RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
FXR1-217ENST00000484042 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
FXR1-217ENST00000484042 SLFNL1Q499Z3 407 aa10.07□□□□□ -0.8
FXR1-217ENST00000484042 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
FXR1-217ENST00000484042 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
FXR1-217ENST00000484042 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
FXR1-217ENST00000484042 CCDC116Q8IYX3 515 aa10.06□□□□□ -0.8
FXR1-217ENST00000484042 DHX9Q08211 1270 aaKnown RBP10.05□□□□□ -0.8
FXR1-217ENST00000484042 SERPINA10Q9UK55 444 aa10.05□□□□□ -0.8
FXR1-217ENST00000484042 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
FXR1-217ENST00000484042 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
FXR1-217ENST00000484042 CCDC85AQ96PX6 553 aaPredicted RBP10.04□□□□□ -0.8
FXR1-217ENST00000484042 PPP1R12CQ9BZL4 782 aa10.04□□□□□ -0.8
FXR1-217ENST00000484042 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
FXR1-217ENST00000484042 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
FXR1-217ENST00000484042 ATP9BO43861 1147 aa10.03□□□□□ -0.8
FXR1-217ENST00000484042 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.03□□□□□ -0.8
FXR1-217ENST00000484042 TBC1D9Q6ZT07 1266 aa10.03□□□□□ -0.8
FXR1-217ENST00000484042 CCDC82Q8N4S0 544 aa10.03□□□□□ -0.8
FXR1-217ENST00000484042 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
FXR1-217ENST00000484042 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.81
FXR1-217ENST00000484042 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.81
FXR1-217ENST00000484042 KRT76Q01546 638 aa10.02□□□□□ -0.81
FXR1-217ENST00000484042 CBLBQ13191 982 aa10.02□□□□□ -0.81
FXR1-217ENST00000484042 PPP1R26Q5T8A7 1209 aaPredicted RBP10.02□□□□□ -0.81
FXR1-217ENST00000484042 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
FXR1-217ENST00000484042 LZTS3O60299 673 aaPredicted RBP10.01□□□□□ -0.81
FXR1-217ENST00000484042 PTSQ03393 145 aa10.01□□□□□ -0.81
FXR1-217ENST00000484042 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
FXR1-217ENST00000484042 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
FXR1-217ENST00000484042 SKIP12755 728 aa10□□□□□ -0.81
FXR1-217ENST00000484042 GSK3AP49840 483 aa10□□□□□ -0.81
FXR1-217ENST00000484042 RAB15P59190 212 aa10□□□□□ -0.81
FXR1-217ENST00000484042 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
FXR1-217ENST00000484042 CFAP70Q5T0N1 1121 aa10□□□□□ -0.81
FXR1-217ENST00000484042 Q6ZVU0 165 aa10□□□□□ -0.81
FXR1-217ENST00000484042 TRIM52Q96A61 297 aa10□□□□□ -0.81
FXR1-217ENST00000484042 TFIP11Q9UBB9 837 aaKnown RBP10□□□□□ -0.81
FXR1-217ENST00000484042 PCDHB11Q9Y5F2 797 aa10□□□□□ -0.81
FXR1-217ENST00000484042 MAFBQ9Y5Q3 323 aaPredicted RBP10□□□□□ -0.81
FXR1-217ENST00000484042 USP17L5A8MUK1 530 aa9.99□□□□□ -0.81
FXR1-217ENST00000484042 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
FXR1-217ENST00000484042 KCNMA1Q12791 1236 aa9.99□□□□□ -0.81
FXR1-217ENST00000484042 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
FXR1-217ENST00000484042 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
FXR1-217ENST00000484042 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
FXR1-217ENST00000484042 SPINT1O43278 529 aa9.98□□□□□ -0.81
FXR1-217ENST00000484042 ZNF784Q8NCA9 323 aaPredicted RBP9.98□□□□□ -0.81
FXR1-217ENST00000484042 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
FXR1-217ENST00000484042 LILRA1O75019 489 aa9.97□□□□□ -0.81
FXR1-217ENST00000484042 CDCA7Q9BWT1 371 aaPredicted RBP9.97□□□□□ -0.81
FXR1-217ENST00000484042 USP17L3A6NCW0 530 aa9.96□□□□□ -0.82
FXR1-217ENST00000484042 USP17L4A6NCW7 530 aa9.96□□□□□ -0.82
FXR1-217ENST00000484042 CC2D2BQ6DHV5 1058 aa9.96□□□□□ -0.82
FXR1-217ENST00000484042 USP17L2Q6R6M4 530 aa9.96□□□□□ -0.82
FXR1-217ENST00000484042 USP17L1Q7RTZ2 530 aa9.96□□□□□ -0.82
FXR1-217ENST00000484042 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
FXR1-217ENST00000484042 NANOS1Q8WY41 292 aaKnown RBP9.96□□□□□ -0.82
FXR1-217ENST00000484042 LOC100996750A0A140TA64 210 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 SCTRP47872 440 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 USP4Q13107 963 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 NCOA4Q13772 614 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 EML3Q32P44 896 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
FXR1-217ENST00000484042 KRTAP4-6Q9BYQ5 205 aa9.95□□□□□ -0.82
FXR1-217ENST00000484042 SLC35F4A4IF30 521 aa9.94□□□□□ -0.82
FXR1-217ENST00000484042 LMOD1P29536 600 aaPredicted RBP9.94□□□□□ -0.82
FXR1-217ENST00000484042 KCTD17Q8N5Z5 321 aa9.94□□□□□ -0.82
FXR1-217ENST00000484042 CYLDQ9NQC7 956 aa9.94□□□□□ -0.82
FXR1-217ENST00000484042 OXLD1Q5BKU9 147 aa9.93□□□□□ -0.82
FXR1-217ENST00000484042 DEPDC4Q8N2C3 294 aa9.93□□□□□ -0.82
FXR1-217ENST00000484042 AGBL1Q96MI9 1066 aa9.93□□□□□ -0.82
FXR1-217ENST00000484042 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
FXR1-217ENST00000484042 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
FXR1-217ENST00000484042 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
FXR1-217ENST00000484042 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
FXR1-217ENST00000484042 RNFT1Q5M7Z0 435 aa9.92□□□□□ -0.82
FXR1-217ENST00000484042 OSBPL3Q9H4L5 887 aa9.92□□□□□ -0.82
FXR1-217ENST00000484042 ADD1P35611 737 aaKnown RBP9.91□□□□□ -0.82
FXR1-217ENST00000484042 KANK4Q5T7N3 995 aaPredicted RBP9.91□□□□□ -0.82
FXR1-217ENST00000484042 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
FXR1-217ENST00000484042 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
FXR1-217ENST00000484042 RELBQ01201 579 aa9.9□□□□□ -0.82
FXR1-217ENST00000484042 RASSF7Q02833 373 aa9.9□□□□□ -0.82
FXR1-217ENST00000484042 VWA5B2Q8N398 1253 aa9.9□□□□□ -0.82
FXR1-217ENST00000484042 TMEM151AQ8N4L1 468 aa9.9□□□□□ -0.82
FXR1-217ENST00000484042 INSM2Q96T92 566 aaPredicted RBP9.9□□□□□ -0.82
FXR1-217ENST00000484042 MKRN1Q9UHC7 482 aaKnown RBP9.9□□□□□ -0.82
FXR1-217ENST00000484042 ADH1AP07327 375 aa9.89□□□□□ -0.83
FXR1-217ENST00000484042 ITGA6P23229 1130 aa9.89□□□□□ -0.83
FXR1-217ENST00000484042 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
FXR1-217ENST00000484042 ZNF385CQ66K41 422 aaPredicted RBP9.89□□□□□ -0.83
FXR1-217ENST00000484042 CYP2U1Q7Z449 544 aa9.89□□□□□ -0.83
FXR1-217ENST00000484042 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
FXR1-217ENST00000484042 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
FXR1-217ENST00000484042 GDF11O95390 407 aa9.88□□□□□ -0.83
FXR1-217ENST00000484042 KDF1Q8NAX2 398 aaPredicted RBP9.88□□□□□ -0.83
FXR1-217ENST00000484042 ZNF395Q9H8N7 513 aaPredicted RBP9.88□□□□□ -0.83
FXR1-217ENST00000484042 VRTNQ9H8Y1 702 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms