RNA–Protein interactions for RNA: ENST00000484893.1

GINS1-204, Transcript of GINS complex subunit 1, humanhuman

TSL 5

Gene GINS1, Length 583 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-204ENST00000484893 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
GINS1-204ENST00000484893 EXOC5O00471 708 aa17.45■□□□□ 0.38
GINS1-204ENST00000484893 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
GINS1-204ENST00000484893 TATP17735 454 aaPredicted RBP17.45■□□□□ 0.38
GINS1-204ENST00000484893 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
GINS1-204ENST00000484893 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
GINS1-204ENST00000484893 CYP27B1O15528 508 aa17.44■□□□□ 0.38
GINS1-204ENST00000484893 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
GINS1-204ENST00000484893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.388e-6■■■□□ 14.7
GINS1-204ENST00000484893 EP400Q96L91 3159 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 A0A0G2JS52 829 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 MYT1Q01538 1121 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 BCL9O00512 1426 aa17.43■□□□□ 0.38
GINS1-204ENST00000484893 FCHSD2O94868 740 aa17.42■□□□□ 0.38
GINS1-204ENST00000484893 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
GINS1-204ENST00000484893 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
GINS1-204ENST00000484893 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
GINS1-204ENST00000484893 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
GINS1-204ENST00000484893 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
GINS1-204ENST00000484893 MIER1Q8N108 512 aa17.4■□□□□ 0.38
GINS1-204ENST00000484893 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
GINS1-204ENST00000484893 TOGARAM1Q9Y4F4 1720 aa17.39■□□□□ 0.37
GINS1-204ENST00000484893 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
GINS1-204ENST00000484893 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
GINS1-204ENST00000484893 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
GINS1-204ENST00000484893 PTF1AQ7RTS3 328 aa17.38■□□□□ 0.37
GINS1-204ENST00000484893 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
GINS1-204ENST00000484893 ADAMTS7Q9UKP4 1686 aa17.37■□□□□ 0.37
GINS1-204ENST00000484893 PHKG2P15735 406 aa17.37■□□□□ 0.37
GINS1-204ENST00000484893 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
GINS1-204ENST00000484893 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
GINS1-204ENST00000484893 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
GINS1-204ENST00000484893 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
GINS1-204ENST00000484893 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
GINS1-204ENST00000484893 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
GINS1-204ENST00000484893 FAM196AQ6ZSG2 479 aa17.36■□□□□ 0.37
GINS1-204ENST00000484893 DLG5Q8TDM6 1919 aa17.36■□□□□ 0.37
GINS1-204ENST00000484893 KDM6AO15550 1401 aaPredicted RBP17.35■□□□□ 0.37
GINS1-204ENST00000484893 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
GINS1-204ENST00000484893 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
GINS1-204ENST00000484893 ITGB4P16144 1822 aa17.35■□□□□ 0.37
GINS1-204ENST00000484893 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
GINS1-204ENST00000484893 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
GINS1-204ENST00000484893 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
GINS1-204ENST00000484893 IFNL2Q8IZJ0 200 aa17.34■□□□□ 0.37
GINS1-204ENST00000484893 UPF1Q92900 1129 aaKnown RBP eCLIP17.34■□□□□ 0.37
GINS1-204ENST00000484893 SCN11AQ9UI33 1791 aa17.34■□□□□ 0.37
GINS1-204ENST00000484893 KCNQ2O43526 872 aa17.33■□□□□ 0.36
GINS1-204ENST00000484893 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.36
GINS1-204ENST00000484893 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
GINS1-204ENST00000484893 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
GINS1-204ENST00000484893 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
GINS1-204ENST00000484893 TRIM37O94972 964 aa17.3■□□□□ 0.36
GINS1-204ENST00000484893 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
GINS1-204ENST00000484893 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
GINS1-204ENST00000484893 BTAF1O14981 1849 aa17.3■□□□□ 0.36
GINS1-204ENST00000484893 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
GINS1-204ENST00000484893 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
GINS1-204ENST00000484893 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
GINS1-204ENST00000484893 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
GINS1-204ENST00000484893 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
GINS1-204ENST00000484893 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
GINS1-204ENST00000484893 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
GINS1-204ENST00000484893 SOCS7O14512 581 aa17.28■□□□□ 0.36
GINS1-204ENST00000484893 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
GINS1-204ENST00000484893 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
GINS1-204ENST00000484893 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
GINS1-204ENST00000484893 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
GINS1-204ENST00000484893 MRC1P22897 1456 aa17.27■□□□□ 0.36
GINS1-204ENST00000484893 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
GINS1-204ENST00000484893 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
GINS1-204ENST00000484893 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
GINS1-204ENST00000484893 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
GINS1-204ENST00000484893 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
GINS1-204ENST00000484893 ERVV-2B6SEH9 535 aa17.25■□□□□ 0.35
GINS1-204ENST00000484893 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
GINS1-204ENST00000484893 PIGBQ92521 554 aa17.25■□□□□ 0.35
GINS1-204ENST00000484893 APAF1O14727 1248 aa17.24■□□□□ 0.35
GINS1-204ENST00000484893 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
GINS1-204ENST00000484893 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
GINS1-204ENST00000484893 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
GINS1-204ENST00000484893 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
GINS1-204ENST00000484893 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
GINS1-204ENST00000484893 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
GINS1-204ENST00000484893 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
GINS1-204ENST00000484893 LY75O60449 1722 aa17.22■□□□□ 0.35
GINS1-204ENST00000484893 MCM10Q7L590 875 aa17.22■□□□□ 0.35
GINS1-204ENST00000484893 PROM2Q8N271 834 aa17.22■□□□□ 0.35
GINS1-204ENST00000484893 CAMKK2Q96RR4 588 aa17.22■□□□□ 0.35
GINS1-204ENST00000484893 RGPD3A6NKT7 1758 aaPredicted RBP17.22■□□□□ 0.35
GINS1-204ENST00000484893 RGPD4Q7Z3J3 1758 aa17.22■□□□□ 0.35
GINS1-204ENST00000484893 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
GINS1-204ENST00000484893 PLSCR1O15162 318 aa17.21■□□□□ 0.35
GINS1-204ENST00000484893 RIPK4P57078 832 aa17.21■□□□□ 0.35
GINS1-204ENST00000484893 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
GINS1-204ENST00000484893 NFATC2IPQ8NCF5 419 aa17.21■□□□□ 0.35
GINS1-204ENST00000484893 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms