RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
MSL3-216ENST00000483645 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
MSL3-216ENST00000483645 ALG2Q9H553 416 aa8.66□□□□□ -1.02
MSL3-216ENST00000483645 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
MSL3-216ENST00000483645 FIGNL2A6NMB9 653 aa8.65□□□□□ -1.02
MSL3-216ENST00000483645 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
MSL3-216ENST00000483645 MEN1O00255 615 aa8.65□□□□□ -1.02
MSL3-216ENST00000483645 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
MSL3-216ENST00000483645 PLPP7Q8NBV4 271 aa8.65□□□□□ -1.02
MSL3-216ENST00000483645 CDCA7Q9BWT1 371 aaPredicted RBP8.65□□□□□ -1.02
MSL3-216ENST00000483645 DNMT3LQ9UJW3 386 aa8.65□□□□□ -1.02
MSL3-216ENST00000483645 A6NJR5 290 aa8.64□□□□□ -1.03
MSL3-216ENST00000483645 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
MSL3-216ENST00000483645 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
MSL3-216ENST00000483645 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
MSL3-216ENST00000483645 A0A1W2PRU2 124 aa8.63□□□□□ -1.03
MSL3-216ENST00000483645 TRAK2O60296 914 aa8.63□□□□□ -1.03
MSL3-216ENST00000483645 WFS1O76024 890 aa8.63□□□□□ -1.03
MSL3-216ENST00000483645 GNRH1P01148 92 aa8.63□□□□□ -1.03
MSL3-216ENST00000483645 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 SKIP12755 728 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 TREML4Q6UXN2 200 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
MSL3-216ENST00000483645 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 ARHGEF10LQ9HCE6 1279 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
MSL3-216ENST00000483645 LZTS3O60299 673 aaPredicted RBP8.61□□□□□ -1.03
MSL3-216ENST00000483645 GPC1P35052 558 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 EML3Q32P44 896 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 TSGA10IPQ3SY00 556 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 ESCO1Q5FWF5 840 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 LYSMD3Q7Z3D4 306 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
MSL3-216ENST00000483645 GTF2E1P29083 439 aaPredicted RBP8.6□□□□□ -1.03
MSL3-216ENST00000483645 RNF144AP50876 292 aaPredicted RBP8.6□□□□□ -1.03
MSL3-216ENST00000483645 CLN3Q13286 438 aa8.6□□□□□ -1.03
MSL3-216ENST00000483645 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
MSL3-216ENST00000483645 PIK3CDO00329 1044 aa8.59□□□□□ -1.03
MSL3-216ENST00000483645 FOXD4L5Q5VV16 416 aaPredicted RBP8.59□□□□□ -1.03
MSL3-216ENST00000483645 RAB6BQ9NRW1 208 aa8.59□□□□□ -1.03
MSL3-216ENST00000483645 GTF3C3Q9Y5Q9 886 aa8.59□□□□□ -1.03
MSL3-216ENST00000483645 PTSQ03393 145 aa8.58□□□□□ -1.04
MSL3-216ENST00000483645 NFX1Q12986 1120 aaKnown RBP8.58□□□□□ -1.04
MSL3-216ENST00000483645 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
MSL3-216ENST00000483645 IRF7Q92985 503 aa8.58□□□□□ -1.04
MSL3-216ENST00000483645 GLMNQ92990 594 aa8.58□□□□□ -1.04
MSL3-216ENST00000483645 CNKSR1Q969H4 720 aa8.58□□□□□ -1.04
MSL3-216ENST00000483645 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
MSL3-216ENST00000483645 NOD1Q9Y239 953 aa8.58□□□□□ -1.04
MSL3-216ENST00000483645 USP17L5A8MUK1 530 aa8.57□□□□□ -1.04
MSL3-216ENST00000483645 H3BM21 787 aa8.57□□□□□ -1.04
MSL3-216ENST00000483645 VEGFBP49765 207 aa8.57□□□□□ -1.04
MSL3-216ENST00000483645 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
MSL3-216ENST00000483645 ADAMTS19Q8TE59 1207 aa8.56□□□□□ -1.04
MSL3-216ENST00000483645 PPFIA3O75145 1194 aa8.55□□□□□ -1.04
MSL3-216ENST00000483645 PSME1Q06323 249 aa8.55□□□□□ -1.04
MSL3-216ENST00000483645 NCOA4Q13772 614 aa8.55□□□□□ -1.04
MSL3-216ENST00000483645 CCDC155Q8N6L0 562 aa8.55□□□□□ -1.04
MSL3-216ENST00000483645 ATP9BO43861 1147 aa8.54□□□□□ -1.04
MSL3-216ENST00000483645 IL2RAP01589 272 aa8.54□□□□□ -1.04
MSL3-216ENST00000483645 TRIM50Q86XT4 487 aa8.54□□□□□ -1.04
MSL3-216ENST00000483645 XAGE2Q96GT9 111 aa8.54□□□□□ -1.04
MSL3-216ENST00000483645 ZSCAN10Q96SZ4 725 aaPredicted RBP8.54□□□□□ -1.04
MSL3-216ENST00000483645 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 GDF10P55107 478 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 CENPCQ03188 943 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 TMEM214Q6NUQ4 689 aaKnown RBP8.53□□□□□ -1.04
MSL3-216ENST00000483645 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 GRIP2Q9C0E4 1043 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
MSL3-216ENST00000483645 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 RHOQP17081 205 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 GTF2IP78347 998 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 TLR1Q15399 786 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 TAS1R3Q7RTX0 852 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 UCN2Q96RP3 112 aa8.52□□□□□ -1.05
MSL3-216ENST00000483645 SPATA31C2B4DYI2 1134 aa8.51□□□□□ -1.05
MSL3-216ENST00000483645 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
MSL3-216ENST00000483645 INHAP05111 366 aa8.51□□□□□ -1.05
MSL3-216ENST00000483645 POU4F2Q12837 409 aa8.51□□□□□ -1.05
MSL3-216ENST00000483645 WDR44Q5JSH3 913 aa8.51□□□□□ -1.05
MSL3-216ENST00000483645 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
MSL3-216ENST00000483645 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
MSL3-216ENST00000483645 ZNF777Q9ULD5 760 aaPredicted RBP8.51□□□□□ -1.05
MSL3-216ENST00000483645 BACH1O14867 736 aa8.5□□□□□ -1.05
MSL3-216ENST00000483645 ITGA6P23229 1130 aa8.5□□□□□ -1.05
MSL3-216ENST00000483645 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
MSL3-216ENST00000483645 RBM19Q9Y4C8 960 aaKnown RBP8.5□□□□□ -1.05
MSL3-216ENST00000483645 CDC14CA4D256 554 aa8.49□□□□□ -1.05
MSL3-216ENST00000483645 SCNN1DP51172 638 aa8.49□□□□□ -1.05
MSL3-216ENST00000483645 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms