RNA–Protein interactions for RNA: ENST00000484389.6

TDRD3-207, Transcript of tudor domain containing 3, humanhuman

TSL 2

Gene TDRD3, Length 1,863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-207ENST00000484389 PPP1R12AO14974 1030 aaPredicted RBP6.7□□□□□ -1.34
TDRD3-207ENST00000484389 BRD1O95696 1058 aa6.7□□□□□ -1.34
TDRD3-207ENST00000484389 SLFN14P0C7P3 912 aa6.7□□□□□ -1.34
TDRD3-207ENST00000484389 CALRP27797 417 aaKnown RBP6.7□□□□□ -1.34
TDRD3-207ENST00000484389 ARSIQ5FYB1 569 aa6.7□□□□□ -1.34
TDRD3-207ENST00000484389 C1QTNF12Q5T7M4 302 aa6.7□□□□□ -1.34
TDRD3-207ENST00000484389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.7□□□□□ -1.34
TDRD3-207ENST00000484389 TATDN2Q93075 761 aa6.7□□□□□ -1.34
TDRD3-207ENST00000484389 NOL10Q9BSC4 688 aaKnown RBP6.7□□□□□ -1.34
TDRD3-207ENST00000484389 TSKSQ9UJT2 592 aa6.7□□□□□ -1.34
TDRD3-207ENST00000484389 PPP1R3GB7ZBB8 358 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 COQ9O75208 318 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 COL9A1P20849 921 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 PTPREP23469 700 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
TDRD3-207ENST00000484389 KCNA1Q09470 495 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 CCDC173Q0VFZ6 552 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 PNISRQ8TF01 805 aaKnown RBP6.69□□□□□ -1.34
TDRD3-207ENST00000484389 PPP1R9BQ96SB3 815 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 PAIP2Q9BPZ3 127 aaKnown RBP6.69□□□□□ -1.34
TDRD3-207ENST00000484389 NBPF3Q9H094 633 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 TMX1Q9H3N1 280 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 ZSWIM6Q9HCJ5 1215 aa6.69□□□□□ -1.34
TDRD3-207ENST00000484389 WRNQ14191 1432 aaPredicted RBP eCLIP6.69□□□□□ -1.34
TDRD3-207ENST00000484389 GOLGA6CA6NDK9 693 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 GOLGA6BA6NDN3 693 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 GOLGA6DP0CG33 693 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 FDX1P10109 184 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 RBM5P52756 815 aaKnown RBP eCLIP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 CCT2P78371 535 aaKnown RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 MYBPC2Q14324 1141 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 HELBQ8NG08 1087 aaPredicted RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 TNPO1Q92973 898 aaKnown RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 TRERF1Q96PN7 1200 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 BCL2L12Q9HB09 334 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 GOLGA6AQ9NYA3 693 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 JMYQ8N9B5 988 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 MYRIPQ8NFW9 859 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 KHSRPQ92945 711 aaKnown RBP eCLIP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 MKL1Q969V6 931 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 CXorf56Q9H5V9 222 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 PANK3Q9H999 370 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 UPF2Q9HAU5 1272 aaKnown RBP6.68□□□□□ -1.34
TDRD3-207ENST00000484389 TOMM22Q9NS69 142 aa6.68□□□□□ -1.34
TDRD3-207ENST00000484389 IGF1RP08069 1367 aa6.67□□□□□ -1.34
TDRD3-207ENST00000484389 C11orf91Q3C1V1 193 aa6.67□□□□□ -1.34
TDRD3-207ENST00000484389 DDX46Q7L014 1031 aaKnown RBP6.67□□□□□ -1.34
TDRD3-207ENST00000484389 PPP1R12CQ9BZL4 782 aa6.67□□□□□ -1.34
TDRD3-207ENST00000484389 HOXA2O43364 376 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 SWT1Q5T5J6 900 aaKnown RBP6.66□□□□□ -1.34
TDRD3-207ENST00000484389 PDCL2Q8N4E4 241 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 MSL3Q8N5Y2 521 aaKnown RBP6.66□□□□□ -1.34
TDRD3-207ENST00000484389 TSC1Q92574 1164 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 RASSF4Q9H2L5 321 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 OGFRQ9NZT2 677 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 RNF123Q5XPI4 1314 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 PRDM2Q13029 1718 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 CTAGE5O15320 804 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 IPO7O95373 1038 aaKnown RBP6.66□□□□□ -1.34
TDRD3-207ENST00000484389 LIG1P18858 919 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 GCGRP47871 477 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 CTDSPL2Q05D32 466 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 CFAP70Q5T0N1 1121 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 ATL2Q8NHH9 583 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 FEZ1Q99689 392 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 SMC3Q9UQE7 1217 aa6.66□□□□□ -1.34
TDRD3-207ENST00000484389 VAC14Q08AM6 782 aa6.65□□□□□ -1.34
TDRD3-207ENST00000484389 MTMR2Q13614 643 aa6.65□□□□□ -1.34
TDRD3-207ENST00000484389 SF3A1Q15459 793 aaKnown RBP6.65□□□□□ -1.34
TDRD3-207ENST00000484389 HS1BP3Q53T59 392 aa6.65□□□□□ -1.34
TDRD3-207ENST00000484389 SDR16C5Q8N3Y7 309 aa6.65□□□□□ -1.34
TDRD3-207ENST00000484389 ADAMTS19Q8TE59 1207 aa6.65□□□□□ -1.34
TDRD3-207ENST00000484389 LHX6Q9UPM6 363 aa6.65□□□□□ -1.34
TDRD3-207ENST00000484389 RAD50Q92878 1312 aa6.65□□□□□ -1.35
TDRD3-207ENST00000484389 TPM3P06753 285 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 PAX7P23759 505 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 U2AF2P26368 475 aaKnown RBP eCLIP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 LMOD1P29536 600 aaPredicted RBP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 GTF2F1P35269 517 aaKnown RBP eCLIP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 SOX11P35716 441 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 RAD51AP2Q09MP3 1159 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 PPP2R5AQ15172 486 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 TERF2Q15554 542 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 ZRSR2Q15696 482 aaKnown RBP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 NUTM2GQ5VZR2 741 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 NOL7Q9UMY1 257 aaKnown RBP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 KNSTRNQ9Y448 316 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 DHX57Q6P158 1386 aaKnown RBP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 H0YHG0 523 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 SSFA2P28290 1259 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 SARNPP82979 210 aaKnown RBP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 GPR153Q6NV75 609 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 CCDC91Q7Z6B0 441 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 RPAINQ86UA6 219 aa6.64□□□□□ -1.35
TDRD3-207ENST00000484389 JARID2Q92833 1246 aaPredicted RBP6.64□□□□□ -1.35
TDRD3-207ENST00000484389 NUCKS1Q9H1E3 243 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms