RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CC2D1BQ5T0F9 858 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-206ENST00000482632 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
SPTLC1-206ENST00000482632 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
SPTLC1-206ENST00000482632 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
SPTLC1-206ENST00000482632 ERBB3P21860 1342 aa13.64□□□□□ -0.23
SPTLC1-206ENST00000482632 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
SPTLC1-206ENST00000482632 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
SPTLC1-206ENST00000482632 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
SPTLC1-206ENST00000482632 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-206ENST00000482632 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
SPTLC1-206ENST00000482632 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
SPTLC1-206ENST00000482632 FLT4P35916 1363 aa13.62□□□□□ -0.23
SPTLC1-206ENST00000482632 CARD10Q9BWT7 1032 aa13.62□□□□□ -0.23
SPTLC1-206ENST00000482632 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
SPTLC1-206ENST00000482632 ONECUT3O60422 494 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-206ENST00000482632 DDB1Q16531 1140 aa13.6□□□□□ -0.23
SPTLC1-206ENST00000482632 HSP90AB2PQ58FF8 381 aa13.6□□□□□ -0.23
SPTLC1-206ENST00000482632 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-206ENST00000482632 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
SPTLC1-206ENST00000482632 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
SPTLC1-206ENST00000482632 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1-206ENST00000482632 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
SPTLC1-206ENST00000482632 INSRP06213 1382 aa13.58□□□□□ -0.24
SPTLC1-206ENST00000482632 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
SPTLC1-206ENST00000482632 IL2RBP14784 551 aa13.57□□□□□ -0.24
SPTLC1-206ENST00000482632 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
SPTLC1-206ENST00000482632 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
SPTLC1-206ENST00000482632 EXOC5O00471 708 aa13.56□□□□□ -0.24
SPTLC1-206ENST00000482632 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-206ENST00000482632 HAX1O00165 279 aa13.55□□□□□ -0.24
SPTLC1-206ENST00000482632 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
SPTLC1-206ENST00000482632 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
SPTLC1-206ENST00000482632 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
SPTLC1-206ENST00000482632 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
SPTLC1-206ENST00000482632 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
SPTLC1-206ENST00000482632 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
SPTLC1-206ENST00000482632 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
SPTLC1-206ENST00000482632 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
SPTLC1-206ENST00000482632 TRIM37O94972 964 aa13.53□□□□□ -0.24
SPTLC1-206ENST00000482632 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
SPTLC1-206ENST00000482632 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 EIF4A2Q14240 407 aaKnown RBP13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 MEGF6O75095 1541 aa13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 TNS1Q9HBL0 1735 aaKnown RBP13.52□□□□□ -0.25
SPTLC1-206ENST00000482632 BAG6P46379 1132 aa13.51□□□□□ -0.25
SPTLC1-206ENST00000482632 MTHFSP49914 203 aa13.51□□□□□ -0.25
SPTLC1-206ENST00000482632 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
SPTLC1-206ENST00000482632 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
SPTLC1-206ENST00000482632 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
SPTLC1-206ENST00000482632 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
SPTLC1-206ENST00000482632 EYA1Q99502 592 aa13.5□□□□□ -0.25
SPTLC1-206ENST00000482632 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
SPTLC1-206ENST00000482632 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
SPTLC1-206ENST00000482632 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
SPTLC1-206ENST00000482632 APBA3O96018 575 aa13.48□□□□□ -0.25
SPTLC1-206ENST00000482632 MIER1Q8N108 512 aa13.48□□□□□ -0.25
SPTLC1-206ENST00000482632 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
SPTLC1-206ENST00000482632 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1-206ENST00000482632 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
SPTLC1-206ENST00000482632 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
SPTLC1-206ENST00000482632 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
SPTLC1-206ENST00000482632 SYTL4Q96C24 671 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1-206ENST00000482632 CFAP53Q96M91 514 aa13.46□□□□□ -0.25
SPTLC1-206ENST00000482632 PKD1L3Q7Z443 1732 aa13.46□□□□□ -0.25
SPTLC1-206ENST00000482632 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
SPTLC1-206ENST00000482632 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-206ENST00000482632 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 BTAF1O14981 1849 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 SPG7Q9UQ90 795 aa13.44□□□□□ -0.26
SPTLC1-206ENST00000482632 HMOX1P09601 288 aa13.43□□□□□ -0.26
SPTLC1-206ENST00000482632 IL13P35225 146 aa13.43□□□□□ -0.26
SPTLC1-206ENST00000482632 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
SPTLC1-206ENST00000482632 NCAPD2Q15021 1401 aa13.42□□□□□ -0.26
SPTLC1-206ENST00000482632 KCNQ2O43526 872 aa13.42□□□□□ -0.26
SPTLC1-206ENST00000482632 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
SPTLC1-206ENST00000482632 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
SPTLC1-206ENST00000482632 SPOCK2Q92563 424 aa13.42□□□□□ -0.26
SPTLC1-206ENST00000482632 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
SPTLC1-206ENST00000482632 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
SPTLC1-206ENST00000482632 LRP5O75197 1615 aa13.41□□□□□ -0.26
SPTLC1-206ENST00000482632 ITGB4P16144 1822 aa13.41□□□□□ -0.26
SPTLC1-206ENST00000482632 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-206ENST00000482632 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-206ENST00000482632 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
SPTLC1-206ENST00000482632 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
SPTLC1-206ENST00000482632 BCL9O00512 1426 aa13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 NUP188Q5SRE5 1749 aa13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 VIRMAQ69YN4 1812 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 CYP27B1O15528 508 aa13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 RREB1Q92766 1687 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms