RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 SYCE3A1L190 88 aa24.25■■□□□ 1.47
RPUSD3-216ENST00000484134 IL13P35225 146 aa24.25■■□□□ 1.47
RPUSD3-216ENST00000484134 ZKSCAN5Q9Y2L8 839 aa24.25■■□□□ 1.47
RPUSD3-216ENST00000484134 ST18O60284 1047 aa24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 DCTN1Q14203 1278 aa24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 FOXD4L5Q5VV16 416 aaPredicted RBP24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 LRSAM1Q6UWE0 723 aa24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 FOXD4L4Q8WXT5 416 aaPredicted RBP24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 POGZQ7Z3K3 1410 aa24.24■■□□□ 1.47
RPUSD3-216ENST00000484134 MLH3Q9UHC1 1453 aa24.23■■□□□ 1.47
RPUSD3-216ENST00000484134 KIF24Q5T7B8 1368 aa24.23■■□□□ 1.47
RPUSD3-216ENST00000484134 CEP85Q6P2H3 762 aa24.22■■□□□ 1.47
RPUSD3-216ENST00000484134 ARHGEF40Q8TER5 1519 aa24.22■■□□□ 1.47
RPUSD3-216ENST00000484134 DLG5Q8TDM6 1919 aa24.21■■□□□ 1.47
RPUSD3-216ENST00000484134 UQCRHLA0A096LP55 91 aa24.21■■□□□ 1.47
RPUSD3-216ENST00000484134 UQCRHP07919 91 aa24.21■■□□□ 1.47
RPUSD3-216ENST00000484134 MYO5BQ9ULV0 1848 aa24.2■■□□□ 1.47
RPUSD3-216ENST00000484134 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
RPUSD3-216ENST00000484134 RGS12O14924 1447 aa24.19■■□□□ 1.46
RPUSD3-216ENST00000484134 RNF214Q8ND24 703 aa24.19■■□□□ 1.46
RPUSD3-216ENST00000484134 ZRANB1Q9UGI0 708 aa24.19■■□□□ 1.46
RPUSD3-216ENST00000484134 RPAP2Q8IXW5 612 aaPredicted RBP24.18■■□□□ 1.46
RPUSD3-216ENST00000484134 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
RPUSD3-216ENST00000484134 CASC1Q6TDU7 716 aa24.17■■□□□ 1.46
RPUSD3-216ENST00000484134 REC8O95072 547 aa24.17■■□□□ 1.46
RPUSD3-216ENST00000484134 ERC2O15083 957 aa24.16■■□□□ 1.46
RPUSD3-216ENST00000484134 MEIS3Q99687 375 aa24.16■■□□□ 1.46
RPUSD3-216ENST00000484134 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
RPUSD3-216ENST00000484134 TMX3Q96JJ7 454 aa24.16■■□□□ 1.46
RPUSD3-216ENST00000484134 MCM5P33992 734 aa24.15■■□□□ 1.46
RPUSD3-216ENST00000484134 NME9Q86XW9 330 aa24.15■■□□□ 1.46
RPUSD3-216ENST00000484134 NEK4P51957 841 aa24.14■■□□□ 1.45
RPUSD3-216ENST00000484134 SLC52A1Q9NWF4 448 aa24.14■■□□□ 1.45
RPUSD3-216ENST00000484134 CCDC39Q9UFE4 941 aa24.14■■□□□ 1.45
RPUSD3-216ENST00000484134 MSH6P52701 1360 aa24.14■■□□□ 1.45
RPUSD3-216ENST00000484134 LMOD3Q0VAK6 560 aa24.13■■□□□ 1.45
RPUSD3-216ENST00000484134 CSPP1Q1MSJ5 1256 aa24.12■■□□□ 1.45
RPUSD3-216ENST00000484134 WAPLQ7Z5K2 1190 aa24.12■■□□□ 1.45
RPUSD3-216ENST00000484134 RAPGEF3O95398 923 aa24.12■■□□□ 1.45
RPUSD3-216ENST00000484134 BRD1O95696 1058 aa24.12■■□□□ 1.45
RPUSD3-216ENST00000484134 MAP7D2Q96T17 732 aa24.12■■□□□ 1.45
RPUSD3-216ENST00000484134 RRS1Q15050 365 aaKnown RBP24.11■■□□□ 1.45
RPUSD3-216ENST00000484134 MBD3O95983 291 aa24.1■■□□□ 1.45
RPUSD3-216ENST00000484134 TMEM131LA2VDJ0 1609 aa24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 DYNC1I1O14576 645 aa24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 PRDM4Q9UKN5 801 aa24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 PDE1AP54750 535 aa24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 TSHZ3Q63HK5 1081 aa24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 CPSF1Q10570 1443 aaKnown RBP24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 CDK12Q9NYV4 1490 aaPredicted RBP24.09■■□□□ 1.45
RPUSD3-216ENST00000484134 SASS6Q6UVJ0 657 aa24.08■■□□□ 1.45
RPUSD3-216ENST00000484134 PALD1Q9ULE6 856 aa24.08■■□□□ 1.45
RPUSD3-216ENST00000484134 ARID3AQ99856 593 aa24.08■■□□□ 1.45
RPUSD3-216ENST00000484134 ALKQ9UM73 1620 aa24.08■■□□□ 1.45
RPUSD3-216ENST00000484134 CUL4AQ13619 759 aa24.07■■□□□ 1.44
RPUSD3-216ENST00000484134 ATP7BP35670 1465 aa24.07■■□□□ 1.44
RPUSD3-216ENST00000484134 TSPY26PQ9H489 355 aa24.07■■□□□ 1.44
RPUSD3-216ENST00000484134 OSBPL3Q9H4L5 887 aa24.07■■□□□ 1.44
RPUSD3-216ENST00000484134 NOL8Q76FK4 1167 aaKnown RBP24.06■■□□□ 1.44
RPUSD3-216ENST00000484134 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.06■■□□□ 1.44
RPUSD3-216ENST00000484134 AEBP1Q8IUX7 1158 aa24.06■■□□□ 1.44
RPUSD3-216ENST00000484134 GADD45BO75293 160 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-216ENST00000484134 FOXD4L6Q3SYB3 417 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-216ENST00000484134 FOXD4L3Q6VB84 417 aaPredicted RBP24.05■■□□□ 1.44
RPUSD3-216ENST00000484134 CHL1O00533 1208 aa24.05■■□□□ 1.44
RPUSD3-216ENST00000484134 MPNDQ8N594 471 aa24.05■■□□□ 1.44
RPUSD3-216ENST00000484134 GDPD2Q9HCC8 539 aa24.05■■□□□ 1.44
RPUSD3-216ENST00000484134 MCM10Q7L590 875 aa24.04■■□□□ 1.44
RPUSD3-216ENST00000484134 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
RPUSD3-216ENST00000484134 JARID2Q92833 1246 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-216ENST00000484134 ESYT1Q9BSJ8 1104 aa24.03■■□□□ 1.44
RPUSD3-216ENST00000484134 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-216ENST00000484134 AATKQ6ZMQ8 1374 aa24.02■■□□□ 1.44
RPUSD3-216ENST00000484134 PTMAP06454 111 aaKnown RBP24.02■■□□□ 1.44
RPUSD3-216ENST00000484134 PTPRCP08575 1304 aa24.02■■□□□ 1.44
RPUSD3-216ENST00000484134 EDC4Q6P2E9 1401 aaKnown RBP24.01■■□□□ 1.43
RPUSD3-216ENST00000484134 NCKAP5LQ9HCH0 1330 aa24.01■■□□□ 1.43
RPUSD3-216ENST00000484134 SLC4A2P04920 1241 aa24.01■■□□□ 1.43
RPUSD3-216ENST00000484134 MCM2P49736 904 aa24.01■■□□□ 1.43
RPUSD3-216ENST00000484134 EXOC6BQ9Y2D4 811 aa24.01■■□□□ 1.43
RPUSD3-216ENST00000484134 F6X3S4 739 aa24■■□□□ 1.43
RPUSD3-216ENST00000484134 KIAA2012Q0VF49 1180 aa24■■□□□ 1.43
RPUSD3-216ENST00000484134 ABCF1Q8NE71 845 aaKnown RBP eCLIP24■■□□□ 1.43
RPUSD3-216ENST00000484134 ZNF830Q96NB3 372 aaPredicted RBP24■■□□□ 1.43
RPUSD3-216ENST00000484134 SALL3Q9BXA9 1300 aa24■■□□□ 1.43
RPUSD3-216ENST00000484134 G2E3Q7L622 706 aa24■■□□□ 1.43
RPUSD3-216ENST00000484134 INTS4Q96HW7 963 aaKnown RBP24■■□□□ 1.43
RPUSD3-216ENST00000484134 DIP2CQ9Y2E4 1556 aa24■■□□□ 1.43
RPUSD3-216ENST00000484134 USP48Q86UV5 1035 aa23.99■■□□□ 1.43
RPUSD3-216ENST00000484134 HMMRO75330 724 aa23.99■■□□□ 1.43
RPUSD3-216ENST00000484134 CPS1P31327 1500 aa23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 SULT6B1Q6IMI4 303 aa23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 COG3Q96JB2 828 aa23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 UPF3BQ9BZI7 483 aaKnown RBP23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 PREX1Q8TCU6 1659 aa23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 SLC4A10Q6U841 1118 aa23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 MTERF4Q7Z6M4 381 aaKnown RBP23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 TSC1Q92574 1164 aa23.98■■□□□ 1.43
RPUSD3-216ENST00000484134 MIS18AQ9NYP9 233 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms