RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 EML3Q32P44 896 aa10.89□□□□□ -0.67
PMS1-219ENST00000483293 SEPT12Q8IYM1 358 aa10.89□□□□□ -0.67
PMS1-219ENST00000483293 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
PMS1-219ENST00000483293 FAM181BA6NEQ2 426 aa10.88□□□□□ -0.67
PMS1-219ENST00000483293 SMPD1P17405 629 aa10.88□□□□□ -0.67
PMS1-219ENST00000483293 SCTRP47872 440 aa10.88□□□□□ -0.67
PMS1-219ENST00000483293 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
PMS1-219ENST00000483293 ESF1Q9H501 851 aaKnown RBP10.88□□□□□ -0.67
PMS1-219ENST00000483293 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
PMS1-219ENST00000483293 CHIC2Q9UKJ5 165 aa10.88□□□□□ -0.67
PMS1-219ENST00000483293 ZNF784Q8NCA9 323 aaPredicted RBP10.87□□□□□ -0.67
PMS1-219ENST00000483293 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
PMS1-219ENST00000483293 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
PMS1-219ENST00000483293 HPS1Q92902 700 aa10.86□□□□□ -0.67
PMS1-219ENST00000483293 PBXIP1Q96AQ6 731 aa10.86□□□□□ -0.67
PMS1-219ENST00000483293 USP4Q13107 963 aa10.85□□□□□ -0.67
PMS1-219ENST00000483293 PLEKHM2Q8IWE5 1019 aa10.85□□□□□ -0.67
PMS1-219ENST00000483293 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
PMS1-219ENST00000483293 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
PMS1-219ENST00000483293 WDR4P57081 412 aaKnown RBP10.84□□□□□ -0.67
PMS1-219ENST00000483293 ITPKCQ96DU7 683 aa10.84□□□□□ -0.67
PMS1-219ENST00000483293 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
PMS1-219ENST00000483293 ATP13A2Q9NQ11 1180 aa10.84□□□□□ -0.67
PMS1-219ENST00000483293 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
PMS1-219ENST00000483293 ZIC2O95409 532 aaPredicted RBP10.83□□□□□ -0.68
PMS1-219ENST00000483293 RASA1P20936 1047 aa10.83□□□□□ -0.68
PMS1-219ENST00000483293 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
PMS1-219ENST00000483293 SRPK2P78362 688 aaKnown RBP10.83□□□□□ -0.68
PMS1-219ENST00000483293 CBLBQ13191 982 aa10.83□□□□□ -0.68
PMS1-219ENST00000483293 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
PMS1-219ENST00000483293 PGPEP1Q9NXJ5 209 aa10.83□□□□□ -0.68
PMS1-219ENST00000483293 EMILIN1Q9Y6C2 1016 aa10.83□□□□□ -0.68
PMS1-219ENST00000483293 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
PMS1-219ENST00000483293 GTF2IP78347 998 aa10.82□□□□□ -0.68
PMS1-219ENST00000483293 PSME1Q06323 249 aa10.82□□□□□ -0.68
PMS1-219ENST00000483293 CC2D2BQ6DHV5 1058 aa10.82□□□□□ -0.68
PMS1-219ENST00000483293 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
PMS1-219ENST00000483293 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
PMS1-219ENST00000483293 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
PMS1-219ENST00000483293 LILRA1O75019 489 aa10.81□□□□□ -0.68
PMS1-219ENST00000483293 LARP1Q6PKG0 1096 aaKnown RBP10.81□□□□□ -0.68
PMS1-219ENST00000483293 ZSCAN1Q8NBB4 408 aa10.81□□□□□ -0.68
PMS1-219ENST00000483293 ATP5J2-PTCD1G3V325 749 aa10.8□□□□□ -0.68
PMS1-219ENST00000483293 ERVK-9P63128 1117 aa10.8□□□□□ -0.68
PMS1-219ENST00000483293 CLDN10P78369 228 aa10.8□□□□□ -0.68
PMS1-219ENST00000483293 CRTC2Q53ET0 693 aaPredicted RBP10.8□□□□□ -0.68
PMS1-219ENST00000483293 CARNS1A5YM72 827 aa10.79□□□□□ -0.68
PMS1-219ENST00000483293 CCDC125Q86Z20 511 aa10.79□□□□□ -0.68
PMS1-219ENST00000483293 SIRT1Q96EB6 747 aa10.79□□□□□ -0.68
PMS1-219ENST00000483293 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
PMS1-219ENST00000483293 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
PMS1-219ENST00000483293 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
PMS1-219ENST00000483293 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
PMS1-219ENST00000483293 PPP1R15AO75807 674 aaPredicted RBP10.78□□□□□ -0.68
PMS1-219ENST00000483293 TIMP2P16035 220 aa10.78□□□□□ -0.68
PMS1-219ENST00000483293 GMPRP36959 345 aa10.78□□□□□ -0.68
PMS1-219ENST00000483293 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
PMS1-219ENST00000483293 KLF16Q9BXK1 252 aaPredicted RBP10.78□□□□□ -0.68
PMS1-219ENST00000483293 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
PMS1-219ENST00000483293 PCDHGA11Q9Y5H2 935 aa10.78□□□□□ -0.68
PMS1-219ENST00000483293 USP17L15C9J2P7 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L13C9JLJ4 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L11C9JVI0 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L21D6R901 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L18D6R9N7 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L22D6RA61 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L17D6RBQ6 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L19D6RCP7 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L20D6RJB6 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 LGR5O75473 907 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 ATP1A2P50993 1020 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 RELBQ01201 579 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 USP17L24Q0WX57 530 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 RAB6BQ9NRW1 208 aa10.76□□□□□ -0.69
PMS1-219ENST00000483293 CAPN5O15484 640 aaPredicted RBP10.75□□□□□ -0.69
PMS1-219ENST00000483293 DPYDQ12882 1025 aa10.75□□□□□ -0.69
PMS1-219ENST00000483293 PTK7Q13308 1070 aa10.75□□□□□ -0.69
PMS1-219ENST00000483293 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
PMS1-219ENST00000483293 RETREG2Q8NC44 543 aa10.75□□□□□ -0.69
PMS1-219ENST00000483293 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
PMS1-219ENST00000483293 ZNF395Q9H8N7 513 aaPredicted RBP10.75□□□□□ -0.69
PMS1-219ENST00000483293 SENP2Q9HC62 589 aa10.75□□□□□ -0.69
PMS1-219ENST00000483293 NOVA2Q9UNW9 492 aaKnown RBP10.75□□□□□ -0.69
PMS1-219ENST00000483293 SFI1A8K8P3 1242 aa10.74□□□□□ -0.69
PMS1-219ENST00000483293 ATG7O95352 703 aa10.74□□□□□ -0.69
PMS1-219ENST00000483293 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
PMS1-219ENST00000483293 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
PMS1-219ENST00000483293 SERTAD1Q9UHV2 236 aa10.74□□□□□ -0.69
PMS1-219ENST00000483293 CSB-PGBD3P0DP91 1061 aa10.73□□□□□ -0.69
PMS1-219ENST00000483293 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
PMS1-219ENST00000483293 STK32AQ8WU08 396 aa10.73□□□□□ -0.69
PMS1-219ENST00000483293 ARXQ96QS3 562 aa10.73□□□□□ -0.69
PMS1-219ENST00000483293 RBM19Q9Y4C8 960 aaKnown RBP10.73□□□□□ -0.69
PMS1-219ENST00000483293 FAM196BA6NMK8 535 aa10.72□□□□□ -0.69
PMS1-219ENST00000483293 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
PMS1-219ENST00000483293 LARGE2Q8N3Y3 721 aa10.72□□□□□ -0.69
PMS1-219ENST00000483293 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
PMS1-219ENST00000483293 ARHGEF10LQ9HCE6 1279 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms