RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 AMHR2Q16671 573 aa5.43□□□□□ -1.54
USH2A-204ENST00000481786 SLC10A4Q96EP9 437 aa5.43□□□□□ -1.54
USH2A-204ENST00000481786 ARHGAP9Q9BRR9 750 aa5.43□□□□□ -1.54
USH2A-204ENST00000481786 DHX9Q08211 1270 aaKnown RBP5.42□□□□□ -1.54
USH2A-204ENST00000481786 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
USH2A-204ENST00000481786 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
USH2A-204ENST00000481786 CTDSPL2Q05D32 466 aa5.41□□□□□ -1.54
USH2A-204ENST00000481786 PARP9Q8IXQ6 854 aa5.41□□□□□ -1.54
USH2A-204ENST00000481786 C1QTNF9BB2RNN3 333 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 ERVH48-1M5A8F1 160 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 HOXB4P17483 251 aaPredicted RBP5.4□□□□□ -1.54
USH2A-204ENST00000481786 MX2P20592 715 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 MYSM1Q5VVJ2 828 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 PDXDC2PQ6P474 469 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 ZBTB33Q86T24 672 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 LRRN4Q8WUT4 740 aa5.4□□□□□ -1.54
USH2A-204ENST00000481786 GAS2L1Q99501 681 aaPredicted RBP5.4□□□□□ -1.54
USH2A-204ENST00000481786 GRIN2CQ14957 1233 aa5.39□□□□□ -1.55
USH2A-204ENST00000481786 DIXDC1Q155Q3 683 aa5.39□□□□□ -1.55
USH2A-204ENST00000481786 CD163Q86VB7 1156 aa5.39□□□□□ -1.55
USH2A-204ENST00000481786 ZC3H15Q8WU90 426 aaKnown RBP5.39□□□□□ -1.55
USH2A-204ENST00000481786 GPKOWQ92917 476 aaPredicted RBP eCLIP5.39□□□□□ -1.55
USH2A-204ENST00000481786 BCANQ96GW7 911 aa5.39□□□□□ -1.55
USH2A-204ENST00000481786 RRAGCQ9HB90 399 aa5.39□□□□□ -1.55
USH2A-204ENST00000481786 THBS1P07996 1170 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 CHRNA4P43681 627 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 RNF144AP50876 292 aaPredicted RBP5.38□□□□□ -1.55
USH2A-204ENST00000481786 POU4F2Q12837 409 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 DOC2BQ14184 412 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 FOXR1Q6PIV2 292 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 LINC00114Q6XXX2 140 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 OXCT2Q9BYC2 517 aaPredicted RBP5.38□□□□□ -1.55
USH2A-204ENST00000481786 SEMA6BQ9H3T3 888 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 CYLDQ9NQC7 956 aa5.38□□□□□ -1.55
USH2A-204ENST00000481786 ZMYND10O75800 440 aa5.37□□□□□ -1.55
USH2A-204ENST00000481786 NR6A1Q15406 480 aa5.37□□□□□ -1.55
USH2A-204ENST00000481786 FOXD4L6Q3SYB3 417 aaPredicted RBP5.37□□□□□ -1.55
USH2A-204ENST00000481786 FOXD4L3Q6VB84 417 aaPredicted RBP5.37□□□□□ -1.55
USH2A-204ENST00000481786 HELBQ8NG08 1087 aaPredicted RBP5.37□□□□□ -1.55
USH2A-204ENST00000481786 ADAM32Q8TC27 787 aa5.37□□□□□ -1.55
USH2A-204ENST00000481786 FKBPLQ9UIM3 349 aa5.37□□□□□ -1.55
USH2A-204ENST00000481786 CDV3Q9UKY7 258 aaKnown RBP5.37□□□□□ -1.55
USH2A-204ENST00000481786 MKL2Q9ULH7 1088 aa5.37□□□□□ -1.55
USH2A-204ENST00000481786 ZMYM1Q5SVZ6 1142 aa5.36□□□□□ -1.55
USH2A-204ENST00000481786 FBXO31Q5XUX0 539 aaPredicted RBP5.36□□□□□ -1.55
USH2A-204ENST00000481786 KLRG1Q96E93 195 aa5.36□□□□□ -1.55
USH2A-204ENST00000481786 GMCL1Q96IK5 515 aa5.36□□□□□ -1.55
USH2A-204ENST00000481786 TRERF1Q96PN7 1200 aa5.36□□□□□ -1.55
USH2A-204ENST00000481786 LRRC4BQ9NT99 713 aa5.36□□□□□ -1.55
USH2A-204ENST00000481786 MEN1O00255 615 aa5.35□□□□□ -1.55
USH2A-204ENST00000481786 DYRK1BQ9Y463 629 aa5.35□□□□□ -1.55
USH2A-204ENST00000481786 EPS8L1Q8TE68 723 aa5.34□□□□□ -1.55
USH2A-204ENST00000481786 EDARADDQ8WWZ3 215 aa5.34□□□□□ -1.55
USH2A-204ENST00000481786 A0A1W2PRU2 124 aa5.33□□□□□ -1.56
USH2A-204ENST00000481786 H7C1W4 665 aa5.33□□□□□ -1.56
USH2A-204ENST00000481786 TRIM66O15016 1216 aa5.33□□□□□ -1.56
USH2A-204ENST00000481786 TUSC1Q2TAM9 212 aa5.33□□□□□ -1.56
USH2A-204ENST00000481786 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
USH2A-204ENST00000481786 NUCKS1Q9H1E3 243 aaKnown RBP5.33□□□□□ -1.56
USH2A-204ENST00000481786 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
USH2A-204ENST00000481786 C2CD2LO14523 706 aa5.32□□□□□ -1.56
USH2A-204ENST00000481786 PTK2Q05397 1052 aa5.32□□□□□ -1.56
USH2A-204ENST00000481786 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
USH2A-204ENST00000481786 NBPF15Q8N660 670 aa5.32□□□□□ -1.56
USH2A-204ENST00000481786 POLR3EQ9NVU0 708 aa5.32□□□□□ -1.56
USH2A-204ENST00000481786 ESPNB1AK53 854 aa5.31□□□□□ -1.56
USH2A-204ENST00000481786 ATP5J2-PTCD1G3V325 749 aa5.31□□□□□ -1.56
USH2A-204ENST00000481786 MAP2K3P46734 347 aa5.31□□□□□ -1.56
USH2A-204ENST00000481786 NBPF20Q3BBV1 942 aa5.31□□□□□ -1.56
USH2A-204ENST00000481786 NSFL1CQ9UNZ2 370 aaKnown RBP5.31□□□□□ -1.56
USH2A-204ENST00000481786 AMPD1P23109 780 aa5.3□□□□□ -1.56
USH2A-204ENST00000481786 UBAP2LQ14157 1087 aaKnown RBP5.3□□□□□ -1.56
USH2A-204ENST00000481786 SLC27A3Q5K4L6 730 aa5.3□□□□□ -1.56
USH2A-204ENST00000481786 ALYREFQ86V81 257 aaKnown RBP5.3□□□□□ -1.56
USH2A-204ENST00000481786 DZIP3Q86Y13 1208 aaKnown RBP5.3□□□□□ -1.56
USH2A-204ENST00000481786 GRIP2Q9C0E4 1043 aa5.3□□□□□ -1.56
USH2A-204ENST00000481786 GPAMQ9HCL2 828 aa5.3□□□□□ -1.56
USH2A-204ENST00000481786 SCO2A0A1W2PP80 73 aa5.29□□□□□ -1.56
USH2A-204ENST00000481786 F11P03951 625 aa5.29□□□□□ -1.56
USH2A-204ENST00000481786 CLK2P49760 499 aaKnown RBP5.29□□□□□ -1.56
USH2A-204ENST00000481786 TIMMDC1Q9NPL8 285 aa5.29□□□□□ -1.56
USH2A-204ENST00000481786 GGA1Q9UJY5 639 aa5.29□□□□□ -1.56
USH2A-204ENST00000481786 GIGYF1O75420 1035 aaPredicted RBP5.28□□□□□ -1.56
USH2A-204ENST00000481786 GPC1P35052 558 aa5.28□□□□□ -1.56
USH2A-204ENST00000481786 BTBD6Q96KE9 485 aa5.28□□□□□ -1.56
USH2A-204ENST00000481786 CFHR5Q9BXR6 569 aa5.28□□□□□ -1.56
USH2A-204ENST00000481786 HMX1Q9NP08 348 aaPredicted RBP5.28□□□□□ -1.56
USH2A-204ENST00000481786 GNB5O14775 395 aa5.27□□□□□ -1.57
USH2A-204ENST00000481786 PHKA2P46019 1235 aa5.27□□□□□ -1.57
USH2A-204ENST00000481786 CTBSQ01459 385 aa5.27□□□□□ -1.57
USH2A-204ENST00000481786 RSPO4Q2I0M5 234 aaPredicted RBP5.27□□□□□ -1.57
USH2A-204ENST00000481786 AK7Q96M32 723 aa5.27□□□□□ -1.57
USH2A-204ENST00000481786 SLC24A3Q9HC58 644 aa5.27□□□□□ -1.57
USH2A-204ENST00000481786 GDF2Q9UK05 429 aaPredicted RBP5.27□□□□□ -1.57
USH2A-204ENST00000481786 ZC3H4Q9UPT8 1303 aaKnown RBP5.26□□□□□ -1.57
USH2A-204ENST00000481786 SPATA31C2B4DYI2 1134 aa5.26□□□□□ -1.57
USH2A-204ENST00000481786 SCTRP47872 440 aa5.26□□□□□ -1.57
USH2A-204ENST00000481786 DGKGP49619 791 aa5.26□□□□□ -1.57
USH2A-204ENST00000481786 ABHD17AQ96GS6 310 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms