RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
NCL-209ENST00000484328 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
NCL-209ENST00000484328 SULT6B1Q6IMI4 303 aa8.59□□□□□ -1.03
NCL-209ENST00000484328 USHBP1Q8N6Y0 703 aa8.59□□□□□ -1.03
NCL-209ENST00000484328 DOT1LQ8TEK3 1739 aa8.59□□□□□ -1.03
NCL-209ENST00000484328 FCHSD2O94868 740 aa8.58□□□□□ -1.04
NCL-209ENST00000484328 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
NCL-209ENST00000484328 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.04
NCL-209ENST00000484328 PLEKHF1Q96S99 279 aa8.58□□□□□ -1.04
NCL-209ENST00000484328 CDCA7Q9BWT1 371 aaPredicted RBP8.58□□□□□ -1.04
NCL-209ENST00000484328 NHSQ6T4R5 1651 aa8.58□□□□□ -1.04
NCL-209ENST00000484328 MRC1P22897 1456 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 SBF2Q86WG5 1849 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 BCL9O00512 1426 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 HMOX1P09601 288 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 IL2RBP14784 551 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 RBM6P78332 1123 aaKnown RBP8.57□□□□□ -1.04
NCL-209ENST00000484328 WDR43Q15061 677 aaKnown RBP eCLIP8.57□□□□□ -1.04
NCL-209ENST00000484328 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
NCL-209ENST00000484328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.042e-26■■■■□ 21
NCL-209ENST00000484328 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
NCL-209ENST00000484328 PRKAR2BP31323 418 aa8.56□□□□□ -1.04
NCL-209ENST00000484328 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
NCL-209ENST00000484328 RAPGEF4Q8WZA2 1011 aa8.56□□□□□ -1.04
NCL-209ENST00000484328 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
NCL-209ENST00000484328 TNS1Q9HBL0 1735 aaKnown RBP8.55□□□□□ -1.04
NCL-209ENST00000484328 ITGB4P16144 1822 aa8.55□□□□□ -1.04
NCL-209ENST00000484328 TATP17735 454 aaPredicted RBP8.55□□□□□ -1.04
NCL-209ENST00000484328 USP35Q9P2H5 1018 aa8.55□□□□□ -1.04
NCL-209ENST00000484328 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 KDM6AO15550 1401 aaPredicted RBP8.54□□□□□ -1.04
NCL-209ENST00000484328 KDM3BQ7LBC6 1761 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 RXRBP28702 533 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 AMOTQ4VCS5 1084 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
NCL-209ENST00000484328 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
NCL-209ENST00000484328 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
NCL-209ENST00000484328 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
NCL-209ENST00000484328 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
NCL-209ENST00000484328 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
NCL-209ENST00000484328 MAP3K5Q99683 1374 aa8.53□□□□□ -1.04
NCL-209ENST00000484328 MTHFSDQ2M296 383 aaKnown RBP8.53□□□□□ -1.04
NCL-209ENST00000484328 NCBP3Q53F19 620 aaKnown RBP8.53□□□□□ -1.04
NCL-209ENST00000484328 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
NCL-209ENST00000484328 MAPK8IP3Q9UPT6 1336 aa8.53□□□□□ -1.04
NCL-209ENST00000484328 CEMIPQ8WUJ3 1361 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 CYP27B1O15528 508 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 PHKG2P15735 406 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 NKX1-1Q15270 411 aaPredicted RBP8.52□□□□□ -1.05
NCL-209ENST00000484328 DDB1Q16531 1140 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 PLEKHO1Q53GL0 409 aaPredicted RBP8.52□□□□□ -1.05
NCL-209ENST00000484328 SEPT12Q8IYM1 358 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 FAM9BQ8IZU0 186 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 GAS2L2Q8NHY3 880 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 BTAF1O14981 1849 aa8.52□□□□□ -1.05
NCL-209ENST00000484328 ZNF831Q5JPB2 1677 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 EXOC5O00471 708 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 NFE2L2Q16236 605 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 CCDC146Q8IYE0 955 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 MARCH10Q8NA82 808 aaPredicted RBP8.51□□□□□ -1.05
NCL-209ENST00000484328 RNF39Q9H2S5 420 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 LY75O60449 1722 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 EP400Q96L91 3159 aa8.51□□□□□ -1.05
NCL-209ENST00000484328 HTATSF1O43719 755 aaKnown RBP8.5□□□□□ -1.05
NCL-209ENST00000484328 TMPOP42166 694 aaKnown RBP8.5□□□□□ -1.05
NCL-209ENST00000484328 CCDC27Q2M243 656 aa8.5□□□□□ -1.05
NCL-209ENST00000484328 ZNF530Q6P9A1 599 aaPredicted RBP8.5□□□□□ -1.05
NCL-209ENST00000484328 IFNL2Q8IZJ0 200 aa8.5□□□□□ -1.05
NCL-209ENST00000484328 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
NCL-209ENST00000484328 APAF1O14727 1248 aa8.49□□□□□ -1.05
NCL-209ENST00000484328 NEFMP07197 916 aa8.49□□□□□ -1.05
NCL-209ENST00000484328 NGEFQ8N5V2 710 aa8.49□□□□□ -1.05
NCL-209ENST00000484328 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
NCL-209ENST00000484328 ZNF521Q96K83 1311 aa8.49□□□□□ -1.05
NCL-209ENST00000484328 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 HSP90AB1P08238 724 aaKnown RBP8.48□□□□□ -1.05
NCL-209ENST00000484328 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 C1orf141Q5JVX7 400 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 KRT27Q7Z3Y8 459 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 TJP1Q07157 1748 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
NCL-209ENST00000484328 RREB1Q92766 1687 aa8.47□□□□□ -1.05
NCL-209ENST00000484328 COL5A3P25940 1745 aaPredicted RBP8.47□□□□□ -1.05
NCL-209ENST00000484328 A0A0G2JS52 829 aa8.47□□□□□ -1.05
NCL-209ENST00000484328 MYT1Q01538 1121 aa8.47□□□□□ -1.05
NCL-209ENST00000484328 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
NCL-209ENST00000484328 IL17REQ8NFR9 667 aa8.47□□□□□ -1.05
NCL-209ENST00000484328 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
NCL-209ENST00000484328 RRP7AQ9Y3A4 280 aaKnown RBP8.47□□□□□ -1.05
NCL-209ENST00000484328 C5P01031 1676 aa8.46□□□□□ -1.05
NCL-209ENST00000484328 ERVV-2B6SEH9 535 aa8.46□□□□□ -1.06
NCL-209ENST00000484328 RNMTO43148 476 aaKnown RBP8.46□□□□□ -1.06
NCL-209ENST00000484328 RIPK4P57078 832 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms