RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
RXRA-202ENST00000481739 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
RXRA-202ENST00000481739 KDRP35968 1356 aa20.19■□□□□ 0.82
RXRA-202ENST00000481739 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
RXRA-202ENST00000481739 NBPF6Q5VWK0 638 aa20.18■□□□□ 0.82
RXRA-202ENST00000481739 NBPF4Q96M43 638 aa20.18■□□□□ 0.82
RXRA-202ENST00000481739 PRDM11Q9NQV5 511 aa20.18■□□□□ 0.82
RXRA-202ENST00000481739 CPDO75976 1380 aa20.18■□□□□ 0.82
RXRA-202ENST00000481739 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
RXRA-202ENST00000481739 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
RXRA-202ENST00000481739 ABCA3Q99758 1704 aa20.17■□□□□ 0.82
RXRA-202ENST00000481739 RGPD2P0DJD1 1756 aa20.17■□□□□ 0.82
RXRA-202ENST00000481739 PANK1Q8TE04 598 aa20.17■□□□□ 0.82
RXRA-202ENST00000481739 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
RXRA-202ENST00000481739 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
RXRA-202ENST00000481739 FTSJ3Q8IY81 847 aaKnown RBP20.16■□□□□ 0.82
RXRA-202ENST00000481739 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
RXRA-202ENST00000481739 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
RXRA-202ENST00000481739 COL18A1P39060 1754 aa20.15■□□□□ 0.82
RXRA-202ENST00000481739 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
RXRA-202ENST00000481739 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.82
RXRA-202ENST00000481739 MVPQ14764 893 aaKnown RBP20.14■□□□□ 0.81
RXRA-202ENST00000481739 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
RXRA-202ENST00000481739 ERBB3P21860 1342 aa20.14■□□□□ 0.81
RXRA-202ENST00000481739 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
RXRA-202ENST00000481739 COL16A1Q07092 1604 aaPredicted RBP20.12■□□□□ 0.81
RXRA-202ENST00000481739 ABCC6O95255 1503 aa20.12■□□□□ 0.81
RXRA-202ENST00000481739 RLBP1P12271 317 aa20.11■□□□□ 0.81
RXRA-202ENST00000481739 DDX19BQ9UMR2 479 aa20.11■□□□□ 0.81
RXRA-202ENST00000481739 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
RXRA-202ENST00000481739 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
RXRA-202ENST00000481739 ARHGAP45Q92619 1136 aa20.11■□□□□ 0.81
RXRA-202ENST00000481739 MBIPQ9NS73 344 aa20.11■□□□□ 0.81
RXRA-202ENST00000481739 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
RXRA-202ENST00000481739 TRIM27P14373 513 aa20.1■□□□□ 0.81
RXRA-202ENST00000481739 COL22A1Q8NFW1 1626 aaPredicted RBP20.1■□□□□ 0.81
RXRA-202ENST00000481739 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
RXRA-202ENST00000481739 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
RXRA-202ENST00000481739 VAMP4O75379 141 aa20.09■□□□□ 0.81
RXRA-202ENST00000481739 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
RXRA-202ENST00000481739 FAM83GA6ND36 823 aa20.08■□□□□ 0.8
RXRA-202ENST00000481739 NOB1Q9ULX3 412 aaKnown RBP20.07■□□□□ 0.8
RXRA-202ENST00000481739 EVA1CP58658 441 aa20.06■□□□□ 0.8
RXRA-202ENST00000481739 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
RXRA-202ENST00000481739 RTF1Q92541 710 aaKnown RBP20.06■□□□□ 0.8
RXRA-202ENST00000481739 FAM208AQ9UK61 1670 aaKnown RBP20.06■□□□□ 0.8
RXRA-202ENST00000481739 CAMTA1Q9Y6Y1 1673 aa20.06■□□□□ 0.8
RXRA-202ENST00000481739 PDE4AP27815 886 aa20.06■□□□□ 0.8
RXRA-202ENST00000481739 TWISTNBQ3B726 338 aaPredicted RBP20.06■□□□□ 0.8
RXRA-202ENST00000481739 BACH2Q9BYV9 841 aa20.06■□□□□ 0.8
RXRA-202ENST00000481739 STRN4Q9NRL3 753 aa20.06■□□□□ 0.8
RXRA-202ENST00000481739 LMO7Q8WWI1 1683 aa20.05■□□□□ 0.8
RXRA-202ENST00000481739 NUTM2BA6NNL0 878 aaPredicted RBP20.05■□□□□ 0.8
RXRA-202ENST00000481739 NUTM2EB1AL46 878 aaPredicted RBP20.05■□□□□ 0.8
RXRA-202ENST00000481739 CHL1O00533 1208 aa20.05■□□□□ 0.8
RXRA-202ENST00000481739 NUTM2AQ8IVF1 878 aaPredicted RBP20.05■□□□□ 0.8
RXRA-202ENST00000481739 RWDD1Q9H446 243 aaPredicted RBP20.05■□□□□ 0.8
RXRA-202ENST00000481739 PLEKHO1Q53GL0 409 aaPredicted RBP20.04■□□□□ 0.8
RXRA-202ENST00000481739 TOM1L2Q6ZVM7 507 aa20.04■□□□□ 0.8
RXRA-202ENST00000481739 MCM10Q7L590 875 aa20.04■□□□□ 0.8
RXRA-202ENST00000481739 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
RXRA-202ENST00000481739 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
RXRA-202ENST00000481739 WDR17Q8IZU2 1322 aa20.03■□□□□ 0.8
RXRA-202ENST00000481739 ADAMTS2O95450 1211 aa20.03■□□□□ 0.8
RXRA-202ENST00000481739 MRPL50Q8N5N7 158 aaKnown RBP20.03■□□□□ 0.8
RXRA-202ENST00000481739 TNNQ9UQP3 1299 aa20.03■□□□□ 0.8
RXRA-202ENST00000481739 CRB1P82279 1406 aa20.03■□□□□ 0.8
RXRA-202ENST00000481739 COL5A2P05997 1499 aaPredicted RBP20.03■□□□□ 0.8
RXRA-202ENST00000481739 GNAT3A8MTJ3 354 aa20.02■□□□□ 0.8
RXRA-202ENST00000481739 IGHDP01880 384 aa20.02■□□□□ 0.8
RXRA-202ENST00000481739 ANP32AP39687 249 aaKnown RBP20.02■□□□□ 0.8
RXRA-202ENST00000481739 BTG4Q9NY30 223 aa20.02■□□□□ 0.8
RXRA-202ENST00000481739 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.79
RXRA-202ENST00000481739 AMOTQ4VCS5 1084 aa20.02■□□□□ 0.79
RXRA-202ENST00000481739 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.79
RXRA-202ENST00000481739 COL14A1Q05707 1796 aaKnown RBP20.01■□□□□ 0.79
RXRA-202ENST00000481739 ZNF530Q6P9A1 599 aaPredicted RBP20.01■□□□□ 0.79
RXRA-202ENST00000481739 MAP3K5Q99683 1374 aa20■□□□□ 0.79
RXRA-202ENST00000481739 TSPYL6Q8N831 410 aa20■□□□□ 0.79
RXRA-202ENST00000481739 API5Q9BZZ5 524 aaKnown RBP20■□□□□ 0.79
RXRA-202ENST00000481739 PCDHB15Q9Y5E8 787 aa20■□□□□ 0.79
RXRA-202ENST00000481739 HDAC1Q13547 482 aaPredicted RBP19.99■□□□□ 0.79
RXRA-202ENST00000481739 BABAM1Q9NWV8 329 aa19.99■□□□□ 0.79
RXRA-202ENST00000481739 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
RXRA-202ENST00000481739 TMEM57Q8N5G2 664 aa19.99■□□□□ 0.79
RXRA-202ENST00000481739 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
RXRA-202ENST00000481739 C1orf141Q5JVX7 400 aa19.98■□□□□ 0.79
RXRA-202ENST00000481739 LRRC37A3O60309 1634 aa19.98■□□□□ 0.79
RXRA-202ENST00000481739 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
RXRA-202ENST00000481739 JCADQ9P266 1359 aa19.98■□□□□ 0.79
RXRA-202ENST00000481739 FAM161AQ3B820 660 aa19.97■□□□□ 0.79
RXRA-202ENST00000481739 ZBTB40Q9NUA8 1239 aa19.97■□□□□ 0.79
RXRA-202ENST00000481739 ABCC4O15439 1325 aa19.97■□□□□ 0.79
RXRA-202ENST00000481739 AKAP4Q5JQC9 854 aa19.96■□□□□ 0.79
RXRA-202ENST00000481739 CARD10Q9BWT7 1032 aa19.96■□□□□ 0.79
RXRA-202ENST00000481739 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
RXRA-202ENST00000481739 MEGF6O75095 1541 aa19.96■□□□□ 0.79
RXRA-202ENST00000481739 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
RXRA-202ENST00000481739 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
RXRA-202ENST00000481739 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms