RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 TERTO14746 1132 aaKnown RBP12.33□□□□□ -0.44
MDH1-211ENST00000484538 ADH1AP07327 375 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 CCDC125Q86Z20 511 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 PHTF2Q8N3S3 785 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 CYLDQ9NQC7 956 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 DNMT3LQ9UJW3 386 aa12.33□□□□□ -0.44
MDH1-211ENST00000484538 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
MDH1-211ENST00000484538 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
MDH1-211ENST00000484538 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
MDH1-211ENST00000484538 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
MDH1-211ENST00000484538 ATP9BO43861 1147 aa12.31□□□□□ -0.44
MDH1-211ENST00000484538 RELBQ01201 579 aa12.31□□□□□ -0.44
MDH1-211ENST00000484538 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
MDH1-211ENST00000484538 SCTRP47872 440 aa12.3□□□□□ -0.44
MDH1-211ENST00000484538 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
MDH1-211ENST00000484538 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
MDH1-211ENST00000484538 SKIP12755 728 aa12.29□□□□□ -0.44
MDH1-211ENST00000484538 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
MDH1-211ENST00000484538 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
MDH1-211ENST00000484538 TTLL8A6PVC2 850 aa12.28□□□□□ -0.44
MDH1-211ENST00000484538 WFS1O76024 890 aa12.28□□□□□ -0.44
MDH1-211ENST00000484538 PTGIRP43119 386 aa12.28□□□□□ -0.44
MDH1-211ENST00000484538 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
MDH1-211ENST00000484538 ZNF395Q9H8N7 513 aaPredicted RBP12.28□□□□□ -0.44
MDH1-211ENST00000484538 MAFBQ9Y5Q3 323 aaPredicted RBP12.28□□□□□ -0.44
MDH1-211ENST00000484538 MAN1A2O60476 641 aa12.27□□□□□ -0.45
MDH1-211ENST00000484538 CTSOP43234 321 aaPredicted RBP12.27□□□□□ -0.45
MDH1-211ENST00000484538 MAP7D1Q3KQU3 841 aa12.27□□□□□ -0.45
MDH1-211ENST00000484538 PLPP7Q8NBV4 271 aa12.27□□□□□ -0.45
MDH1-211ENST00000484538 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.45
MDH1-211ENST00000484538 PCDHB11Q9Y5F2 797 aa12.27□□□□□ -0.45
MDH1-211ENST00000484538 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
MDH1-211ENST00000484538 NPAS3Q8IXF0 933 aa12.26□□□□□ -0.45
MDH1-211ENST00000484538 USP17L5A8MUK1 530 aa12.25□□□□□ -0.45
MDH1-211ENST00000484538 LZTS3O60299 673 aaPredicted RBP12.25□□□□□ -0.45
MDH1-211ENST00000484538 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
MDH1-211ENST00000484538 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
MDH1-211ENST00000484538 CDCA7Q9BWT1 371 aaPredicted RBP12.25□□□□□ -0.45
MDH1-211ENST00000484538 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
MDH1-211ENST00000484538 DOLKQ9UPQ8 538 aa12.25□□□□□ -0.45
MDH1-211ENST00000484538 H3BM21 787 aa12.24□□□□□ -0.45
MDH1-211ENST00000484538 RFX1P22670 979 aa12.24□□□□□ -0.45
MDH1-211ENST00000484538 USP17L3A6NCW0 530 aa12.23□□□□□ -0.45
MDH1-211ENST00000484538 USP17L4A6NCW7 530 aa12.23□□□□□ -0.45
MDH1-211ENST00000484538 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
MDH1-211ENST00000484538 FOXD4L5Q5VV16 416 aaPredicted RBP12.23□□□□□ -0.45
MDH1-211ENST00000484538 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
MDH1-211ENST00000484538 USP17L1Q7RTZ2 530 aa12.23□□□□□ -0.45
MDH1-211ENST00000484538 RNF217Q8TC41 542 aa12.23□□□□□ -0.45
MDH1-211ENST00000484538 VEGFBP49765 207 aa12.22□□□□□ -0.45
MDH1-211ENST00000484538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.22□□□□□ -0.45
MDH1-211ENST00000484538 TRIM52Q96A61 297 aa12.22□□□□□ -0.45
MDH1-211ENST00000484538 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
MDH1-211ENST00000484538 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.45
MDH1-211ENST00000484538 NCOA4Q13772 614 aa12.2□□□□□ -0.46
MDH1-211ENST00000484538 EML3Q32P44 896 aa12.2□□□□□ -0.46
MDH1-211ENST00000484538 DEPDC4Q8N2C3 294 aa12.2□□□□□ -0.46
MDH1-211ENST00000484538 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
MDH1-211ENST00000484538 POLMQ9NP87 494 aaPredicted RBP12.2□□□□□ -0.46
MDH1-211ENST00000484538 ERBB4Q15303 1308 aa12.18□□□□□ -0.46
MDH1-211ENST00000484538 A0A1W2PRU2 124 aa12.18□□□□□ -0.46
MDH1-211ENST00000484538 PTSQ03393 145 aa12.18□□□□□ -0.46
MDH1-211ENST00000484538 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
MDH1-211ENST00000484538 VRTNQ9H8Y1 702 aa12.18□□□□□ -0.46
MDH1-211ENST00000484538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.17□□□□□ -0.46
MDH1-211ENST00000484538 WIPF1O43516 503 aa12.17□□□□□ -0.46
MDH1-211ENST00000484538 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
MDH1-211ENST00000484538 RNF144AP50876 292 aaPredicted RBP12.17□□□□□ -0.46
MDH1-211ENST00000484538 SRPK2P78362 688 aaKnown RBP12.17□□□□□ -0.46
MDH1-211ENST00000484538 USP4Q13107 963 aa12.17□□□□□ -0.46
MDH1-211ENST00000484538 CYP2U1Q7Z449 544 aa12.17□□□□□ -0.46
MDH1-211ENST00000484538 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
MDH1-211ENST00000484538 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
MDH1-211ENST00000484538 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
MDH1-211ENST00000484538 MKRN1Q9UHC7 482 aaKnown RBP12.16□□□□□ -0.46
MDH1-211ENST00000484538 NOD1Q9Y239 953 aa12.16□□□□□ -0.46
MDH1-211ENST00000484538 SLC35F4A4IF30 521 aa12.15□□□□□ -0.46
MDH1-211ENST00000484538 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
MDH1-211ENST00000484538 MYCP01106 439 aaPredicted RBP12.14□□□□□ -0.47
MDH1-211ENST00000484538 CLN3Q13286 438 aa12.14□□□□□ -0.47
MDH1-211ENST00000484538 ACIN1Q9UKV3 1341 aaKnown RBP12.13□□□□□ -0.47
MDH1-211ENST00000484538 SENP3-EIF4A1A0A087X0R7 540 aa12.13□□□□□ -0.47
MDH1-211ENST00000484538 GPC1P35052 558 aa12.13□□□□□ -0.47
MDH1-211ENST00000484538 TRIM50Q86XT4 487 aa12.13□□□□□ -0.47
MDH1-211ENST00000484538 ARXQ96QS3 562 aa12.13□□□□□ -0.47
MDH1-211ENST00000484538 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
MDH1-211ENST00000484538 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
MDH1-211ENST00000484538 GNRH1P01148 92 aa12.12□□□□□ -0.47
MDH1-211ENST00000484538 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
MDH1-211ENST00000484538 IRF7Q92985 503 aa12.12□□□□□ -0.47
MDH1-211ENST00000484538 HRH3Q9Y5N1 445 aa12.12□□□□□ -0.47
MDH1-211ENST00000484538 MEN1O00255 615 aa12.11□□□□□ -0.47
MDH1-211ENST00000484538 IL2RAP01589 272 aa12.11□□□□□ -0.47
MDH1-211ENST00000484538 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
MDH1-211ENST00000484538 RASA1P20936 1047 aa12.1□□□□□ -0.47
MDH1-211ENST00000484538 GMPRP36959 345 aa12.1□□□□□ -0.47
MDH1-211ENST00000484538 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
MDH1-211ENST00000484538 LYSMD3Q7Z3D4 306 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms