RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 FAM98CQ17RN3 349 aaKnown RBP25.25■■□□□ 1.63
PDLIM4-207ENST00000484620 OVOS2A0A0G2JMS6 1433 aa25.24■■□□□ 1.63
PDLIM4-207ENST00000484620 MAPK8IP3Q9UPT6 1336 aa25.24■■□□□ 1.63
PDLIM4-207ENST00000484620 RXRBP28702 533 aa25.23■■□□□ 1.63
PDLIM4-207ENST00000484620 A0A0G2JS52 829 aa25.22■■□□□ 1.63
PDLIM4-207ENST00000484620 MYT1Q01538 1121 aa25.22■■□□□ 1.63
PDLIM4-207ENST00000484620 RUNDC1Q96C34 613 aa25.22■■□□□ 1.63
PDLIM4-207ENST00000484620 THSD7AQ9UPZ6 1657 aa25.22■■□□□ 1.63
PDLIM4-207ENST00000484620 PKD1L3Q7Z443 1732 aa25.21■■□□□ 1.63
PDLIM4-207ENST00000484620 AMOTQ4VCS5 1084 aa25.21■■□□□ 1.63
PDLIM4-207ENST00000484620 PLEKHO1Q53GL0 409 aaPredicted RBP25.21■■□□□ 1.63
PDLIM4-207ENST00000484620 POTEAQ6S8J7 498 aa25.21■■□□□ 1.63
PDLIM4-207ENST00000484620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.21■■□□□ 1.63
PDLIM4-207ENST00000484620 SPG7Q9UQ90 795 aa25.21■■□□□ 1.63
PDLIM4-207ENST00000484620 CCDC146Q8IYE0 955 aa25.2■■□□□ 1.62
PDLIM4-207ENST00000484620 PLEKHF1Q96S99 279 aa25.2■■□□□ 1.62
PDLIM4-207ENST00000484620 ONECUT3O60422 494 aaPredicted RBP25.19■■□□□ 1.62
PDLIM4-207ENST00000484620 LRRC37A3O60309 1634 aa25.19■■□□□ 1.62
PDLIM4-207ENST00000484620 EXOC5O00471 708 aa25.18■■□□□ 1.62
PDLIM4-207ENST00000484620 DDB1Q16531 1140 aa25.18■■□□□ 1.62
PDLIM4-207ENST00000484620 ZCRB1Q8TBF4 217 aaKnown RBP25.18■■□□□ 1.62
PDLIM4-207ENST00000484620 TNS2Q63HR2 1409 aa25.18■■□□□ 1.62
PDLIM4-207ENST00000484620 GAS2L2Q8NHY3 880 aa25.17■■□□□ 1.62
PDLIM4-207ENST00000484620 PHACTR3Q96KR7 559 aa25.16■■□□□ 1.62
PDLIM4-207ENST00000484620 PCDH11XQ9BZA7 1347 aa25.15■■□□□ 1.62
PDLIM4-207ENST00000484620 PCDH11YQ9BZA8 1340 aa25.15■■□□□ 1.62
PDLIM4-207ENST00000484620 SEPT12Q8IYM1 358 aa25.15■■□□□ 1.62
PDLIM4-207ENST00000484620 MTHFSDQ2M296 383 aaKnown RBP25.14■■□□□ 1.62
PDLIM4-207ENST00000484620 SHANK3Q9BYB0 1731 aa25.13■■□□□ 1.61
PDLIM4-207ENST00000484620 ZNF530Q6P9A1 599 aaPredicted RBP25.13■■□□□ 1.61
PDLIM4-207ENST00000484620 C1orf141Q5JVX7 400 aa25.12■■□□□ 1.61
PDLIM4-207ENST00000484620 PDE3BQ13370 1112 aa25.11■■□□□ 1.61
PDLIM4-207ENST00000484620 NFE2L2Q16236 605 aa25.11■■□□□ 1.61
PDLIM4-207ENST00000484620 APAF1O14727 1248 aa25.1■■□□□ 1.61
PDLIM4-207ENST00000484620 IFNL2Q8IZJ0 200 aa25.1■■□□□ 1.61
PDLIM4-207ENST00000484620 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
PDLIM4-207ENST00000484620 RGS12O14924 1447 aa25.1■■□□□ 1.61
PDLIM4-207ENST00000484620 PHKG2P15735 406 aa25.08■■□□□ 1.61
PDLIM4-207ENST00000484620 TMPOP42166 694 aaKnown RBP25.08■■□□□ 1.61
PDLIM4-207ENST00000484620 AKAP4Q5JQC9 854 aa25.08■■□□□ 1.61
PDLIM4-207ENST00000484620 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
PDLIM4-207ENST00000484620 MAP3K5Q99683 1374 aa25.07■■□□□ 1.6
PDLIM4-207ENST00000484620 CYP27B1O15528 508 aa25.07■■□□□ 1.6
PDLIM4-207ENST00000484620 HSP90AB1P08238 724 aaKnown RBP25.07■■□□□ 1.6
PDLIM4-207ENST00000484620 DLG5Q8TDM6 1919 aa25.07■■□□□ 1.6
PDLIM4-207ENST00000484620 GNAT3A8MTJ3 354 aa25.06■■□□□ 1.6
PDLIM4-207ENST00000484620 ILDR2Q71H61 639 aa25.06■■□□□ 1.6
PDLIM4-207ENST00000484620 RIPK4P57078 832 aa25.05■■□□□ 1.6
PDLIM4-207ENST00000484620 LMOD3Q0VAK6 560 aa25.05■■□□□ 1.6
PDLIM4-207ENST00000484620 NEUROD2Q15784 382 aa25.05■■□□□ 1.6
PDLIM4-207ENST00000484620 RRP7AQ9Y3A4 280 aaKnown RBP25.05■■□□□ 1.6
PDLIM4-207ENST00000484620 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
PDLIM4-207ENST00000484620 NGEFQ8N5V2 710 aa25.04■■□□□ 1.6
PDLIM4-207ENST00000484620 RTF1Q92541 710 aaKnown RBP25.04■■□□□ 1.6
PDLIM4-207ENST00000484620 HTATSF1O43719 755 aaKnown RBP25.03■■□□□ 1.6
PDLIM4-207ENST00000484620 MARCH10Q8NA82 808 aaPredicted RBP25.03■■□□□ 1.6
PDLIM4-207ENST00000484620 NCBP3Q53F19 620 aaKnown RBP25.02■■□□□ 1.6
PDLIM4-207ENST00000484620 NKX1-1Q15270 411 aaPredicted RBP25.01■■□□□ 1.59
PDLIM4-207ENST00000484620 DCAF5Q96JK2 942 aa25.01■■□□□ 1.59
PDLIM4-207ENST00000484620 VIRMAQ69YN4 1812 aaKnown RBP25■■□□□ 1.59
PDLIM4-207ENST00000484620 MPRIPQ6WCQ1 1025 aa24.99■■□□□ 1.59
PDLIM4-207ENST00000484620 SCN11AQ9UI33 1791 aa24.99■■□□□ 1.59
PDLIM4-207ENST00000484620 SENP3-EIF4A1A0A087X0R7 540 aa24.98■■□□□ 1.59
PDLIM4-207ENST00000484620 HNRNPUQ00839 825 aaKnown RBP eCLIP24.98■■□□□ 1.59
PDLIM4-207ENST00000484620 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
PDLIM4-207ENST00000484620 KDM6AO15550 1401 aaPredicted RBP24.97■■□□□ 1.59
PDLIM4-207ENST00000484620 CCDC27Q2M243 656 aa24.97■■□□□ 1.59
PDLIM4-207ENST00000484620 BCL9O00512 1426 aa24.96■■□□□ 1.59
PDLIM4-207ENST00000484620 RNMTO43148 476 aaKnown RBP24.96■■□□□ 1.59
PDLIM4-207ENST00000484620 TRIM35Q9UPQ4 493 aa24.96■■□□□ 1.59
PDLIM4-207ENST00000484620 SALL2Q9Y467 1007 aaPredicted RBP24.96■■□□□ 1.59
PDLIM4-207ENST00000484620 DOT1LQ8TEK3 1739 aa24.95■■□□□ 1.59
PDLIM4-207ENST00000484620 FAM196AQ6ZSG2 479 aa24.95■■□□□ 1.58
PDLIM4-207ENST00000484620 MCM10Q7L590 875 aa24.95■■□□□ 1.58
PDLIM4-207ENST00000484620 IL17REQ8NFR9 667 aa24.94■■□□□ 1.58
PDLIM4-207ENST00000484620 TOGARAM1Q9Y4F4 1720 aa24.94■■□□□ 1.58
PDLIM4-207ENST00000484620 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
PDLIM4-207ENST00000484620 ERVV-2B6SEH9 535 aa24.93■■□□□ 1.58
PDLIM4-207ENST00000484620 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
PDLIM4-207ENST00000484620 DCTN1Q14203 1278 aa24.93■■□□□ 1.58
PDLIM4-207ENST00000484620 FAM182BQ5T319 152 aa24.93■■□□□ 1.58
PDLIM4-207ENST00000484620 LGR6Q9HBX8 967 aa24.93■■□□□ 1.58
PDLIM4-207ENST00000484620 TEFQ10587 303 aa24.92■■□□□ 1.58
PDLIM4-207ENST00000484620 WWC1Q8IX03 1113 aa24.92■■□□□ 1.58
PDLIM4-207ENST00000484620 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
PDLIM4-207ENST00000484620 MRC1P22897 1456 aa24.91■■□□□ 1.58
PDLIM4-207ENST00000484620 CABP4P57796 275 aa24.9■■□□□ 1.58
PDLIM4-207ENST00000484620 ITGB4P16144 1822 aa24.9■■□□□ 1.58
PDLIM4-207ENST00000484620 SBF2Q86WG5 1849 aa24.89■■□□□ 1.58
PDLIM4-207ENST00000484620 NHSQ6T4R5 1651 aa24.89■■□□□ 1.58
PDLIM4-207ENST00000484620 THUMPD2Q9BTF0 503 aaKnown RBP24.89■■□□□ 1.58
PDLIM4-207ENST00000484620 SLC52A2Q9HAB3 445 aa24.89■■□□□ 1.58
PDLIM4-207ENST00000484620 SYTL4Q96C24 671 aaPredicted RBP24.88■■□□□ 1.57
PDLIM4-207ENST00000484620 ACSBG1Q96GR2 724 aa24.88■■□□□ 1.57
PDLIM4-207ENST00000484620 TMOD3Q9NYL9 352 aa24.88■■□□□ 1.57
PDLIM4-207ENST00000484620 PRIM1P49642 420 aaKnown RBP24.87■■□□□ 1.57
PDLIM4-207ENST00000484620 WDR63Q8IWG1 891 aa24.87■■□□□ 1.57
PDLIM4-207ENST00000484620 SIPA1L3O60292 1781 aaPredicted RBP24.87■■□□□ 1.57
PDLIM4-207ENST00000484620 YTHDC1Q96MU7 727 aaKnown RBP24.86■■□□□ 1.57
PDLIM4-207ENST00000484620 ZBED9Q6R2W3 1325 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms