000484954 MEN1O00255 615 aa7.37□□□□□ -1.23
VPS50-216ENST00000484954 RNF144AP50876 292 aaPredicted RBP7.37□□□□□ -1.23
VPS50-216ENST00000484954 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
VPS50-216ENST00000484954 CCDC85AQ96PX6 553 aaPredicted RBP7.37□□□□□ -1.23
VPS50-216ENST00000484954 PCDHB11Q9Y5F2 797 aa7.37□□□□□ -1.23
VPS50-216ENST00000484954 COL8A1P27658 744 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms